Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4047g00015 ATGACTCAGCAAAGCAATATCAGTATTGTTGACAGAACCTGTCCTTCGTGTGGCCATCATATCAAAGACCAACAGGGAGGAATACATGAGTTACCAGGATTACCAGCAGGAGTGAAGTTTGATCCGAGTGACCAGGAGCTCTTACAACACTTGGAAGCGAAGGTGAGGTCTGATATTCACAAGCTTCATCCTTTAATCGATGACTTCATTCCTACTCTTGAAGCCCAAAATGGAATCTGCTCCACTCATCCCCAGAAACTCCCAGGAGTTAGAAAAGATGGCCTGATCCGCCATTTCTTTCACAGGCCATCAAAAGCATACACAACGGGAACAAGAAAAAGGAGAAAGGTGAACTCAGAAGAAGCAGAAGGGAGTGAGACAAGGTGGCACAAAACAGGCAAGACAAGGCCAGTGTACATTAATGGAAAGTTGAAAGGCTACAAGAAAATCCTCGTACTTTACGCCAACTATGGCAAACAAAGGAAGCCTGAGAAGACAAACTGGGTGATGCACCAGTACCACCTCGGATCCAACGAAGAGGAGAAAGAAGGAGAGCTGGTCGTGTCCAAGGTTTTCTACCAGACACAGCCTCGACAGTGTGGTTCTCTTCTGAAAACTCAACCTCTGCATCATCATCATCATCTTCATGGAGTCACCAGTCATAATCACAAGAACAATAATAATGGGTTCGTTGAGTTCTATAACTCTGGATTCATATCATTTGATCAAGCTGGCCAACAAAGATCTTCTCATTTTCCAGTTCATGATGATGAATCTCCTTTCATTGCTTGA 792 0.4407 MTQQSNISIVDRTCPSCGHHIKDQQGGIHELPGLPAGVKFDPSDQELLQHLEAKVRSDIHKLHPLIDDFIPTLEAQNGICSTHPQKLPGVRKDGLIRHFFHRPSKAYTTGTRKRRKVNSEEAEGSETRWHKTGKTRPVYINGKLKGYKKILVLYANYGKQRKPEKTNWVMHQYHLGSNEEEKEGELVVSKVFYQTQPRQCGSLLKTQPLHHHHHLHGVTSHNHKNNNNGFVEFYNSGFISFDQAGQQRSSHFPVHDDESPFIA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4047g00015 263 ProSiteProfiles NAC domain profile. 34 194 IPR003441 GO:0003677|GO:0006355
Pral4047g00015 263 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 10 207 IPR044799 GO:0003700
Pral4047g00015 263 SUPERFAMILY NAC domain 29 194 IPR036093 GO:0003677|GO:0006355
Pral4047g00015 263 MobiDBLite consensus disorder prediction 108 129 - -
Pral4047g00015 263 Pfam No apical meristem (NAM) protein 35 175 IPR003441 GO:0003677|GO:0006355
Pral4047g00015 263 FunFam NAC domain-containing protein 73 43 198 - -
Pral4047g00015 263 Gene3D NAC domain 43 198 IPR036093 GO:0003677|GO:0006355
Pral4047g00015 263 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4047g00015 Pral-Chr4047 110197 112669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4047g00015 12 201 NAC Transcription Factor Family AT4G28500 77.487 2.24e-111 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4047g00015 NAM 2.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4047g00015 - - gmx:100797459 410.223