Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4042g00013 ATGGCGGATGATCAATTTCAGGCTACTGGAAATTGGTGGGACTCCTGTTCAAGAAATGTGAGATTCGAATCCCAATCTTCTTCCTCAAACCTCACCACCTCCTTCGTCCCCAACTTCACTTGGAACAATATGGATCATCATCATGACCTCAAGCCTGGCTCTTCCATCTCTGATTCTCCCATGATCATGGGCTTAGGCCTCTCCTCAAACCCCATGGATTGGAACAATCAACCCTCACATAATAATCTCCTAAGAGCAGAGAATAAGGGGGTCTCCGATGGCCGATTCAGACCCATGCTTCAAGAGAATCTGGGTTCTCAAGAAAGTGGGATGGGTTTATCTCATCATCAACAAGTTGAGTGGAGAGAGAAACTATTGTTTTCAACAGATTCATCTTCAACTACGACTGAGCAGTACAGTACTACTTCCGGGGATAGTATAGTGACGACCAGCCAAGGCTTAGCTTGTAGTTTCCACATGGATTCTAATTCTTATTCTGCTGCAAATCCTTCAATATTACAGGGAATATTAGCTCCTGAAGCTTCTTCTTCCTCTTCCTCCTTCGACAATAACCACAATCGTGCCTGCTTCAATAACTTTCCCTATGGATCTAACAATAATGATCAGCTAATGGCTTCTAATTGGCCTAAGGTTTCTCAGTTTCTTAGGGCTTCGCCGCCGAAACAAACCCAACATCACGGTGGTGGTTGTGGTGGTAATAGCCAGTTGCAGTTTACGAACAACACAACCTTCTGGAACGCTTCTGAAGCTCCTCCTCATCATCATCATCAAGCCGCCATTAAAGAACCTCGAGCTTCCTTCTTCCCTTCCCTGCAGCCTCCTTTTCACTCGCCGAATTTTGATGCACAATCAAAGAATATTTGTGGAGGAAGAGAAACGAATAGTGTGGGGAAGAAAAGTGGTGGAGAAGCAGCACCAAAAAGGGCGAGAAACGAAACCTCATCGACTTTGCCACCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACCGGATTACTGCTCTTCAGCAGTTGGTTTCGCCTTTTGGGAAGACTGATACAGCCTCAGTGCTGTCTGAAGCCATCGAGTACATCAAATTCCTCCATGAACAAGTCTCTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCGCAGCACCAACAGAGTTCTGGGAAATGTAAGGACGGGGAAGCCCTAAAACAAGACCTGAGAAGCCGAGGGCTGTGTTTGGTGCCGGTTTCAAGCACTTTTCCAGTAACTCATGAAACCACTGTTGATTTTTGGATGCCAACTTTTGGAGCCACTTTCAGATAG 1314 0.4559 MADDQFQATGNWWDSCSRNVRFESQSSSSNLTTSFVPNFTWNNMDHHHDLKPGSSISDSPMIMGLGLSSNPMDWNNQPSHNNLLRAENKGVSDGRFRPMLQENLGSQESGMGLSHHQQVEWREKLLFSTDSSSTTTEQYSTTSGDSIVTTSQGLACSFHMDSNSYSAANPSILQGILAPEASSSSSSFDNNHNRACFNNFPYGSNNNDQLMASNWPKVSQFLRASPPKQTQHHGGGCGGNSQLQFTNNTTFWNASEAPPHHHHQAAIKEPRASFFPSLQPPFHSPNFDAQSKNICGGRETNSVGKKSGGEAAPKRARNETSSTLPPFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYMKSGAPQHQQSSGKCKDGEALKQDLRSRGLCLVPVSSTFPVTHETTVDFWMPTFGATFR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4042g00013 437 CDD bHLH_AtbHLH_like 324 375 IPR045239 -
Pral4042g00013 437 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 328 383 IPR036638 GO:0046983
Pral4042g00013 437 MobiDBLite consensus disorder prediction 296 322 - -
Pral4042g00013 437 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 134 418 - -
Pral4042g00013 437 FunFam Transcription factor bHLH123 family 328 390 - -
Pral4042g00013 437 SMART finulus 329 373 IPR011598 GO:0046983
Pral4042g00013 437 Gene3D - 328 388 IPR036638 GO:0046983
Pral4042g00013 437 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 367 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4042g00013 Pral-Chr4042 72308 76173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4042g00013 243 437 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 62.000 5.55e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4042g00013 - - gmx:100797286 415.616