Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4047g00021 ATGAAAGGGAAGCACTCGGGGCTGTTCCAGTTTCATATTTTTCTTCTTCTTATCACAATCCAAGCATGTATATCCGGTGGATCAGACACCTTATATGCAGGGAAATCTCTTTCAGGGAATGGCACCATAATATCAAAAGGAGGAGTATTTGAAATGGGTTTCTTTTCCCCTGCTTCTAACTCCAAGTACTACTTGGGCATATGGTACAAAGGCCTTCCCATGCCACAGAAAACAGTGGTTTGGGTTGCCAACAGGGAGCAACCTGTCTCCGATCTAACTTCTGCGTCCTTGGAATTTCGTGATGGTGGCACCTTGGTTCTTCACGCCACGTCTGGCAAAATATTCTGGAGCGTTCATTTGGATTTTGGCAGGCCTCTTCCAAATGTTACGGTAGGTGTTCTTGGTGATGATGGAAATTTCATTATTAGAGAGAGTTTCAATTCGTCCACCATATTATGGCGAAGTTTCGACTATCCCACGGATACTCTCCTGCCCGGTGCATATAGATTCGACTCAATAGTATTGGCATCCTGGAAAAATCCAAATGACCCTTCTTCTGGAACCTCCTATGCTTATGTCCATATCAGCTATGGTTTTGCTATGATTGGGATATCTCAAGATGGGACTTATACGCTGAGCAACCGTTACACTATAGCTACGTCCTTCGACCCCGATCATGTGATATTATCTGTTAGGCCGCGCTACCAAGATGGTCTGTTCAGATATGTGTTGGATGCAGATGGGCAGCTCAAGCTATTTGGTTGGTGGAATGGTTTGCAACATTGGAAATTGATCCTTCTTTTATCACAGCACTTCCCTAGTCCCTGTTCCTCCTGTGGTGAGTTTACTATTTGCAATCCCAATGACACGATCCCTTGCCATTGCATCAGAGGATTTGTTCCAATTAATCAGCACGACTGGGATTCAGGGAATTATGAATGCGTTTTGAAGATATCTCGATATTGCTTCAACCGCACAAAAGACAAGTTTTTTATTATTCCCAATGCAAGCTATCCATCGGAACCACAACTTTCGGGAGCCAATAATTCTGATCAGTGTCGATTGGCATGCTTAGAAGATTGTCGTTGTGTTGCATATGCATACGAATATGACCTATGCTTCACTTGGCAAGAATTGTTCTCATATATTCCGGAACTCTCATCAGAATTAAAACTAGGGGGAGATTTTTATGTTAGAGTTGCGGCATCTGAAATAGAGGGTAGTGGGAATAAGAGTCATGCCTGGAATTGGTGGCCTATTCTTATGTCTCTTGCTGGCATTGGCGTTGTTGTGATGTTGATAATTATGTGGACCAAACTGCATGGTTGTGGAGGTTCCTTGGAGACGATGGGCGGTTCTCTGATGCATTTCAATTACCGAGATTTGAAAAAGGCGACAAGGAACTTCACACAGGAACTCGGAGAAGGCGGTTTCAGTACTGTTTACAGAGGCGAATTCCCAAATTCGACTTTGGTTGCGGTGAAGCAACTTAAAGGTCAAATGCATGAAGAGAAACAGCTTCGTGCAGAAGTGAGCACTATCGGAATAATTCAGCACAGAAATCTGATTCGCTTAAGAGGCTTCTGTTTAGAAAAATCCAAAAGATACCTGGTTTATGATTACATGCCAAATGGGTCTCTAGAATTTCGTCTATTTAAAAAGAGTAACGAGATTTTGAATTGGGCAAAGAGACTCACAATTGCACTTGGAACTGCTAGAGGATTGGCTTACTTGCATGACTCGTGCATAGAGTGCATCATCCATTGTGACGTCAAACCAGAGAACATTTTGTTAGATGCCGACTTTGAACCGAAAGTTGCTGATTTTGGGCTTGCGAAGCTCTTAGGTCGAAACTTCAGCCGTGTTCTGACCACCATGAGGGGTACCAGAGGATACCTTGCACCCGAATGGTTTTCCGGTGAAGCAATCACTCCAAAAGTTGATGTATATAGCTACGGTCAAGTGCTTTTTGAGATCATTTCTGGTAGAAGGAACATGGACATGCCAAATGATGAGTTAAGTGACTATTTTCCAATGCTGGTATTGAATGCACTAAACAACGGAGTAGAACTAATGACATTGGCAGATCCTAAATTGGAGGGTGAAGTGAATAAAGAAGAGTTGACAAGAGCATGCAAGGTTGCTTGTTGGTGCATTCAAGATCATGAACAAGATAGACCAACAATGGCTCAAGTGATTCAAATTTTGGAAGGAGTGCTTCAGGTAGACGTGCCTCCAATTCCACAGTTTTTTCGATCCCTTGCGAAAGGTTCCGCAAAAACAAGTCGTGTGGAGACAAGTGAGGCTTACAGTACCTCGAATTCGTCACCTTACAGTTTCAGCTTTCAACCACCAGTGAATCCTATCCATTCTGTCATACCATAA 2385 0.4302 