Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4044g00102 ATGGGATTCACTCATCTTTCTCCTTCTTCTTCTCAATCCATGCCTCTCACCAGAACCGACAATTTCTCTGTTGGCCAAGCCGTCGAAGTCACCAACAACCCTCCAGGCTCTTACTTTGAAGCCACTGTAGTCTCGCGCCTCTCCAATGGTTCCTATGTCGTCGAGTACGACATACTGGTAAACGACGACAGCGACGACGTTCGTGATGACAGTTTCTTCACCGAGACGGTTTACCCTAACGACCTTCGTCCCCAGCCGCCACCCGTCGATGTTCCAGCCGCTGGGTTTTCTCTGAACCAAAAGGTGGATGCCTACGAAAACGAGGCCTGGTGGGCCACTACCGTCACCGGAAGAAGGGACTCAAATTATTATTTTGTTCGCTGTGTCGCCGGAGACAGTGACGTTATGGTTCATTCTTCTCAGCTTCGGGTTCATCAGGACTGGATCGGGGGACGATGGGTTTTGCCCTAG 471 0.5244 MGFTHLSPSSSQSMPLTRTDNFSVGQAVEVTNNPPGSYFEATVVSRLSNGSYVVEYDILVNDDSDDVRDDSFFTETVYPNDLRPQPPPVDVPAAGFSLNQKVDAYENEAWWATTVTGRRDSNYYFVRCVAGDSDVMVHSSQLRVHQDWIGGRWVLP 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4044g00102 156 CDD Tudor_SF 25 57 - -
Pral4044g00102 156 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 16 155 - -
Pral4044g00102 156 Pfam Agenet domain 25 87 IPR008395 -
Pral4044g00102 156 SMART agenet_At_2 94 150 IPR014002 -
Pral4044g00102 156 SMART agenet_At_2 20 90 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4044g00102 Pral-Chr4044 709738 710208 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4044g00102 36 148 PHD Transcription Factor Family AT5G58610 26.923 4.97e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4044g00102 - - pcin:129313269 167.933