Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4044g00006 ATGATGTCAAAGTCGTATACAAATCTTCTTGATTTGGCTTCAGGGAATTTTCCAGCAATGGGTAAAGAATCTAAGGAACGGAAGCGGATGCCAAGGGCTATGAGTGTTCCTGGAATGATCTCAGAACTTGACGATACTCTCAGTGTTTCTTCTGATAATCCATCAGCTGCTTCCAGTGATCGGATTATCATTGTTGCAAATCAGCTTCCTTTGAAAGGAAAGCGAAGAGAGGACAACAGAGGATGGAATTTCAGTTGGAATGAGGATTCATTGCTTTTACAACTAAAGGACGGTTTTCCAGAAGATATGGAGGTTCTTTATGTTGGGTCACTGCGGGTTGATGTTGATCCTGCTGAGCAGGATGATGTATCACAGTATTTGTTAGAGAAATTCAACTGTGTTCCTACTTTTCTGCCCCCTAACGTACTGGACAAATTTTATGATGGATTTTGCAAGAGGCAGTTATGGCCACTGTTTCATTACATGTTACCACTTTCAACTGATAAAAGCCAGCGCTTTGACCGCTCTGATTGGGAAGCCTATGTGTTGGCAAACAAACTTTTCTTTCAGAAGGTAGTTGAAATAATTAGCCCAGAGGATGATTATATTTGGATTCATGATTATCATTTGATGGTTCTGCCAACCTTTATAAGAAGGCGTTTTAACAGGGTCAAAATGGGATTTTTCCTTCATAGTCCCTTTCCATCGTCAGAGATATATAGGACTCTTCCTGTGAGGGAAGAGATACTAAAAGCTTTGCTTAACTCTGATATTATTGGTTTTCACACCTTTGATTATGCTCGTCATTTCCTTTCCTGTTGTAGTCGTATGTTGGGCCTGGAGTATCAGTCAAAGAGGGGCTACTTAGGGTTGGAATATTATGGAAGGACTATCAGTATAAAGATTATGCCAGTTGGAGTTCACATGGGTCGAATTGAATCAGTTATGAAAATGACAGATGAGGAGAGCAAGTTTGGGGAGCTCAAACAAGCATATGAAGGTAAAACAGTGCTGCTTGGCCTTGATGATTTGGACATTTTTAAAGGAATTAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGACAACATCCTAAATGGCAAGGAAGAGCTGTGCTGATACAGATTGTAAATCCACCTAGGGGCAGAGGGATACATCTAGATGAAATCCGAGATGAGATACAAGAATGCTGCAGCAGGATCAACAGAGTATTTGGGCGGCCTGGTTATCAACCAATTGTTTTTATCGATAGATCAGTTCCAATTACTGAAAAAGTTGCATACTACAGGATTGCTGAGTGTGTGGTTGTTACAGCTGTAAGGGACGGAATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGATTCTGAATCGTGTTCTGATGTTAGTGGATTGAAGAAGAGTATGCTTGTAATATCAGAATTTATTGGGTGTTCTCCTTCACTTAGTGGGGCTATCCGTGTCAACCCCTGGAACGTTGAAACAACTGCAGAAGCCATGAATGAGGCCATCTCAATGAATGATGAAGAGAAACAGCTGCGGCATGAAAAACATTATCGGTATGTTAGCACTCATGATGTGGCTTATTGGTCACGCAGTTTCCTGCAAGATATGGAGAGGGCTTGTGCAGACCTTCTAAGGAAAAGATGTTGGGGAATAGGGCTTAGTTTTGGATTCAGAGTTGTGGCACTTGATCCCAACTTTAGAAAGCTCTCAATCGATGCCATGGTCTCAGCTTACAAAAGGGCAAGGAGCAGGGCCATTTTGTTGGATTATGATGGTACTGTAATGCCCCAGAACTCCATTAATAAGAGTCCTACTCAGGAGGTCGTCTCCACCTTGAACACACTATGTGCAGACTCCAAAAATGTAGTTTTCATTGTTAGTGGAAGGGGGAGGGATAGCTTAAGCAGGTGGTTTACTCCCTGTGAAAAGCTTGGTATTGCAGCTGAGCACGGGTACTTCTTGAGATGGTCTCATAGTGAAGAATGGGAAATTTGTGGTAAGAGCTCCGAATTTGCATGGATGCAGATTGCTGAACCTGTAATGAGACTATATACAGAGTCAACTGATGGTTCTAGCATTGAAAAAAAGGAAAGTGCATTAGTCTGGCAATATAGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCACCTCGAGGGTGTTTTGGCCAATGAGCCTGTTGCTGTGAAGAGTGGTCAGTTCATTGTTGAAGTAAAACCCCAGGATGTGAGCAAAGGATTAGTTGCAGAAAAGATCTTTTCAACAATGGCTGAGAGAGGCAGACAGGCTGACTTTGTATTGTGTGTTGGTGATGACAGATCAGACGAGGACATGTTTGAAATGATCAGTGGTGCAATGTCTCGAAATATTCTTGCTGCCAACTGTTCAGTATATGCTTGCACAGTCGAACAAAAACCCAGCAAAGCAAAGTATTATGTGGATGATACTACTGAAGTAATAAGCATGCTAGAATCTTTGGCTGAAGAGTCAGAGGATTCAGATTCAAGCCCTTGA 