Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4042g00011 ATGGGCTTTCATCATTTTGCAAGTATTATTACTATTGCTTGTATACTTCTCCTATATATGAAAGTTTCCTTAGCATTAGACTTCATTTCTCAGTCTCAATCCATTAGAGATGGTGTAACCTTAGTTTCCGAAAGTGGAACCTTTGAACTCGGATTTTTCAGTCCTGGAAATTCCAGCAAACGCTACCTGGGAATATGGTACAAGAATATCCCAATTCAAACGGTAGTTTGGGTCGCAAATCGCAACAACCCTATCAACGATTCTACCGGCATCTTAACACTAAACAGCACTGGAAATCTCGTCGTCGCTCAAAACCACACAGTCGTTTGGTCCACAACTTCTGTGAAAAACCCACAAAATCCAGTAGCCAGTCTATTGGAATCTGGAAATCTTGTGGTTAGAGAGGATAAAGAAGCAAACCCAGAAACATATTTGTGGCAGAGTTTTGATTACCCAACTGATACATTCTTACCAGGTATGAAATTTGGGTGGGACTTAAGAACTGGTCTAAATAGGCGTCTTGTAGCTTGGAAGAGTCCAGATGATCCTTCCACAGGAGATTTCTCTTGGGGAATGGTGCTCAATAATTATCCTGATGCCTATATGATGAAGGGAACCCGGAAATTCTACCGAGCTGGACCATGGAACGGCCTTCGTCCAAGTGGTTCACCACAAATCAAGGCTAACCCCATTTATGATTACCAGTTTGTCTCTAATAAGGATGAGATTTACTTCACGTATCAGCTCAACAATCATTCTGTAATCTCAAGACAGGTATTGAACATAACAACTCAGGCTCGTCAACGTTTTGTGTGGATAGAAGATCAACAAGTTTGGAGGCTATATCAAACAGTGCCATTGGACTATTGTGATAGTTACGGCCTCTGTGGAGCTTATGGAATCTGTACAATTTCAGGATCCCCAGTTTGTCAATGCTTGAAAGGGTTCAGGCCAAAGTCACCAAAAAATTGGAACTCCATGGATTGGTCTCAAGGATGTGTCCGGAATAAACCGCTAAGCTGCAAGGATGGCTTTGTCAAATTGAGTAATTTGAAGCTACCGGATACTGCACATACTTGGGTGGATGAGACGATCACTCTAGAAGGATGCAGAAACAAATGCTTGAACAATTGTTCTTGCATGGCCTATACGAATTCAGACATCAGAGGACAAGGTAGTGGCTGTGCCATGTGGTTTGGTGATCTAATTGATATTAGACAGTTTTCGGGTGGTGGGCAGGATTTGTATGTTCGAATGGCTGCTGTAGAATTAGGGGAAGTGCGTAGGAGCAAGAAGAAGCTGACTATAATAGTCGTCTCAACCTTGGGGTCAATTTCTGCGATGCTTTTACTCGGTTTTTGTTCTTATATCTACTGTGACCAGAGGAAGAAGACAGAGAAACCAGAAAACAAAGATCAGAACGAAGGGGCCAGGGTTGATGATTTGGATCTCCCATTGCTTGATTTTTCTGCTCTAGCTACTGCCACCAATAACTTCTCAGAGGAGAACAAGATTGGAGAAGGAGGTTTTGGACCTGTATACAAGGGAAGACTAGTACATGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAAAAGATCAGGACAAGGAATGGCTGAGTTCAAAAATGAAGTTAAATTGATAGTGAAACTTCAGCACCGAAATCTTGTAAAGCTTCTTGGTTGTTGCATTGAAGGGGAGGACAAAATGCTGGTGTATGAGTACATGCCTAACAGCAGCTTGGACTACTACATTTTTGATGACACCAAAGGCAAGGTGCTACATTGGCCTCAGCGCTTCAACATTATTTGTGGAATTGCTCGAGGTCTTCTTTATCTCCATCAAGATTCGAGATTGAGGATTATTCATAGGGATCTCAAACCAAGTAATATATTATTGGATGACAAGTTAAACCCAAAAATATCAGATTTTGGCATTGCTAAAATCTTTGGAGGAAACCAAATTGAAGACTACACAGAGCGAGTAATTGGGACTTACGGGTACATGGCACCAGAATATGCAGCTGATGGGCTTTTCTCTATAAAGTCTGATACATTTAGTTTTGGAGTGTTGATACTAGAGATTATTAGCGGGAAGAAAAGCCGAGGGTTTTATCATCCCGACCAATCCCTTAACCTTATATCTCATGCTTGGAGTCTGTGGAAAGAAGGAAGAGATTTTGAACTAATTGACTCAAAGATAGAGGAATCTTGCATTCTATCAGAAGTACAACGTTGCATCCATATTGGCCTCTTGTGTGTCCAGCGACACCCAGAAGATAGGCCAACCATGTCTTCTGTGGTCCTAATGTTGAGGAGTGGAACAAAATTGGCTCATCCTAAGGAGCCTGCTTTCTACACCAAGAAAGATTTCACTGAACCCAATTTCTTCTTAGCCCAAATGGAAAATAGTTCAACCAATGAATCAACTGTTACATTACCAGAAGCACGATGA 2451 0.4153 