Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4045g00005 ATGGAAGCAATTTGTTGGAGTTCTGGTGTTCGGGGAAATGCCTCAGAGGCAAGTCCTGATGGTTTTCTGGATAACTATGCGGAAATAGGTGGAGGGTTTGTTTCATCTTCATCTCTGGTGTTGGACAGGGACAAGGGAGAGCTTGTGGCTGCTCCAGCCAAACTGGAGCGCAAGAGTGGGTCCAATGAGAGAAGTGTTGAAAGTTTGAAGAACCATAGCGAAGCAGAGAGGAGGAGGAGGGCAAGGATTAATGCACATCTTGACACGCTTAGGAGTGTAGTTCCGGGTGCTAAGAAGATGGACAAAGCGTCATTACTTGGCGAGGTTATCAGACATTTGAAAGAGCTGAAAAGGAATGCAGCACAAGCATGTGAGGGTTTGATGATACCAAAGGACAGCGATGAAATAAGAGTTGAAGAACAGGAGGATGGTTCAAATGGCCTCCCTTATTCAATCAAAGTATCGCTATGTTGTGAATATAAACCAGGGTTGTTGCCTGAACTAAGACAAGCACTTGATGCCCTTCATCTTAAGATAATGATGGCAGAAATTGCAACCTTGGGAGGGAGGATGAAGAATGTGTTTGTTATAATTAGCTGTAGAGAGCACAACATTGAAGATACTGCATATCGTCAGCTTCTTGCCGTCTCTGTTCATCAAGCTATTAGGTCTGTACTTGATAGATTCTCTTCTTCAGAAGATCTCTTTAGAACCAGAAAGAGAAGGAGACTTTCTATATTCAGTTCATCACCTTTGGGAGATTTCTTGTGA 771 0.4371 MEAICWSSGVRGNASEASPDGFLDNYAEIGGGFVSSSSLVLDRDKGELVAAPAKLERKSGSNERSVESLKNHSEAERRRRARINAHLDTLRSVVPGAKKMDKASLLGEVIRHLKELKRNAAQACEGLMIPKDSDEIRVEEQEDGSNGLPYSIKVSLCCEYKPGLLPELRQALDALHLKIMMAEIATLGGRMKNVFVIISCREHNIEDTAYRQLLAVSVHQAIRSVLDRFSSSEDLFRTRKRRRLSIFSSSPLGDFL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4045g00005 256 Gene3D - 62 124 IPR036638 GO:0046983
Pral4045g00005 256 PANTHER TRANSCRIPTION FACTOR BHLH30 35 246 IPR045847 GO:0003700|GO:0006355
Pral4045g00005 256 SMART finulus 73 122 IPR011598 GO:0046983
Pral4045g00005 256 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
Pral4045g00005 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 120 IPR036638 GO:0046983
Pral4045g00005 256 CDD ACT_UUR-ACR-like 154 197 - -
Pral4045g00005 256 MobiDBLite consensus disorder prediction 55 78 - -
Pral4045g00005 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4045g00005 Pral-Chr4045 27526 30174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4045g00005 48 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 47.059 2.31e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral4045g00005 HLH 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4045g00005 - - gmx:100788819 354.369