Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4044g00078 ATGTCTTCCATGCCGTTGGGGCCGCACCAGCACCAACCGCTGGCGGCGGTGGCAGCTCCCCAACCTCCAGCTCCGTTGCCGGCGCAAGCTGAGAATGACAAGGAAATGTCGGCTGCAGTTCTTGAGGGGAACGATGCAGTCACTGGCCACATAATCTCCACCACAATTGGAGGGAAAAATGGTGAACCTAAGCAGACCATCAGTTACATGGCAGAGCGTGTTGTTGGCACTGGTTCATTTGGAATTGTTTTCCAGGCAAAGTGTTTGGAGACTGGGGAAGCAGTGGCTATAAAGAAGGTCTTGCAGGATAGGCGTTACAAGAATCGTGAGCTGCAGTTAATGCGCTTAATGGATCACCCAAACGTCATTTCCCTGAAGCACTGTTTCTTCTCTACAACAAGCAGAGATGAACTTTTTCTCAATTTGGTTATGGAATATGTCCCTGAAACATTGTACCGAGTTCTAAAACACTATACTAGTATGAACCAAAGGATGCCTCTCATCTATGTGAAACTCTATACATATCAAATCTTTAGGGGACTAGCATACATCCATACGGTACCAGGAGTTTGCCATAGAGATGTGAAACCTCAAAATCTTTTGGTTGATCCTCTCACTCATCAAGTTAAGCTTTGTGATTTTGGAAGTGCAAAAGTTCTGGTCAATGGTGAATCAAACATTTCATACATATGTTCGCGTTACTATCGGGCTCCAGAACTAATATTTGGTGCAACAGAATACACAACGTCTATTGATATTTGGTCAGCTGGTTGCGTCCTTGCTGAGCTGCTTCTGGGTCAGCCATTGTTTCCAGGAGAAAATCAGGTGGACCAGCTTGTGGAAATCATCAAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGTTGCATGAACCCTAATTACACAGATTTTAGATTCCCTCAGGTTAAAGCTCATCCGTGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCAATTGACCTTATATCAAGGCTTCTCCAATATTCGCCTAGTCTGCGCTACACTGCGCTGCAAGCATGTGCACATCCTTTCTTTGATGAGCTCCGGGAGCCCAATGCACGACTACCCAATGGCCGCCCACTGCCTCCACTTTTCAATTTCAAACAGGAACTGTCTGGAGCATCGCCCGAATTGATAAGTAGGCTCATCCCAGAGCATATTAGGCGGCAGATTGGTCTCAGCTTCCCTCATCCCACTAGTACATAG 1230 0.4642 MSSMPLGPHQHQPLAAVAAPQPPAPLPAQAENDKEMSAAVLEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLKHYTSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVNGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQVKAHPWHKVFHKRMPPEAIDLISRLLQYSPSLRYTALQACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELISRLIPEHIRRQIGLSFPHPTST 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4044g00078 409 ProSitePatterns Protein kinases ATP-binding region signature. 75 99 IPR017441 GO:0005524
Pral4044g00078 409 FunFam Shaggy-related protein kinase kappa 149 396 - -
Pral4044g00078 409 CDD STKc_GSK3 64 356 IPR039192 -
Pral4044g00078 409 SMART serkin_6 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4044g00078 409 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4044g00078 409 FunFam Glycogen synthase kinase-3 beta 53 148 - -
Pral4044g00078 409 Gene3D Phosphorylase Kinase; domain 1 54 148 - -
Pral4044g00078 409 MobiDBLite consensus disorder prediction 1 31 - -
Pral4044g00078 409 SUPERFAMILY Protein kinase-like (PK-like) 68 380 IPR011009 -
Pral4044g00078 409 Gene3D Transferase(Phosphotransferase) domain 1 149 396 - -
Pral4044g00078 409 Pfam Protein kinase domain 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4044g00078 409 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 33 398 - -
Pral4044g00078 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4044g00078 Pral-Chr4044 526802 532119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4044g00078 73 391 MAP Kinase Gene Family AT3G59790 35.329 2.49e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pral4044g00078 Pkinase 5.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4044g00078 K14502 - qsu:111995841 743.421