Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4043g00001 ATGCTTCAAGAGAATCTGGGTTCTCAAGAAAGTGGGATGGGTTTATCTCATCATCAACAAGTTGAGTGGAGAGAGAAACTATTGTTTTCAACAGATTCATCTTCAACTACGACTGAGCAGTACAGTACTACTTCCGGGGATAGCATAGTGACGACCAGCCAAGGCTTAGCTTGTAGTTTCCACATGGATTCTAATTCTTATTCTGCTGCAAATCCTTCAATATTACAGGGAATATTAGCTCCTGAAGCTTCTTCTTCTTCTTCCTCCTTCGACAATAACCATAATCGTGCCTGCTTCAATAACTTTCCCTATGGATCTAACAATAATGATCAGCTAATGGCTTCTAATTGGCCTAAGGTTTCTCAGTTTCTTAGGGCTTCGCCGCCGAAACAAACCCAACATCACGGTGGTGGTTGTGGTGGTAATAGCCAGTTGCAGTTTACGAACAACACAACCTTCTGGAACGCTTCTGAAGCTCCTCCTCATCATCATCATCAAGCCGCCATTAAAGAACCTCGAGCTTCCTTCTTCCCTTCCCTGCAGCCTCCTTTTCACTCGCCGAATTTTGATGCACAATCAAAGAATATTTGTGGAGGAAGAGAAACGAATAGTGTGGGGAAGAAAAGTGGTGGAGAAGCAGCACCAAAAAGGGCGAGAAACGAAACCTCATCGACTTTGCCACCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACCGGATTACTGCTCTTCAGCAGTTGGTTTCGCCTTTTGGGAAGACTGATACAGCCTCAGTGCTGTCTGAAGCCATCGAGTACATCAAATTCCTCCATGAACAAGTCTCTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCGCAGCACCAACAGAGTTCTGGGAAATGTAAGGACGGGGAAGCCCTAAAACAAGACCTGAGAAGCCGAGGGCTGTGTTTGGTGCCGGTTTCAAGCACTTTTCCAGTAACTCATGAAACCACTGTTGATTTTTGGATGCCAACTTTTGGAGCCACTTTCAGATAG 1020 0.449 MLQENLGSQESGMGLSHHQQVEWREKLLFSTDSSSTTTEQYSTTSGDSIVTTSQGLACSFHMDSNSYSAANPSILQGILAPEASSSSSSFDNNHNRACFNNFPYGSNNNDQLMASNWPKVSQFLRASPPKQTQHHGGGCGGNSQLQFTNNTTFWNASEAPPHHHHQAAIKEPRASFFPSLQPPFHSPNFDAQSKNICGGRETNSVGKKSGGEAAPKRARNETSSTLPPFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYMKSGAPQHQQSSGKCKDGEALKQDLRSRGLCLVPVSSTFPVTHETTVDFWMPTFGATFR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4043g00001 339 CDD bHLH_AtbHLH_like 226 277 IPR045239 -
Pral4043g00001 339 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 220 269 IPR011598 GO:0046983
Pral4043g00001 339 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 230 285 IPR036638 GO:0046983
Pral4043g00001 339 Gene3D - 230 290 IPR036638 GO:0046983
Pral4043g00001 339 SMART finulus 231 275 IPR011598 GO:0046983
Pral4043g00001 339 MobiDBLite consensus disorder prediction 197 227 - -
Pral4043g00001 339 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 71 320 - -
Pral4043g00001 339 FunFam Transcription factor bHLH123 family 230 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4043g00001 Pral-Chr4043 2174 5452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4043g00001 145 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 62.000 1.89e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4043g00001 - - gmx:100818424 362.459