Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4044g00081 ATGGAGACAGATGATGGGTATAAGAGGAAGGCGGAGATCGCCTTGGTAGTCATCGTGGTGCTCGCTTCCCTAGCCGTGGTTGCTTTGCTTGTGGCACTCAGCTACTATTGCTACATTCGCAACAAAGTCGCCCAGCGCCGCAAGAACCAGAAAAATGTTGACCATAGCGAGAAAAGTGAATTTGCAAATCTGCAAGTTGTTGCTGAAAAAGGACTTCAGGTGTTCACTTTTAAGCAGTTGCATTCTGCAACTGGGGGCTTCAGCAAGTCAAATGTGATTGGTCATGGTGGATTTGGATTTGTTTACCGGGGAGTACTCAATGATGGCCGCAAAGTTGCAATTAAGTTCATGGATCAAGCAGGAAAGCAGGGAGAAGAAGAATTTAAAGTAGAGGTTGAATTGCTAAGTCAGCTGCGTTCTCCATATTTGCTGGCATTGCTCGGGTACTGCTCTGATAATAATCATAAACTGCTGGTGTATGAGTTCATGGCCAATGGTGGTCTGCAGGAACATCTTTATCCTGTCAGCAACTCTAATATTATGCCTATGAAGTTGGATTGGGAAACCCGTTTACGAATAGCACTTGAAGCTGCAAAGGGTTTGGAATATCTTCATGAACATGTCAGTCCCCCCGTGATTCACAGGGATTTTAAGAGCAGCAACATTCTTCTGGACAAAAAGTTTCATGCAAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGATCTGATAAAGCTGGTGGACATGTCTCCACTCGAGTCTTGGGAACGCAGGGATATGTTGCTCCTGAATATGCGCTAACAGGGCATCTAACCACAAAATCAGATGTATACAGTTATGGCGTTGTTCTTTTGGAGCTGCTCACTGGCCGAGTACCAGTTGACATGAAGAGACCACCAGGAGAAGGCGTTCTTGTTTCTTGGGCTTTGCCCCTTCTAACTGATAGAGAAAAGGTGGTAAAGATTATGGATCCTGCATTGGAGGGTCAGTACTCCATGAAAGAGGTTGTCCAAGTAGCTGCCATTGCTGCGATGTGTGTGCAACCAGAGGCCGATTACAGGCCCCTCATGGCAGACGTTGTCCAGTCACTAGTTCCACTGGTGAAGACTCACAGATCAACCTCAAAGGTCGTGAGCTACTCTAGTTACCATGCCAATAAGATGTCGCCTGCTCAAGATTCAGTAAGAGCAAATGCATAA 1197 0.457 METDDGYKRKAEIALVVIVVLASLAVVALLVALSYYCYIRNKVAQRRKNQKNVDHSEKSEFANLQVVAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGFVYRGVLNDGRKVAIKFMDQAGKQGEEEFKVEVELLSQLRSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPVSNSNIMPMKLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREKVVKIMDPALEGQYSMKEVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTHRSTSKVVSYSSYHANKMSPAQDSVRANA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4044g00081 398 ProSiteProfiles Protein kinase domain profile. 87 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4044g00081 398 Gene3D Phosphorylase Kinase; domain 1 45 162 - -
Pral4044g00081 398 FunFam Receptor-like serine/threonine-protein kinase ALE2 163 381 - -
Pral4044g00081 398 FunFam Serine/threonine-protein kinase PBS1 54 162 - -
Pral4044g00081 398 SUPERFAMILY Protein kinase-like (PK-like) 69 363 IPR011009 -
Pral4044g00081 398 Pfam Protein kinase domain 88 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4044g00081 398 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Pral4044g00081 398 CDD STKc_IRAK 93 366 - -
Pral4044g00081 398 PANTHER OS07G0668900 PROTEIN 50 373 - -
Pral4044g00081 398 Gene3D Transferase(Phosphotransferase) domain 1 163 387 - -
Pral4044g00081 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4044g00081 Pral-Chr4044 548752 552037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4044g00081 1 389 Receptor kinase-like Gene Family AT3G58690 79.177 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pral4044g00081 Pkinase 3.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4044g00081 - - gmx:100804893 662.529