LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4044g00093	ATGGATGAGAGACGAAATGATGCAGGGCCCGCAGAACAAGGGCCATCAAACTCTTCATGGTGGCCATCAGACTTTGTTGAAAAATTTGGATCCGTTTCCCTGGGTTCTCAAGAAGAGACCTTAAATCATAAAGAATCACCTAGACATTTTGACCAAGGTGTTTTGTCACCTCATAAGGCATCACAAATTCTCTGGCGCACTGGCATGCTTTTAGAACCAATACCAAATGGCTTTTATTCAGTCGTTCCTGATAAAAGGCTCAAGGAAATTTTTGATAATATTCCTACAATGGATGATATTCATGCTCTGGGCGGAGAGGGTCTAAAGGCTGATGTCATTTTGGTGGATGCGGAGAAAGATAAAAAATTATCCATGTTGAAGCAGTTGATCGTGGCCCTTGTGAAAGGATTGAGCTCAAATCCACCTGTGATGATAAAGAAGATAGCTGGACTAGTTTCTGATTTTTACAAGCGATCAAATGTGGAAAGTCCAGCAAAAGCTGCAGTAGAGGAAACCTCCCACATGTTTGAGAATCGAGGTGCCCAATTACTTGGACAAATAAAGAATGGTTCATGCCGTTCTCGAGCAATCTTATTTAAAGTGTTAGCAGATACTGTTGGTCTTGAAAGTAAGCTCAGGGTGGGTTTGCCGAATGATGGGGTTGTTGAATGTGTGGACTCGTACAAGCATATGTCAGTGACTGTTGTATTAAATTCTGTGGAACTGCTGGTTGATCTCATGCGATGCCCTGGTCAATTATTACCTCGGTCCAACAAGGCAATTTTCATGACACATATTTCTGCAGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCTCTAGAACCAAACAGTCCTTTATATGGGGTTTCAGAGAAAGTGGATCCTGACAGCGCTGAAAAGGAGGAGAACTTTCCATTCCAGAGGAGATTTGACACTCCTTCAAATGTATCTGGCCTTTCTTTGCGAAATTTGATGTTAAGGTCAAATACCAGTCTAGATAGGAAATTGAGTTTGTCTCATAGTGAACCCAATATTGCAATTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACAGCTAGTTCCAGTCCAGAGCATCCATCATTTAAGGCACGTGGTCGGTCCATGCTTAGTGGTGATAGGAAAGCATTCAGAGACTTTGCGGATGATGAGGCTGCATCAAGGTCAGATGGTGCATCTTCATCAGAAGCTCGAAGGATTAGAAGAAGAAGCATCAGCATTACACCTGAGATTGGTGATGATATCGTAAGGGCTGTTCGTGCGATGAATGAAACACTGAAGCAGAATCGTCTTTTGAGAGAGCGAGGGGATAATAGCTCATTCTCCCATTCTGCAAATGATACAAATAGCATTGAAGACCTTCAGAAAAATATGTCAAATTTCCATCGAGATGGTCGTGAGAGATCTACTTTGAATTCTCTTCCACCTGATCATGTAAATTCCCAGAAAGCAATGTCATTACCCTCTTCACCGCATGGCTACAGGGGCCAGACATCTGACAGAAGTGGGCTATCGAGATATGGAGTGAACGAATTGCAATCAACATGGAATAAAGTCCTTGAATCGTCAATGTTTAATAATAAACCCCTCTTGCCATATGAAGAATGGAATATTGACTTTTCAGAAATAACCGTTGGAACACGTGTCGGGATTGGGTTTTTTGGAGAAGTCTTCCGTGGGGTGTGGAATGGCACAGACGTTGCAATCAAGGTTTTTCTGGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGGCTCCGACATCCAAATGTAATTTTATTTCTTGGGGCGTGCACAAAGCCTCCACGCTTGTCAATGGTTACTGAGTACATGGAAATGGGATCACTGTATTACTTGATCCATTTGAGCGGCCAAAAGAAGAAACTTAGCTGGCGGAGAAGACTGAAGATGTTGCGAGATATATGCAGGGGGCTGATGTGCATACACCGAATGAAGATAGTTCACCGTGACCTGAAAAGTGCAAATTGTCTTGTGAATAAACACTGGACGGTGAAGATCTGTGATTTTGGGCTTTCAAGGATCATGACAGAGCCTAGTATCAAAGACGCTTCATCAGCCGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGGAATGAACCGTTCAATGAAAAATGTGACATATTTAGCCTGGGAGTGTTGATGTGGGAGCTCTGTACTTTGAGCAGGCCTTGGGAGGGTATACCACCAGAAAGGGTGGTTTATGCCGTTGCTAACGAGGGATCTAGGCTGGATATTCCTGAAGGCCCGTTAGCCAAGCTTATTGCAGATTGTTGGGCAGAATCAAATGAACGGCCAAGTTGTGAGGAGATCCTCTCTCGTTTGCATAATTGCGAGTACTCTATGCTGAGCGAAACATGA	2454	0.4336	