Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4046g00015 ATGAGCAGATCAGATATATCAATTGCAATGCAAGGGAATAAGAATGAGACACATGCAGCATGTGCAGCATGCAAGCACCAGAGAAAGAAGTGCAGTATGCACTGCGCGTTGGCACCTTATTTTCCAGCAAACAGAAACAGAGAATTCCAAGCAGTCCACAAAGTGTTCGGAGTGAGCAACATCACCAAGTTAGTGAAATACGTGAAAGAAGAGCATCGAAGAAAGGTGGTGGAGTCACTGATATGGGAAGCTTTCTGCAGACAACAAGATCCAATTCTGGGTTCTTACGGACAGTACAAGAAGGTTTATGATCAGTACACCAAACTGCTGCAACAGTTCCATCATCATCATCACAATAATATTACTAATGTGCCAAAAGATCACCTTCATCATCAGTTACCATCTTCTCATAATCATCAGAGTCAGAATCATCAGGTGATGATTAATAATAATGGAGAGAGATCATCGGTGGAGGATGGGTTAGAGTTCATTCATCATCAGGATTATTCTCATAAGAACAACATGATTCTGGATTCTGCTTTGTATGGATTAGACTTTTCACAGTTCGATGGTTTCAAGTCTGAAGTTGTCCTCAATCAGTTCCAACAACACCATCCGCCTTACTATTGTTCGTCAGGTCAGCAGTTCAAATAA 654 0.4083 MSRSDISIAMQGNKNETHAACAACKHQRKKCSMHCALAPYFPANRNREFQAVHKVFGVSNITKLVKYVKEEHRRKVVESLIWEAFCRQQDPILGSYGQYKKVYDQYTKLLQQFHHHHHNNITNVPKDHLHHQLPSSHNHQSQNHQVMINNNGERSSVEDGLEFIHHQDYSHKNNMILDSALYGLDFSQFDGFKSEVVLNQFQQHHPPYYCSSGQQFK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4046g00015 217 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Pral4046g00015 217 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 18 149 - -
Pral4046g00015 217 Pfam Lateral organ boundaries (LOB) domain 20 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4046g00015 Pral-Chr4046 60396 62422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4046g00015 18 117 AS2 family AT1G06280 57.000 6.01e-39 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4046g00015 LOB 2.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4046g00015 - - ahf:112769909 183.341