LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4044g00047	ATGATTATTTCAAAGCCTAGCTTCTGCGTTCTTTTGGTTCTTCTCACGACATCAGTTAGTTCAAAAGATTCTGAAGAAACACACGAAGATTTCCTTTGCCAACTGCTTGATCCCACCTCCGGATTGTTGGATGAGGATACGGTACAGCAATTACGGACCACTTGCTCTGTGGATTTGATTCAGCTGAAGGAAGAAGTTAGAAACCTTGACTTATGCTTTCCACATGAATCATCATCCAGTTGCACCAATGATATTGATTCATTTTCAGCACGAGAAAACATCCAAAAATTGATTAATGCTTGCCATCCTCAGTTGAAGCAAATCTTTCTTCACTGTTTGAGAAAGAATAATCTTCCACTCCGAAGTGTAGCCGGTGATGAAAATGATGATTCCAGATCCAGTGATCCTAGAAGAAATCTGGATGATAAAAAAGATAAAAAGAAGAAGAAGAAGAAGAAGAAGAAAAGTGACAATAGCATGGTTATAATTGCTGTTGCTGCAGCTGGTGCATCAGTGACGCTACTAGTTGTACTGCTGTGTGTTTTGTGCTGCTGTTGTGCTGGTAAAAGCCAAGTTAGAAAATATGACGAGAGGCCCCTTCTCAGCGTGAGCAGGAGTGACTACTCTTCTACAGGTTCTTCTCCCAAATATTCTTCTGGAAATTCAGTAAGAGATCAGAAATTTGGGTTTCAATCACATGATAATAATTCAATCGACCACAAAAGGACCTCATCTCTTAATGGCAATTTTCCTGTTGGATCTGATGTGCAGGAAACTCCCTCACCAGCATTTGCTGGTACTGATGCTGCTGCCAGACCATCATTGGACCTGAAGCCGCCTCCTGGTAGGGTGGGAATCAGCCCTTTGAAACCTCCACCTGGAAGGCCAGATCTCCTTTCCCCTGAGCTACCTTCTAGTAATTCCGCTACTTCTACTCCTCCACCTCCTCCTCCTCCTGCACCCCCCCAGCCACCCAAAACTGCTGCTGGACCTCCTCCTCCTCCACCACCAGCACTACCTGGCGCCAAAAAAAGTGCTGGTGCACCACCACCACCACCAACTCCTCAGAATGGTAAAGGTCCTCCTCGACCACCTCCACCACTTGGTGTAAAGAGTGGTCCACGCCCTTTAGTTATACAGAAAAAATCAAGAGCTACAGAATCTGGAGGAGCTGCAGATTCAGAAGGTGGTGGTGCTCCTAAAGCTAAGTTAAAACCTTTTTTCTGGGATAAGGTTCAAGCCAACTCAGATCAAACAATGGTTTGGAATCAGCTTAAAGCAGGATCATTCCAGGTGGATGAAGAAATGATGGAAACACTTTTTGGCTATACCAATACAGATAAAAGCAAAGGTCCAGCCAAGAAAAGATCTGCCTCCTTGGATCAGGCACCTCAGTTTATCCAGATCATTGACTCAAAGAAAGCACAAAATTTGTCAATTCTATTGCGAGCTCTGAATGTGACTATGGAAGAAGTTTATGATGCACTTAGTGAAGGGAATGAGCTTCCCTCAGAATTTATCCAATCCTTGCTCAAGATGTCACCCACATCTGAGGAAGAACTTAAGCTTAGACTTTTCAATGGCAACCTCTCTCAACTTGGGCCTGCCGACCGGTTCCTGAAAGCCCTTGTTGATATTCCATTTGCTTTCAAACGACTGGAATCACTTCTTTTTATGGGTACTCTTCAAGAGGAGCTCACCTTCACCAGGGATGCTTTTGCAGTTTTAGAGGTGGCTAGTGCAGAACTAAAAGGAAGCCGGCTGTTCCTGAAGCTTCTAGAAGCTGTTCTCAAAACTGGCAACCGTATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAACTTGATACACTCCTTAAATTGTCTGATGTTAAAGGAGTAGATGGCAAAACTACACTCTTGCACTTTGTTGTTAAAGAAATAATCCGATCTGAGGGCATAAGAGCAGTTCGTGCGACAAAAGAGAGCAAGAGTTTCTCTAGCATAAAAACAGATGACCTGTTAGAGGAAGTCTCCACTGAATCTGAAGAGCGGTATCGGGAACTTGGTCTTCAGGTGGTATCGCGATTGAGCAGTGAACTTGAGAATGTGAAGAAAGCAGCAGCTCTAGATGCTGATGTTTTAACAGGAACTACTGCAAAACTTGGGTATTCTCTCTTGAAAACCAAAGAATTCTTAAACAGAGACCTCAATGAGCTAGATGAAGAAAGTAAAGGAGGGTTTTATCAGACAGTTGTGAGTTTTGTGGAGAATGCTGAAAGTGTTATCACGAGCTTGCTGGAAGAAGAGAAGAGGATCACAGCTATGGTGAAGAGTACAGGTGACTACTTCCATGGGAACAGCGGGAGAGATGAAGGGTTAAGACTGTTTGTGATTGTACGAGACTTCTTGGTCATTCTGGATAAAGTATGCAAGGAGGTTGGAGATGAACAGAAGAAGGCGGCGGCAGCAAAAGCTCCTAAACAAGAGCCTCCCAAGGCTCCTTCTACTGATACTCGCCCACCACCACATAAGCAGCTTCTTTCAGGGTTATCAGATAGGAGGATGGATGACTTTAGTTCAGATGATGAGAGTCCATAG	