MDERRNDAGPAEQGPSNSSWWPSDFVEKFGSVSLGSQEETLNHKESPRHFDQGVLSPHKASQILWRTGMLLEPIPNGFYSVVPDKRLKEIFDNIPTMDDIHALGGEGLKADVILVDAEKDKKLSMLKQLIVALVKGLSSNPPVMIKKIAGLVSDFYKRSNVESPAKAAVEETSHMFENRGAQLLGQIKNGSCRSRAILFKVLADTVGLESKLRVGLPNDGVVECVDSYKHMSVTVVLNSVELLVDLMRCPGQLLPRSNKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSEKVDPDSAEKEENFPFQRRFDTPSNVSGLSLRNLMLRSNTSLDRKLSLSHSEPNIAIAFGRRSRRKVIAEQRTASSSPEHPSFKARGRSMLSGDRKAFRDFADDEAASRSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLRERGDNSSFSHSANDTNSIEDLQKNMSNFHRDGRERSTLNSLPPDHVNSQKAMSLPSSPHGYRGQTSDRSGLSRYGVNELQSTWNKVLESSMFNNKPLLPYEEWNIDFSEITVGTRVGIGFFGEVFRGVWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTEPSIKDASSAGTPEWMAPELIRNEPFNEKCDIFSLGVLMWELCTLSRPWEGIPPERVVYAVANEGSRLDIPEGPLAKLIADCWAESNERPSCEEILSRLHNCEYSMLSET	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4044g00093	817	Gene3D	Transferase(Phosphotransferase) domain 1	637	817	-	-
	Pral4044g00093	817	MobiDBLite	consensus disorder prediction	488	517	-	-
	Pral4044g00093	817	MobiDBLite	consensus disorder prediction	1	23	-	-
	Pral4044g00093	817	ProSiteProfiles	Protein kinase domain profile.	558	814	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4044g00093	817	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	677	689	IPR008271	GO:0004672\|GO:0006468
	Pral4044g00093	817	MobiDBLite	consensus disorder prediction	272	298	-	-
	Pral4044g00093	817	MobiDBLite	consensus disorder prediction	453	467	-	-
	Pral4044g00093	817	Pfam	Protein tyrosine and serine/threonine kinase	559	806	IPR001245	GO:0004672\|GO:0006468
	Pral4044g00093	817	SMART	serkin_6	558	810	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4044g00093	817	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	360	810	-	-
	Pral4044g00093	817	Gene3D	Phosphorylase Kinase; domain 1	551	636	-	-
	Pral4044g00093	817	SUPERFAMILY	Protein kinase-like (PK-like)	531	806	IPR011009	-
	Pral4044g00093	817	CDD	STKc_MAP3K-like	564	806	-	-
	Pral4044g00093	817	ProSitePatterns	Protein kinases ATP-binding region signature.	564	585	IPR017441	GO:0005524
	Pral4044g00093	817	Pfam	Ethylene-responsive protein kinase Le-CTR1	59	253	-	-
	Pral4044g00093	817	MobiDBLite	consensus disorder prediction	445	467	-	-
	Pral4044g00093	817	MobiDBLite	consensus disorder prediction	480	517	-	-
	Pral4044g00093	817	MobiDBLite	consensus disorder prediction	364	384	-	-
	Pral4044g00093	817	FunFam	Serine/threonine-protein kinase isoform 1	548	636	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4044g00093	Pral-Chr4044	622040	635484	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4044g00093	1	813	MAP Kinase Kinase Kinase	AT3G58640	71.098	0.0	1184

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-1	Pral4044g00093		PK_Tyr_Ser-Thr	3e-61	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4044g00093	-		-	qsu:112032500	1345.1