Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4046g00018 ATGGGAACTCAAAACGAAGGGCACGAAGCCACGACAAGAGTACTTGAAGCTCAAACCCATGGATGGAACCATGTCTTAAGTCTCATAAACTCATTGTCCCTCAAATCTGCAATAGAGTTAAACATCCCAGACATCATTCACAAGCATGGCAAGCCCATGCCTCTTTCTCTTCTCGCCTCTTCCCTTCAAATCCACCCTTCCAAGGCCCCTAACCTCCGTCGCTTGATGCGCTTCCTCACTCATACTGGCTTCTTCTCTCTCCAGAAACTCCCAGAAACTTCTGGCCCTTTAGAAGAAGATGGCTACGTCTTAACTGATACATCAACCCTTTTTCTCAAGGATCATCCCTTCACTCTCACCCCTTTCTTGCTTTCCATGCTTGATCCACTCATGATGAAACCATGGGACCATTTTCCCACTTGGTTACAGAATGACGATCCGACGCCGTTTGAAACGGCAAATGGAAAGGCGTTCTATGACTATGCTTGGCATGTGCCTAAGCTTTTCAATTACTTCAGAGATTACATGGCTGGTGATTCACAACTGGTGTCGAAAGTGTTGGTTGAACAGTGTAGGGATGTGTTTAAGGGATGTGGCTCGCTGGTTGATGTGGGGGGTAACACCGGGACCATGACCAAAGCCTTGGCTGAAGCTTTTCCAGAAATGGAGTGTACTGTGTTCGATTCGCCTTACGTTATTGGCGACATGAAGGGCTGTGGGAATCTCAGGTTCGTCAAAGGAGACATGTTTCAAGCTATTCCTCCTGCTGATGTTATATTAATGAAGTGGATTCTTTGTGACTGGGACGACGAGAGATGTCTGAAAATACTGAAGAACTGCAAGGAGGCAGTAACAAGCAAAGGCAAACGAGGAAAACTGGTTATAATAAACGAGGTGGTTGAGGATGAGAAGGGAGATTATGAATCGGTTGAAACACAGTTGCAATTTGATCTTCTGTTGATGGCAGTGCTCCCAGGAAAAGAGAGGAATGAGAAAGAGTGGGCCCAGTTGATTTCCTCTGCAGGTTTCAGCACCTATAAGATAATTCCAGTTCTAGGTTTAAGGTCCCTCGTTGAGGTTTATCCATAA 1089 0.4573 MGTQNEGHEATTRVLEAQTHGWNHVLSLINSLSLKSAIELNIPDIIHKHGKPMPLSLLASSLQIHPSKAPNLRRLMRFLTHTGFFSLQKLPETSGPLEEDGYVLTDTSTLFLKDHPFTLTPFLLSMLDPLMMKPWDHFPTWLQNDDPTPFETANGKAFYDYAWHVPKLFNYFRDYMAGDSQLVSKVLVEQCRDVFKGCGSLVDVGGNTGTMTKALAEAFPEMECTVFDSPYVIGDMKGCGNLRFVKGDMFQAIPPADVILMKWILCDWDDERCLKILKNCKEAVTSKGKRGKLVIINEVVEDEKGDYESVETQLQFDLLLMAVLPGKERNEKEWAQLISSAGFSTYKIIPVLGLRSLVEVYP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4046g00018 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 362 IPR016461 GO:0008168
Pral4046g00018 362 Pfam O-methyltransferase domain 135 344 IPR001077 GO:0008171
Pral4046g00018 362 SUPERFAMILY "Winged helix" DNA-binding domain 12 116 IPR036390 -
Pral4046g00018 362 FunFam O-methyltransferase ZRP4 113 362 - -
Pral4046g00018 362 FunFam Coniferyl alcohol 9-O-methyltransferase 4 111 - -
Pral4046g00018 362 Gene3D - 3 111 IPR036388 -
Pral4046g00018 362 PANTHER O-METHYLTRANSFERASE 31 346 IPR016461 GO:0008168
Pral4046g00018 362 CDD AdoMet_MTases 201 296 - -
Pral4046g00018 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Pral4046g00018 362 Gene3D Vaccinia Virus protein VP39 112 362 IPR029063 -
Pral4046g00018 362 Pfam Dimerisation domain 33 80 IPR012967 GO:0046983
Pral4046g00018 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 361 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4046g00018 Pral-Chr4046 84717 86226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4046g00018 32 349 Monolignol Biosynthesis Gene Families AT5G54160 33.230 1.70e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4046g00018 - K16040 qsa:O6P43_028865 459.144