2586	0.4397	MIISKPSFCVLLVLLTTSVSSKDSEETHEDFLCQLLDPTSGLLDEDTVQQLRTTCSVDLIQLKEEVRNLDLCFPHESSSSCTNDIDSFSARENIQKLINACHPQLKQIFLHCLRKNNLPLRSVAGDENDDSRSSDPRRNLDDKKDKKKKKKKKKKSDNSMVIIAVAAAGASVTLLVVLLCVLCCCCAGKSQVRKYDERPLLSVSRSDYSSTGSSPKYSSGNSVRDQKFGFQSHDNNSIDHKRTSSLNGNFPVGSDVQETPSPAFAGTDAAARPSLDLKPPPGRVGISPLKPPPGRPDLLSPELPSSNSATSTPPPPPPPAPPQPPKTAAGPPPPPPPALPGAKKSAGAPPPPPTPQNGKGPPRPPPPLGVKSGPRPLVIQKKSRATESGGAADSEGGGAPKAKLKPFFWDKVQANSDQTMVWNQLKAGSFQVDEEMMETLFGYTNTDKSKGPAKKRSASLDQAPQFIQIIDSKKAQNLSILLRALNVTMEEVYDALSEGNELPSEFIQSLLKMSPTSEEELKLRLFNGNLSQLGPADRFLKALVDIPFAFKRLESLLFMGTLQEELTFTRDAFAVLEVASAELKGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVKEIIRSEGIRAVRATKESKSFSSIKTDDLLEEVSTESEERYRELGLQVVSRLSSELENVKKAAALDADVLTGTTAKLGYSLLKTKEFLNRDLNELDEESKGGFYQTVVSFVENAESVITSLLEEEKRITAMVKSTGDYFHGNSGRDEGLRLFVIVRDFLVILDKVCKEVGDEQKKAAAAKAPKQEPPKAPSTDTRPPPHKQLLSGLSDRRMDDFSSDDESP	861

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4044g00047	861	MobiDBLite	consensus disorder prediction	845	861	-	-
	Pral4044g00047	861	MobiDBLite	consensus disorder prediction	813	861	-	-
	Pral4044g00047	861	Coils	Coil	137	157	-	-
	Pral4044g00047	861	MobiDBLite	consensus disorder prediction	284	299	-	-
	Pral4044g00047	861	Pfam	Formin Homology 2 Domain	399	801	IPR015425	-
	Pral4044g00047	861	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	394	828	IPR015425	-
	Pral4044g00047	861	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	407	818	-	-
	Pral4044g00047	861	MobiDBLite	consensus disorder prediction	204	402	-	-
	Pral4044g00047	861	MobiDBLite	consensus disorder prediction	123	155	-	-
	Pral4044g00047	861	MobiDBLite	consensus disorder prediction	125	142	-	-
	Pral4044g00047	861	Gene3D	Formin, FH2 domain	399	835	IPR042201	-
	Pral4044g00047	861	PANTHER	FORMIN-RELATED	101	849	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Pral4044g00047	861	MobiDBLite	consensus disorder prediction	241	256	-	-
	Pral4044g00047	861	SMART	it6_source	394	817	IPR015425	-
	Pral4044g00047	861	MobiDBLite	consensus disorder prediction	204	233	-	-
	Pral4044g00047	861	MobiDBLite	consensus disorder prediction	308	372	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4044g00047	Pral-Chr4044	246047	252202	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4044g00047	390	852	FH2 protein (formin) Gene Family	AT5G54650	63.983	0.0	579

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4044g00047	-		-	pcin:129312728	835.099