2550 0.4173 MMSKSYTNLLDLASGNFPAMGKESKERKRMPRAMSVPGMISELDDTLSVSSDNPSAASSDRIIIVANQLPLKGKRREDNRGWNFSWNEDSLLLQLKDGFPEDMEVLYVGSLRVDVDPAEQDDVSQYLLEKFNCVPTFLPPNVLDKFYDGFCKRQLWPLFHYMLPLSTDKSQRFDRSDWEAYVLANKLFFQKVVEIISPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMGRIESVMKMTDEESKFGELKQAYEGKTVLLGLDDLDIFKGINLKILAMEQMLRQHPKWQGRAVLIQIVNPPRGRGIHLDEIRDEIQECCSRINRVFGRPGYQPIVFIDRSVPITEKVAYYRIAECVVVTAVRDGMNLTPYEYIACRQGISDSESCSDVSGLKKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMNDEEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACADLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRARSRAILLDYDGTVMPQNSINKSPTQEVVSTLNTLCADSKNVVFIVSGRGRDSLSRWFTPCEKLGIAAEHGYFLRWSHSEEWEICGKSSEFAWMQIAEPVMRLYTESTDGSSIEKKESALVWQYRDADLGFGSSQAKEMLDHLEGVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSTMAERGRQADFVLCVGDDRSDEDMFEMISGAMSRNILAANCSVYACTVEQKPSKAKYYVDDTTEVISMLESLAEESEDSDSSP 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4044g00006 849 Gene3D - 717 848 IPR023214 -
Pral4044g00006 849 Gene3D - 590 707 IPR023214 -
Pral4044g00006 849 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 840 IPR001830 GO:0003824|GO:0005992
Pral4044g00006 849 CDD GT20_TPS 61 544 IPR001830 GO:0003824|GO:0005992
Pral4044g00006 849 NCBIfam HAD-IIB family hydrolase 593 795 IPR006379 -
Pral4044g00006 849 Pfam Glycosyltransferase family 20 61 544 IPR001830 GO:0003824|GO:0005992
Pral4044g00006 849 SUPERFAMILY HAD-like 591 839 IPR036412 -
Pral4044g00006 849 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Pral4044g00006 849 Pfam Trehalose-phosphatase 594 828 IPR003337 GO:0003824|GO:0005992
Pral4044g00006 849 NCBIfam trehalose-phosphatase 588 839 IPR003337 GO:0003824|GO:0005992
Pral4044g00006 849 CDD HAD_TPP 592 831 - -
Pral4044g00006 849 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 313 - -
Pral4044g00006 849 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 849 - -
Pral4044g00006 849 Gene3D Glycogen Phosphorylase B; 53 314 - -
Pral4044g00006 849 Gene3D Glycogen Phosphorylase B; 315 528 - -
Pral4044g00006 849 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Pral4044g00006 849 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 547 - -
Pral4044g00006 849 FunFam Alpha,alpha-trehalose-phosphate synthase 315 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4044g00006 Pral-Chr4044 41549 46761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4044g00006 1 848 Trehalose Biosynthesis Gene Families AT1G06410 76.118 0.0 1350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4044g00006 K16055 - gmx:100811463 1479.92