Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4046g00010 ATGGCACAATTACCTCCCAAGATCCCAAACACGACGCTATGTTGGTCTGACCTCTCTGATTCTTCCCCACCGAACATGCCTTACGTGGCAAGTTTCTCACCCGATGTTGCCGCCGCCGCAACTCGGGACCCACTTTGGGCGGATGAATTCCACGACTTCTCGTCGGAGAGACGCCAGGCCCATCGCCGGTCGGTGAGCGATTCCATTGGCTTCTTCGAGGCTCCCATGTTGCTGGAGGATTGTCATGTTAATTCTAGGAATGCCCGGCCCAGGCTTGAGGCTGAGCACGAGTTTGACAGGTTTGGTGATGAGAAATTCATGTCCCCGTTCAATGATGACTTATCTGGGGCTGCCATGCCTCTAACCTTTTCCTCTTCAAAATCTTCAAGCCCATCTGATCACAACAGCATTAATGATGAGAAAGAAATCACGAACCAAGTCCAACAACAACAAAACCTGCACAAGCAGAACGAAGAAGATCAGCCGAAGCAATTGAAAAGTGAATCCCATGAGGTTCAAAACCATATAAGCAAACAGCAGGAAACACAACCTTCAAATAATAAATTAGCAACTCCTTCCTCTGACAAGATCACTGATCCTAAGAGGGTCAAAAGAATCTTGGCAAATAGGCAATCTGCACAAAGATCACGAGTGAGAAAGCTGCAATATATAATCGAGCTAGAGCGTAGTGTAACTTCATTACAGGCCGAAGTATCAGTGCTGTCTCCAAGGGTTGCATTTTTAGATCAGCAACGCTTGCTTCTAAATGTTGACAATGGTGCTCTTAAGCAACGATTAGCTGCCCTCGCTCAGGACAAGATCTTTAAAGATGCTCTTCAAGATGCACTTAAGAGGGAGATAGAGAGGCTTAGGCAAGTGTATCACCAACAAAACCACAAGAAATTGGAATATGTTGCAGGTTCAGTATCCCCCTCACCAAATCCACAATGTCATGGTCTGGCTGAAAAGGAACAGCTTCTCAACGAGCTTCTCAACGTTTAA 1002 0.4631 MAQLPPKIPNTTLCWSDLSDSSPPNMPYVASFSPDVAAAATRDPLWADEFHDFSSERRQAHRRSVSDSIGFFEAPMLLEDCHVNSRNARPRLEAEHEFDRFGDEKFMSPFNDDLSGAAMPLTFSSSKSSSPSDHNSINDEKEITNQVQQQQNLHKQNEEDQPKQLKSESHEVQNHISKQQETQPSNNKLATPSSDKITDPKRVKRILANRQSAQRSRVRKLQYIIELERSVTSLQAEVSVLSPRVAFLDQQRLLLNVDNGALKQRLAALAQDKIFKDALQDALKREIERLRQVYHQQNHKKLEYVAGSVSPSPNPQCHGLAEKEQLLNELLNV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4046g00010 333 SUPERFAMILY Leucine zipper domain 201 255 IPR046347 GO:0003700|GO:0006355
Pral4046g00010 333 MobiDBLite consensus disorder prediction 145 200 - -
Pral4046g00010 333 Gene3D - 200 273 - -
Pral4046g00010 333 PANTHER BASIC LEUCINE ZIPPER 34 1 307 - -
Pral4046g00010 333 FunFam Transcription factor VIP1 200 271 - -
Pral4046g00010 333 CDD bZIP_plant_RF2 202 252 IPR044759 GO:0003700|GO:0006355
Pral4046g00010 333 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Pral4046g00010 333 MobiDBLite consensus disorder prediction 176 194 - -
Pral4046g00010 333 Coils Coil 280 300 - -
Pral4046g00010 333 MobiDBLite consensus disorder prediction 156 175 - -
Pral4046g00010 333 MobiDBLite consensus disorder prediction 119 138 - -
Pral4046g00010 333 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 251 IPR004827 GO:0003700|GO:0006355
Pral4046g00010 333 MobiDBLite consensus disorder prediction 119 133 - -
Pral4046g00010 333 SMART brlzneu 197 261 IPR004827 GO:0003700|GO:0006355
Pral4046g00010 333 Pfam Basic region leucine zipper 198 248 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4046g00010 Pral-Chr4046 53190 55641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4046g00010 1 278 bZIP Transcription Factor Family AT3G58120 51.178 3.19e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4046g00010 bZIP_2 7.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4046g00010 - - pcin:129313713 495.738