Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4043g00004 ATGAGCATCCTTTCTTTCATATGCATCTTTACTTACATACTAAGCCCTTCTCTAAGAGTTTCCCTCGCAGCTGATTCCATTGCTGCATCTCAAAGCATCCCAGATGGCATGACCTTAGTTTCCCAAGGAGGAACCTTTGAACTGGGATTCTTCAGTCCTGGAAGCTTTAGCAAACGTTATTTGGGAATGTGGTACAAGAAGATCCCAGTTAGAACCATTGTGTGGGTGGCAAACCGCCAAACCTCAATCAATGGAACTTCCGGAATCCTAATGTTAAACAGTACAGGCAGTCTAGTCCTCAGCCAAAATGGCACCGTCGTTTGGTGTACAACCCCTCAAAGACAAGCAAGAAAACCAGTGGCTCAGCTTCTTGATTCTGGCAATCTTGTGGTGAAAGACGAGGAAGATGCAAATCCAGAAGCCTATTTGTGGCAAAGCTTTGATTACCCATCTGATACAATGTTGCCAGGTATGAAGATAGGGTGGGACCTCAGAAATGGTCTGAATAGGCGTCTCACAGCATGGAAGAGCCCAGAAGATCCATCTTCAGGAGATTTTTCTTGGGGCATAGAGATCTATAACTATCCTGAATCAGTTATGAACAAGGGACAAAAGAAGTATTACAGACCAGGACCTTGGAATGGCTTGTATCAAAGTGGTACACCAGAACTAAAGCCTAACTCTTTGTTTGATTACAACTTTGTCTTTGATCAGAATGAGGCCTACTACACTTATACTCTCAGAACTAACTCTTTAGTTTCAATATTAGTTATGAACCAAACCAGTTATGTTCGTTATCGTTATGTCTGGGTGGAAACAGATCAAAAGTGGAGGATTTATGCATCACGTCCAGGGGATTACTGTGACGCCTATGGCCTATGTGGAGCCAATGGGCATTGTATCATTACTGATTCTCCAGTTTGTCAATGTTTAAAAGGGTTCAGGCCTAAGTCACCAGAAATGTGGAACTCAATGGACTGGTCTCAAGGCTGTGTTCACAAAAGACCATTAAGCTGCAAATTCAAGCAAAAGGATGGGTTTCTAAAAGTGAGCGGCTTGAAACTTCCAGATACTACCCACACTTGGTTAAATCAGACTATTGGCTTAGAAGAATGCAGAACTAAGTGCTTAAATAACTGTTCTTGCATGGCATTTGCAAATTCAGATATTAGAGGGAAAGGAAGGGGATGTGCCTTATGGTTTGGAGATCTAATTGATATTAGACATATGGCAGATGGTGGGCAGGATCTATATATTCGAATGAATTCTTCAGAATTAGCTGAAGACGCAGAGCAAGGGCATAAGAAGTTAACAAAGAAAACTATTGCCATCATTGCCATTGCAACTTCGGTGATGCTTTTACTTGGGTGCAGTTGCATCCTCAGAGTCTACAAAAACTATAATGACAAAGTTAAAAGTGTAGATCAAGATCAGAACAATGGAAAACACTCTGAAGATTTGGATCTCCCATTGCTTGACTTATCAACTATTGTCATTGCCACTGGTAACTTCTCCATTAACAACAAAATAGGAGAAGGTGGTTTTGGACCTGTGTATTGGGGAAAATTGGTAAATGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAAAAGTTCAGGACAAGGAATAACTGAATTTAAGAATGAAGTAAAACTGGTTGCAGAACTCCAACACCGGAATCTTGTAAAGCTTCTAGGATGTTGCATTCAGGGAGAGGAAAATATGCTAGTTTATGAATACATGTCTAATAGCAGCCTAGACTCCTTCATTTTTGATGATACGAAAGGTGTGGTTCTAGATTGGTCTAAACGCTACCACATTATTTGTGGTATTGCTCGAGGACTTTTATATCTTCATCAAGATTCCAGACTGAGAATCATTCATAGGGATCTCAAGGCAAGTAACGTGTTACTTGATGACGCGCTGAACCCAAAGATATCTGATTTTGGATTGGCAAGAACTTGTGGGGGAGACCAAATTGAAGGAAGCACAAACAGAGTAGTAGGGACTTATGGCTACATGGCACCTGAATATGCCATTGATGGGGTATTTTCAATAAAATCCGATGTCTTCAGCTTTGGCATTTTGCTACTGGAGATCATATCTGGCAAGAGAAATAGAGGGTTTTATGATGCAAACCACAGCCAAAACCTTATTGGTCAAGCATGGAGAAAATGGAAAGAAGGTAAGGCTTTGGAACTGATTGACAAGAACGTTGAAAACTCATGCATTGCATCAGAAGTCCTACGTTGTATCCACATCAGCCTATTATGTGTTGGCGAACATCCAGAGGATAGGCCTAGCATGTCCTCAGTGGTTCTAATGCTGGGAAGTGAAATGGATTTGCCTAATCCTAGGCAACCAGGTTTCTATTTGAACAAGTTCTCAGTGGAATCAAATTCTTCCCAACCAGAATTTGGTACATCGAATGAGATGACAATTACTCAATTAATAGCCCGATGA 2460 0.4106 