Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4046g00004 ATGACAAGGCATAAAGGTACGGGAATGAAGAGCGCTGGAGGAGGAGAGATTATCCAAGTTCAAGGAGGTCACATTGTTCGATCCACCGGTCGGAAAGATCGTCACAGTAAGGTTTATACTTCGAAAGGGCCTCGAGATCGAAGGGTTCGTTTATCGGCTCACACCGCGATTCAATTCTACGATGTTCAAGACCGGCTCGGCTACGACCGGCCTAGCAAAGCCGTAGATTGGCTTATCAAGAATGCCAAATCCGCCATTGATAAGCTTGCCGAGCTTCCTCCATGGCAGCCTATAGCCGCTAACACCGAGGAAGAAACTCACAACGCGGAAAACCCTGAGAATTCTGAAGCTCCTTCGGGATTTCTCCCGCCTGCGATTGATTCCGACGCCATAGCCTTCTTCCCTACGAGTTCTGCAACTTCCTCCATCAATTTTCAGAGCTATCCATCGGAGATAATATCCAGAACAACGAATTCCGGGCAAGATCTTGGCCTGTCTCTTCATTCGCTCAATCAAACGGCGTCGAACGACGAAAACATGTTCGGTAGTTCGAATCCAGTCGAATTCGAGTCGAATTTCCAGAGGATGTTCGAGTCCAATTCGTTGATAGGGCAAGGCTCGATGTTTCCTCAAAGGGGGACCCTTCAGTCCAGTTTTTCGCCACTTGTTCGCGCGTGGAGCGACGTGCCCGTGGCATCTTCGGAGCATCACCACCATCAGAATCACAAGTCGCAACCTTCCATTTTCGGCGGCCGCTTTCACTCCGACGGGTTGCCGGAATTCTGCATTCCGACGAGAATTCAAGGCCAGCAACAAGAACGGTCCTCTGCTTCTCCTAATTCTCACCACCACTGA 855 0.5099 MTRHKGTGMKSAGGGEIIQVQGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKSAIDKLAELPPWQPIAANTEEETHNAENPENSEAPSGFLPPAIDSDAIAFFPTSSATSSINFQSYPSEIISRTTNSGQDLGLSLHSLNQTASNDENMFGSSNPVEFESNFQRMFESNSLIGQGSMFPQRGTLQSSFSPLVRAWSDVPVASSEHHHHQNHKSQPSIFGGRFHSDGLPEFCIPTRIQGQQQERSSASPNSHHH 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4046g00004 284 MobiDBLite consensus disorder prediction 1 47 - -
Pral4046g00004 284 ProSiteProfiles TCP domain profile. 31 89 IPR017887 -
Pral4046g00004 284 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 250 IPR005333 GO:0003700
Pral4046g00004 284 Pfam TCP family transcription factor 30 141 IPR017887 -
Pral4046g00004 284 MobiDBLite consensus disorder prediction 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4046g00004 Pral-Chr4046 29981 32007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4046g00004 3 274 TCP Transcription Factor Family AT3G15030 39.646 3.09e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral4046g00004 TCP 8.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4046g00004 - - pcin:129295286 520.776