LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4045g00003	ATGGCTTCCTCCAAAGAGCGCGAGAATTTCGTGTATGTCGCCAAGCTTGCTGAGCAGGCCGAGCGATACGATGAGATGGTGGATGCTATGAAGAAGGTTGCAAATCTAGATGTTGAGCTGACCGTTGAAGAGAGAAATTTACTTTCTGTTGGTTACAAGAATGTAATTGGTGCTCGCAGAGCATCATGGAGGATACTGTCCTCAATAGAGCAAAAAGAAGAAACAAAAGGGAATGAAGTAAATGCCAGACGGATTAAGGAATATAGGCACAAAGTTGAAGCAGAGCTTTCAAACATCTGTAATGATGTTATGACGGTGATTGATGAGCACCTCATACCTTCTGCTACTGTTGGTGAATCAACTGTGTTTTTCTATAAGATGAAAGGGGATTATTATCGTTATCTTGCAGAATTCAAATCAGGCAACGAAAAGAAAGAGGCTGCTGATCAGTCTATGAAAGCATATGAGGCTGCTACCGCAGCAGCAGAGGCTGAATTGCCCCCGACGCACCCCATCCGATTGGGGCTGGCTCTAAATTTCTCAGTTTTCTACTATGAGATCATGAATTCACCTGAAAGGGCCTGTCATCTTGCGAAGCAAGCTTTTGATGAAGCTATCTCTGAGCTTGACACCTTGAATGAGGAGTCATACAAAGATAGCACATTGATCATGCAGCTTCTCAGGGACAACCTTACCCTTTGGACTTCTGACATCCCAGAAGATGGAGATGCCCAGAAAGTGAATGGCACTGCCAAGGTTGGCGGAGGCGAGGATGCAGAGTGA	783	0.4496	MASSKERENFVYVAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNEVNARRIKEYRHKVEAELSNICNDVMTVIDEHLIPSATVGESTVFFYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYEAATAAAEAELPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDAQKVNGTAKVGGGEDAE	260

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4045g00003	260	PANTHER	14-3-3 PROTEIN	7	238	IPR000308	-
	Pral4045g00003	260	Coils	Coil	145	165	-	-
	Pral4045g00003	260	Coils	Coil	13	33	-	-
	Pral4045g00003	260	ProSitePatterns	14-3-3 proteins signature 2.	217	236	IPR023409	-
	Pral4045g00003	260	Coils	Coil	195	215	-	-
	Pral4045g00003	260	SMART	1433_4	7	248	IPR023410	-
	Pral4045g00003	260	FunFam	14-3-3 protein epsilon	2	248	-	-
	Pral4045g00003	260	Pfam	14-3-3 protein	14	235	IPR023410	-
	Pral4045g00003	260	SUPERFAMILY	14-3-3 protein	6	237	IPR036815	-
	Pral4045g00003	260	Gene3D	-	1	249	IPR036815	-
	Pral4045g00003	260	ProSitePatterns	14-3-3 proteins signature 1.	45	55	IPR023409	-
	Pral4045g00003	260	PIRSF	14-3-3	1	247	IPR000308	-
	Pral4045g00003	260	MobiDBLite	consensus disorder prediction	239	260	-	-
	Pral4045g00003	260	PRINTS	14-3-3 protein zeta signature	208	237	IPR000308	-
	Pral4045g00003	260	PRINTS	14-3-3 protein zeta signature	119	141	IPR000308	-
	Pral4045g00003	260	PRINTS	14-3-3 protein zeta signature	39	68	IPR000308	-
	Pral4045g00003	260	PRINTS	14-3-3 protein zeta signature	88	112	IPR000308	-
	Pral4045g00003	260	PRINTS	14-3-3 protein zeta signature	154	180	IPR000308	-
	Pral4045g00003	260	PRINTS	14-3-3 protein zeta signature	181	207	IPR000308	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4045g00003	Pral-Chr4045	5329	9631	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4045g00003	1	260	14-3-3 family	AT2G42590	82.510	7.88e-162	448

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4045g00003	K06630		-	gmx:100801348	468.003