MSILSFICIFTYILSPSLRVSLAADSIAASQSIPDGMTLVSQGGTFELGFFSPGSFSKRYLGMWYKKIPVRTIVWVANRQTSINGTSGILMLNSTGSLVLSQNGTVVWCTTPQRQARKPVAQLLDSGNLVVKDEEDANPEAYLWQSFDYPSDTMLPGMKIGWDLRNGLNRRLTAWKSPEDPSSGDFSWGIEIYNYPESVMNKGQKKYYRPGPWNGLYQSGTPELKPNSLFDYNFVFDQNEAYYTYTLRTNSLVSILVMNQTSYVRYRYVWVETDQKWRIYASRPGDYCDAYGLCGANGHCIITDSPVCQCLKGFRPKSPEMWNSMDWSQGCVHKRPLSCKFKQKDGFLKVSGLKLPDTTHTWLNQTIGLEECRTKCLNNCSCMAFANSDIRGKGRGCALWFGDLIDIRHMADGGQDLYIRMNSSELAEDAEQGHKKLTKKTIAIIAIATSVMLLLGCSCILRVYKNYNDKVKSVDQDQNNGKHSEDLDLPLLDLSTIVIATGNFSINNKIGEGGFGPVYWGKLVNGQEIAVKRLSKSSGQGITEFKNEVKLVAELQHRNLVKLLGCCIQGEENMLVYEYMSNSSLDSFIFDDTKGVVLDWSKRYHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDALNPKISDFGLARTCGGDQIEGSTNRVVGTYGYMAPEYAIDGVFSIKSDVFSFGILLLEIISGKRNRGFYDANHSQNLIGQAWRKWKEGKALELIDKNVENSCIASEVLRCIHISLLCVGEHPEDRPSMSSVVLMLGSEMDLPNPRQPGFYLNKFSVESNSSQPEFGTSNEMTITQLIAR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4043g00004 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 4 766 - -
Pral4043g00004 819 SMART ntp_6 342 421 IPR003609 -
Pral4043g00004 819 Pfam S-locus glycoprotein domain 208 318 IPR000858 GO:0048544
Pral4043g00004 819 Gene3D - 19 147 IPR036426 -
Pral4043g00004 819 CDD PAN_AP_plant 336 420 - -
Pral4043g00004 819 Pfam PAN-like domain 341 407 IPR003609 -
Pral4043g00004 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Pral4043g00004 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 783 - -
Pral4043g00004 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 421 - -
Pral4043g00004 819 SMART serkin_6 504 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4043g00004 819 Gene3D Hepatocyte Growth Factor 338 419 - -
Pral4043g00004 819 Pfam D-mannose binding lectin 72 176 IPR001480 -
Pral4043g00004 819 Pfam Domain of unknown function (DUF3403) 778 819 IPR021820 GO:0004674
Pral4043g00004 819 CDD B_lectin 30 150 IPR001480 -
Pral4043g00004 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Pral4043g00004 819 Gene3D Phosphorylase Kinase; domain 1 464 579 - -
Pral4043g00004 819 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Pral4043g00004 819 Pfam Protein tyrosine and serine/threonine kinase 505 773 IPR001245 GO:0004672|GO:0006468
Pral4043g00004 819 SMART blect_4 30 150 IPR001480 -
Pral4043g00004 819 ProSiteProfiles Protein kinase domain profile. 504 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4043g00004 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Pral4043g00004 819 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Pral4043g00004 819 FunFam receptor-like serine/threonine-protein kinase SD1-8 475 579 - -
Pral4043g00004 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 147 - -
Pral4043g00004 819 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Pral4043g00004 819 CDD STKc_IRAK 510 775 - -
Pral4043g00004 819 Gene3D Transferase(Phosphotransferase) domain 1 580 783 - -
Pral4043g00004 819 SUPERFAMILY Protein kinase-like (PK-like) 488 790 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4043g00004 Pral-Chr4043 66020 69599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4043g00004 444 789 Receptor kinase-like Gene Family AT4G23230 57.349 1.00e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4043g00004 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4043g00004 - - gmx:100775648 1075.08