Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4044g00089 ATGGCTGAGAGTGAGAGATCAATTTACATATCGGACGAAAAGAACAAGGAATATAGTAACGACAACAACGTTAGACACAAACCCTCCTCTTCCTTGTTTTCTTCTTCTCTGCTTCTTCAAAAGGGTGCGTTGTTTGACTTGAACGAAGAAGCTGTGAACGATCTTGGTGGTGACATTAATGGAGGATTGTCGTCGTCGTCGTCATTATCAGGAGAAGGTAATGTCAGTAGCAACAACTCAAGTTCAGAAGTGAAAGAGAGAACAACAAGTAGTGTAAGGCAATATGTGAGATCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTTGCTTTTGTTCGTGCTGTAGAAAGGCTTGGTGGACAGGAAAAAGCAACGCCCAAGTTGGTTTTACAGTTGATGAATGTGAGAGGACTTAGCATTGCGCATGTTAAGAGCCATTTGCAGATGTATCGAAGCAAGAAACTTGATGAGTCTGGCCAAGTTTTATCCCAAAATAGGGCAACATTATTGCAAGGACAGAGAGATCACATTTTGGATATGTACGAAAGATTTAGTGCTCATCAAGGAGGACACTTTGGGATTGATGGCTATCTACCAACACCACCCCTAGTTATGAAGCCAATATTCGACTTCAAATCTCATGGCTCTTCAAGATTTCAACCAGCAGGGACAAGATCAAGTTCATCAGTAGTAGGGTGGAACAACGACTTAGGGTTGTGTGAGGATGGCAAAGAGAGAACGATGATGACTCAGAGGAACAAGAAGATTATTGGAGGTTGTCCCCTATTATTTGAGGTTAACGACGATGATGCTAATATTAGAATGAGAAATGGACCTCATAGGCCAAACCTATTTCTTGAAGACAAGAAATGGCCTCCTCGTGAAAGAAATGAAAAGCCTTATTGGGATGACAAATATTGTCCGCGGAACGCCGCAAATTGCTTTATCAAGAGTAACCTTCAACACGAACCCACTTCCTGCAGCCCAATTTTCTCTTCCCAGGTTCATCATCATGATAAAAAAGATGTGACATCGCTACATTTCATCAGATATCAGAATCATCATTTATCAGAAGCAGGTGAAGTGAAAGGTCATCAAGTAGAGAGTTTGAAGGAGAAGAAGGAATCGCCCAGCTTTCTAAAGTCATGTTTAACACAAGATTCTGCCAATAATGTTGCAGACATGAACAATCTTGGGCCTGCAGGTTTAGAGCATTAA 1224 0.4167 MAESERSIYISDEKNKEYSNDNNVRHKPSSSLFSSSLLLQKGALFDLNEEAVNDLGGDINGGLSSSSSLSGEGNVSSNNSSSEVKERTTSSVRQYVRSKMPRLRWTPDLHLAFVRAVERLGGQEKATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRATLLQGQRDHILDMYERFSAHQGGHFGIDGYLPTPPLVMKPIFDFKSHGSSRFQPAGTRSSSSVVGWNNDLGLCEDGKERTMMTQRNKKIIGGCPLLFEVNDDDANIRMRNGPHRPNLFLEDKKWPPRERNEKPYWDDKYCPRNAANCFIKSNLQHEPTSCSPIFSSQVHHHDKKDVTSLHFIRYQNHHLSEAGEVKGHQVESLKEKKESPSFLKSCLTQDSANNVADMNNLGPAGLEH 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4044g00089 407 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 80 195 IPR046955 GO:0003700
Pral4044g00089 407 Gene3D - 100 157 - -
Pral4044g00089 407 FunFam Myb family transcription factor 99 157 - -
Pral4044g00089 407 MobiDBLite consensus disorder prediction 64 92 - -
Pral4044g00089 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 157 IPR017930 -
Pral4044g00089 407 SUPERFAMILY Homeodomain-like 99 155 IPR009057 -
Pral4044g00089 407 MobiDBLite consensus disorder prediction 1 29 - -
Pral4044g00089 407 MobiDBLite consensus disorder prediction 1 23 - -
Pral4044g00089 407 Pfam Myb-like DNA-binding domain 103 153 IPR001005 -
Pral4044g00089 407 NCBIfam myb-like DNA-binding domain, SHAQKYF class 101 156 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4044g00089 Pral-Chr4044 598955 603183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4044g00089 61 184 G2-like Transcription Factor Family AT2G42660 55.118 5.93e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4044g00089 Myb_DNA-binding 4.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4044g00089 - - pcin:129314274 466.463