MKGKHSGLFQFHIFLLLITIQACISGGSDTLYAGKSLSGNGTIISKGGVFEMGFFSPASNSKYYLGIWYKGLPMPQKTVVWVANREQPVSDLTSASLEFRDGGTLVLHATSGKIFWSVHLDFGRPLPNVTVGVLGDDGNFIIRESFNSSTILWRSFDYPTDTLLPGAYRFDSIVLASWKNPNDPSSGTSYAYVHISYGFAMIGISQDGTYTLSNRYTIATSFDPDHVILSVRPRYQDGLFRYVLDADGQLKLFGWWNGLQHWKLILLLSQHFPSPCSSCGEFTICNPNDTIPCHCIRGFVPINQHDWDSGNYECVLKISRYCFNRTKDKFFIIPNASYPSEPQLSGANNSDQCRLACLEDCRCVAYAYEYDLCFTWQELFSYIPELSSELKLGGDFYVRVAASEIEGSGNKSHAWNWWPILMSLAGIGVVVMLIIMWTKLHGCGGSLETMGGSLMHFNYRDLKKATRNFTQELGEGGFSTVYRGEFPNSTLVAVKQLKGQMHEEKQLRAEVSTIGIIQHRNLIRLRGFCLEKSKRYLVYDYMPNGSLEFRLFKKSNEILNWAKRLTIALGTARGLAYLHDSCIECIIHCDVKPENILLDADFEPKVADFGLAKLLGRNFSRVLTTMRGTRGYLAPEWFSGEAITPKVDVYSYGQVLFEIISGRRNMDMPNDELSDYFPMLVLNALNNGVELMTLADPKLEGEVNKEELTRACKVACWCIQDHEQDRPTMAQVIQILEGVLQVDVPPIPQFFRSLAKGSAKTSRVETSEAYSTSNSSPYSFSFQPPVNPIHSVIP 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4047g00021 794 Pfam D-mannose binding lectin 78 167 IPR001480 -
Pral4047g00021 794 ProSiteProfiles Protein kinase domain profile. 467 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4047g00021 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 263 IPR036426 -
Pral4047g00021 794 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Pral4047g00021 794 FunFam Putative receptor-like protein kinase 542 744 - -
Pral4047g00021 794 CDD B_lectin 36 159 IPR001480 -
Pral4047g00021 794 PIRSF SRK 4 783 IPR024171 GO:0004674
Pral4047g00021 794 Gene3D Transferase(Phosphotransferase) domain 1 542 744 - -
Pral4047g00021 794 CDD STKc_IRAK 473 738 - -
Pral4047g00021 794 FunFam S-receptor-like serine/threonine-protein kinase 443 541 - -
Pral4047g00021 794 SMART serkin_6 467 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4047g00021 794 Pfam Protein kinase domain 470 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4047g00021 794 SMART ntp_6 325 400 IPR003609 -
Pral4047g00021 794 SMART blect_4 28 159 IPR001480 -
Pral4047g00021 794 ProSitePatterns Protein kinases ATP-binding region signature. 473 495 IPR017441 GO:0005524
Pral4047g00021 794 Pfam PAN-like domain 322 378 IPR003609 -
Pral4047g00021 794 ProSiteProfiles PAN/Apple domain profile. 322 401 IPR003609 -
Pral4047g00021 794 Gene3D - 23 156 IPR036426 -
Pral4047g00021 794 PANTHER OS07G0415500 PROTEIN 15 748 - -
Pral4047g00021 794 Pfam S-locus glycoprotein domain 221 301 IPR000858 GO:0048544
Pral4047g00021 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Pral4047g00021 794 CDD PAN_AP_plant 324 401 - -
Pral4047g00021 794 SUPERFAMILY Protein kinase-like (PK-like) 453 777 IPR011009 -
Pral4047g00021 794 ProSiteProfiles Bulb-type lectin domain profile. 28 155 IPR001480 -
Pral4047g00021 794 Gene3D Phosphorylase Kinase; domain 1 442 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4047g00021 Pral-Chr4047 180576 183146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4047g00021 452 741 Receptor kinase-like Gene Family AT5G45780 43.390 3.15e-71 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4047g00021 Pkinase 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4047g00021 - - aew:130751396 690.649