MGFHHFASIITIACILLLYMKVSLALDFISQSQSIRDGVTLVSESGTFELGFFSPGNSSKRYLGIWYKNIPIQTVVWVANRNNPINDSTGILTLNSTGNLVVAQNHTVVWSTTSVKNPQNPVASLLESGNLVVREDKEANPETYLWQSFDYPTDTFLPGMKFGWDLRTGLNRRLVAWKSPDDPSTGDFSWGMVLNNYPDAYMMKGTRKFYRAGPWNGLRPSGSPQIKANPIYDYQFVSNKDEIYFTYQLNNHSVISRQVLNITTQARQRFVWIEDQQVWRLYQTVPLDYCDSYGLCGAYGICTISGSPVCQCLKGFRPKSPKNWNSMDWSQGCVRNKPLSCKDGFVKLSNLKLPDTAHTWVDETITLEGCRNKCLNNCSCMAYTNSDIRGQGSGCAMWFGDLIDIRQFSGGGQDLYVRMAAVELGEVRRSKKKLTIIVVSTLGSISAMLLLGFCSYIYCDQRKKTEKPENKDQNEGARVDDLDLPLLDFSALATATNNFSEENKIGEGGFGPVYKGRLVHGQEIAVKRLSKRSGQGMAEFKNEVKLIVKLQHRNLVKLLGCCIEGEDKMLVYEYMPNSSLDYYIFDDTKGKVLHWPQRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDDKLNPKISDFGIAKIFGGNQIEDYTERVIGTYGYMAPEYAADGLFSIKSDTFSFGVLILEIISGKKSRGFYHPDQSLNLISHAWSLWKEGRDFELIDSKIEESCILSEVQRCIHIGLLCVQRHPEDRPTMSSVVLMLRSGTKLAHPKEPAFYTKKDFTEPNFFLAQMENSSTNESTVTLPEAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4042g00011 816 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00011 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 149 - -
Pral4042g00011 816 CDD PAN_AP_plant 338 420 - -
Pral4042g00011 816 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
Pral4042g00011 816 CDD STKc_IRAK 505 770 - -
Pral4042g00011 816 Gene3D Transferase(Phosphotransferase) domain 1 575 786 - -
Pral4042g00011 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 574 - -
Pral4042g00011 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 419 - -
Pral4042g00011 816 Gene3D Phosphorylase Kinase; domain 1 459 574 - -
Pral4042g00011 816 SMART blect_4 32 152 IPR001480 -
Pral4042g00011 816 Gene3D Hepatocyte Growth Factor 336 416 - -
Pral4042g00011 816 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Pral4042g00011 816 Pfam D-mannose binding lectin 74 178 IPR001480 -
Pral4042g00011 816 ProSiteProfiles PAN/Apple domain profile. 341 420 IPR003609 -
Pral4042g00011 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 183 IPR036426 -
Pral4042g00011 816 Pfam Protein tyrosine and serine/threonine kinase 502 768 IPR001245 GO:0004672|GO:0006468
Pral4042g00011 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 760 - -
Pral4042g00011 816 Pfam PAN-like domain 342 405 IPR003609 -
Pral4042g00011 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Pral4042g00011 816 SMART ntp_6 340 419 IPR003609 -
Pral4042g00011 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Pral4042g00011 816 ProSiteProfiles Protein kinase domain profile. 499 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00011 816 Gene3D - 21 149 IPR036426 -
Pral4042g00011 816 CDD EGF_CA 288 320 - -
Pral4042g00011 816 SUPERFAMILY Protein kinase-like (PK-like) 486 790 IPR011009 -
Pral4042g00011 816 Pfam S-locus glycoprotein domain 210 320 IPR000858 GO:0048544
Pral4042g00011 816 CDD B_lectin 32 152 IPR001480 -
Pral4042g00011 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4042g00011 Pral-Chr4042 55298 59097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4042g00011 434 784 Receptor kinase-like Gene Family AT4G23230 53.693 3.24e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4042g00011 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4042g00011 - - gmx:100778155 1106.66