Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4047g00001 ATGGAACCCCAAAACCAAGAGCATTATTCAGCAACAAGACTGCTTAATGCTCAAACCCATATATGGAACCACACTTTCAGCTTCATAAACTCAATGTCTCTCAAGTCTGCCATAGACTTAAACATCCCTGACATCATTCACAAGCATGGCAAGCCCATGCCCCTTCCTCTTCTCATCTCTTCCCTACAAATCCACCCTTCCAGGTCCCAAAACATTTATCGCTTAATGAAACTCCTCACCTATTCGGGCTTCTTCTCTCTTCAAAAAGTTTCAGAGACTGAACCTTCAGAAGAAGGTTATGTCCTAACTGATGCATCCACCCTTCTTCTCAAGGACCACCCCTTAAGCGCCACACCTTTCTTCCTCGCTATGATCGATCCCGTCATAACAAAGCCTTGGTGCCAATTGACCAATTGGCTCCAAAATGATGCTCCGTCACCGTTTCACATGGCGTATGGGAACAAGATTTGGGATTACGCTAAGGTCGACCCTGATTTTAATCACTCTTTCAATGAAGCTATGGCTAGCGATGCCAGCTTGGTCATAAATGTGGCGATTGAAAGTTGTAAAGAGGTGTTCAATGGAATAAAGTCGTTGGTTGATGTTGGGGGTGGCACTGGGACCACAGCTAAGGTCGTTGCTAAAGCCTTTCCAGAAATACAATGTACTGTGTTTGATCTCCCACAAGTTGTTAATGGCTTACAAGGTAATGCTGCGAATCTCATGTTTGTGGGAGGAAACATGTTCGAGGCCATCCCTCCTTCCGACGCCATACTGATGAAGTGGATACTGCATGATTGGACTGACGAGGAGTGTTTGAAAATTCTGAAGAACTGCAAGGAGGCAATCGCAAGCAAAGGCAAAGGTGGGAAGTTGATTATAATTGACATGGTTTTGGAAGAGGACTTGAGAGACAACCATAATAAATCAGTTGAGAATCAACTGTTGATTGATGTGCTGTTGATGGTTTTGTATCCTGGAAAAGAGCGAACTGAGATGGAATTGGCCCAGTTATTTCGTTCTGCTGGTTTTAGTGATTACAAGATTTATCCTGTTCTGGGTTCGCGATCTCTCATCGAAGTTTATCCATGA 1092 0.4396 MEPQNQEHYSATRLLNAQTHIWNHTFSFINSMSLKSAIDLNIPDIIHKHGKPMPLPLLISSLQIHPSRSQNIYRLMKLLTYSGFFSLQKVSETEPSEEGYVLTDASTLLLKDHPLSATPFFLAMIDPVITKPWCQLTNWLQNDAPSPFHMAYGNKIWDYAKVDPDFNHSFNEAMASDASLVINVAIESCKEVFNGIKSLVDVGGGTGTTAKVVAKAFPEIQCTVFDLPQVVNGLQGNAANLMFVGGNMFEAIPPSDAILMKWILHDWTDEECLKILKNCKEAIASKGKGGKLIIIDMVLEEDLRDNHNKSVENQLLIDVLLMVLYPGKERTEMELAQLFRSAGFSDYKIYPVLGSRSLIEVYP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4047g00001 363 FunFam O-methyltransferase ZRP4 111 363 - -
Pral4047g00001 363 CDD AdoMet_MTases 199 299 - -
Pral4047g00001 363 Pfam O-methyltransferase domain 133 345 IPR001077 GO:0008171
Pral4047g00001 363 Gene3D Vaccinia Virus protein VP39 110 363 IPR029063 -
Pral4047g00001 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 362 IPR029063 -
Pral4047g00001 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Pral4047g00001 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 363 IPR016461 GO:0008168
Pral4047g00001 363 SUPERFAMILY "Winged helix" DNA-binding domain 13 114 IPR036390 -
Pral4047g00001 363 FunFam Coniferyl alcohol 9-O-methyltransferase 4 109 - -
Pral4047g00001 363 Gene3D - 3 109 IPR036388 -
Pral4047g00001 363 PANTHER O-METHYLTRANSFERASE 15 348 IPR016461 GO:0008168
Pral4047g00001 363 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4047g00001 Pral-Chr4047 5130 6429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4047g00001 32 361 Monolignol Biosynthesis Gene Families AT5G54160 33.832 8.09e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4047g00001 - K16040 gmx:100794122 459.144