Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4047g00006 ATGGAATCCCAAAACCAAGACCAATATTCAGCATCAAAGCTCCTTCATGCTCAAACCCACATATGGAACCACATCTTCAGCTTCATAAACTCAATGTCCCTCAAATCTGCAATAGATTTGAATATTCCAGATACCATTCACAAGCATGGCAGACCCATGCCTCTTTCTCTTCTCATCTCTTCCCTTCAAATCCATCCTTCCAAAACTCGCAATATCTATCGCTTAATGCGAATCCTCACCCATTCTGGCTTCTTCTGTCTCCAGAAACTTCCTGATGAAGCAGAAGAAGGCTATGTCCTTACGGATGCATCGATCCTTCTTTTGAAGGACAATCCCTTAAGCGTCACCCCTTTCTTGCTTGCCATGTTGGATCCCATCCTAACCAAGCCCTGGTATGAGGTGGCCAATTGGTTCCAGAACGACGATCCGACACCGTTTAATACGGCACATGGAAAGACGCTTTGGGAGTATGCCGGGGTTGAACCAAAGCTTAATCATTTTTTCAATGAGGCTATGGCTAGTGATGCCAGATTGGTGACCAGTGTGGTCATCGAGAAGTGTAAGGGTGTGTTTAAGGGATTAGAGTCATTAGTTGATGTCGGGGGTGGTACTGGGACAGTGGCTAAGGCCATTGCTAAAGCATTTCCGGAAATACAATGTACTGTGTTCGATCTCCCACACGTTGTCGATGGCCTCCAAGATAGTGGGAACCTCAAGTTTGTGGGAGGAGACATGTTCGAGGCCATTCCTCCTTCTGATGGCATACTATTCAAGTCGATTCTACATGATTGGAACGATGAGGAATGTGTGAAGATACTAACGAAGAGCAAGGAGGCAATTAGAAGCAAAGGGAAAGGAGGGAAGGTGATTATAATAGACATGATCATGGAGAATTCTAAGGGAGATATTGGTGATGAATGGGTTGAAACACAACTGTTCTCTGATATGTTGATGATGGTTTTGGTGACTGGAAAAGAGAGGAATGAGAAAGAGTGGGCCAAGTTGATCTTCTCTGCTGGTTTTAGTGACTATAAGATTACTCCAGTTTTAGGACTAAGATCTCTCATTCAGGCTTTTCCCTGA 1083 0.4432 MESQNQDQYSASKLLHAQTHIWNHIFSFINSMSLKSAIDLNIPDTIHKHGRPMPLSLLISSLQIHPSKTRNIYRLMRILTHSGFFCLQKLPDEAEEGYVLTDASILLLKDNPLSVTPFLLAMLDPILTKPWYEVANWFQNDDPTPFNTAHGKTLWEYAGVEPKLNHFFNEAMASDARLVTSVVIEKCKGVFKGLESLVDVGGGTGTVAKAIAKAFPEIQCTVFDLPHVVDGLQDSGNLKFVGGDMFEAIPPSDGILFKSILHDWNDEECVKILTKSKEAIRSKGKGGKVIIIDMIMENSKGDIGDEWVETQLFSDMLMMVLVTGKERNEKEWAKLIFSAGFSDYKITPVLGLRSLIQAFP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4047g00006 360 Pfam O-methyltransferase domain 131 342 IPR001077 GO:0008171
Pral4047g00006 360 CDD AdoMet_MTases 197 296 - -
Pral4047g00006 360 PANTHER O-METHYLTRANSFERASE 15 345 IPR016461 GO:0008168
Pral4047g00006 360 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Pral4047g00006 360 FunFam O-methyltransferase ZRP4 109 360 - -
Pral4047g00006 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 360 IPR016461 GO:0008168
Pral4047g00006 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Pral4047g00006 360 Gene3D - 3 107 IPR036388 -
Pral4047g00006 360 FunFam Coniferyl alcohol 9-O-methyltransferase 4 107 - -
Pral4047g00006 360 Gene3D Vaccinia Virus protein VP39 108 360 IPR029063 -
Pral4047g00006 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 356 IPR029063 -
Pral4047g00006 360 SUPERFAMILY "Winged helix" DNA-binding domain 12 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4047g00006 Pral-Chr4047 63441 64618 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4047g00006 32 346 Monolignol Biosynthesis Gene Families AT5G54160 34.365 1.17e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4047g00006 - K16040 qsa:O6P43_000776 552.747