Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4047g00018 ATGCTCGCGGTGTCACCATTGAGGGGAACCAAAGATGAAATTAAAAGCCAAGGAGAGATGGGTGTTTTCTCATCAATCGTCGGTGAAGATGACGGGTTTGGAGAATTTTGTGATGGGAATCTATTGGAAAACATCAATTTTGACGATCTTTTTGTCGGCATCAACGTCGCCGGAGATGTGTTGCCGGATTTGGAGATGGGCCCGGAAATCCTCTCCGAGTTTTCCATGGAGTCGTCGGAGAACATGAACTCATCCTCGCTTTCTATGGAAAATAATGATAATAGAGGTGATCAACACCAGAACAGTATTATAACTGGGGAGGAGGAGGATTGTGATAAAAGCTCTTCAGCTTCGGCCTCAAATTCTGGGTCAAGCCGAGCAGCAGAAGAGATAGTGAACAAAAGAGACGATGAATGTACGGCGGCGGCGACGCTGAAGCCATCGACGAAGAACAGTGAGCAAAAGGGAAGAAAATCATCAGCCCAATCCAAAAATTCACAAGGGAAGAGAAAGGTGAAGGTGGACTGGACCCCAGAATTACACAGGCGATTCGTGCAAGCAGTGGAGCAGCTTGGAGTGGACAAGGCAGTTCCTTCCAAAATCTTAGAGATTATGGGAATTGCTTGTTTAACTCGCCACAACATCGCCAGCCACCTCCAAAAATATCGATCGCATAGGAAGCATTTGCTGGCGCGTGAAGCAGAAGCAGCGAGGTGGAATAAGAGGAGAGAGGTAAGGCCATGGGCAGCGCCACCCACCATGGGATTCCCTCAGATGGCTCCTCCGTCAACATGGACGATGCCCCAATATTTTAGGCCCTTACACGTATGGGGCCATCCCACGATGGACCCCTACTCCTTCATGCCCCACTGGCCTAAACAACATCATCATCTTCCACATTCAATGTCGCAGCCGCCGCCGCCGCCGCCCCCAGCCTGGCTATACCCAGTCGCTCCGCCACCTTCAGACCCTTCATTATGGCAGCCTCACCACCAGCAGGCTGATTCAAAAGCACTAACCCCAGGAACAGGAACATACTGCTTTCCACCTCCAACACCTCTGACTGCGACGGGATTTGGATCTCCTCCTGTCCCTGGCATTCCACCCCACGGCATGTTCACGGCAGATCCCGACATCGGATCTCCCGCCGGCGGGCAACCCCCCGGCCCATGGTCCGTCTGTGACTTCCACCCGTCCGAGGAAAGCGTAGATGCAGCTCTTGGAGATGTTTTATCAAAACCATCGCTGCCACTTCCCCTGGGCCTGAAGGCCCCGGCGCTTGATAGTGTGTTGAGTGAATTAAAGAGACAAGGAATTCCCAAGATTCCTCCCTCTCCTGCTTGA 1344 0.5201 MLAVSPLRGTKDEIKSQGEMGVFSSIVGEDDGFGEFCDGNLLENINFDDLFVGINVAGDVLPDLEMGPEILSEFSMESSENMNSSSLSMENNDNRGDQHQNSIITGEEEDCDNXSSSASASNSGSSRAAEEIVNKRDDECTAAATLKPSTKNSEQKGRKSSAQSKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSKILEIMGIACLTRHNIASHLQKYRSHRKHLLAREAEAARWNKRREVRPWAAPPTMGFPQMAPPSTWTMPQYFRPLHVWGHPTMDPYSFMPHWPKQHHHLPHSMSQPPPPPPPAWLYPVAPPPSDPSLWQPHHQQADSKALTPGTGTYCFPPPTPLTATGFGSPPVPGIPPHGMFTADPDIGSPAGGQPPGPWSVCDFHPSEESVDAALGDVLSKPSLPLPLGLKAPALDSVLSELKRQGIPKIPPSPA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4047g00018 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 169 228 IPR017930 -
Pral4047g00018 448 MobiDBLite consensus disorder prediction 145 168 - -
Pral4047g00018 448 SUPERFAMILY Homeodomain-like 170 229 IPR009057 -
Pral4047g00018 448 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 446 IPR044825 GO:0003700|GO:0045893
Pral4047g00018 448 MobiDBLite consensus disorder prediction 302 327 - -
Pral4047g00018 448 MobiDBLite consensus disorder prediction 294 392 - -
Pral4047g00018 448 MobiDBLite consensus disorder prediction 74 174 - -
Pral4047g00018 448 MobiDBLite consensus disorder prediction 74 129 - -
Pral4047g00018 448 Gene3D - 169 230 - -
Pral4047g00018 448 MobiDBLite consensus disorder prediction 356 371 - -
Pral4047g00018 448 FunFam Two-component response regulator 168 231 - -
Pral4047g00018 448 Pfam Myb-like DNA-binding domain 175 224 IPR001005 -
Pral4047g00018 448 NCBIfam myb-like DNA-binding domain, SHAQKYF class 172 226 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4047g00018 Pral-Chr4047 151057 154692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4047g00018 1 295 G2-like Transcription Factor Family AT5G44190 40.635 4.02e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4047g00018 Myb_DNA-binding 3.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4047g00018 - - pcin:129314514 606.675