Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4042g00010 ATGGACAATCTCTGTTTCATGAGCATCGTTGTTTATGTTCTTTTCTCTGGTTTCAAAGCTTCCATGGCAGTTAGTTCCATTCGTCAATCCCAAAACCTCAGTGACGCTTCAAGAACAACGTTAGTTTCCCAAGGTGGAAAATTTGAGCTTGGTTTCTTCACCCCAGGAAACTCTGGCAAACGCTACCTGGGAATTTGGTACAAGAAAATCCCACAAACTGTAGTCTGGGTAGCAAATAACATCAACCCAATAAACGACTCCTCTGGCGTATTGACGGTAAATGCCACCGGCAACCTCGTCCTGACCCAAAACAACACAGTCGTCTGGTACACTAATTTAACAAAGCAGGCTCAAGATCCAGTAGCAGAGCTCTTAGATTCTGGTAACTTTGTGGTAAGAGATGTAAATGAAGCAAACCCAGGAGTTTATTTGTGGCAAAGCTTCGATCACCCTTCCAATACATTACTTGCTGGGATGAAGCTGGGATGGGACCTGAAAAATCATCTGCATAGGAAAATAACTGCTTGGAAGAGCCCAAATGATCCAACGCCAAGTGGGTTTTCTTGGGAATTACTGCTGCATAACTATCCAGAGTTTTTCCTTATGAAGGGATCAGACAAGTTCATGAGAATCGGACCTTGGAATGGTTTATATTTCAGTGGCGTACCGGATTTAAAGCCAAACCCGATTTATGATTTCAACTTTGTATCCACTCCGGATGAGGTTTACTACATCTATAGCCTCAATAACACTTCTGTGATCTCAAGATTGATGATGAACCAAACCAAGTCTCAGGGTATACGTTATGTGTGGGTGGAAGCATATCAAAATTGGATAACTTATCAGTCACTGCCTAAGGATTATTGTGATAACTATAACCTCTGTGGACCAAATGGGGATTGCATTATCAGTGACTCACCTGTTTGCCAATGTTTGAAAGGGTTCAAGCCTAAGATACCACAAGCTTGGAACACAATGGATTGGTCAGGAGGATGTGTGAGAAACGAAGCATTGAACTGTAGCAATGGAGGCAAGGATGGGTTTATCAGATTGACTGGGTTGAAAGTGCCAGAAACTGAACACACCTGGGTAGATCAGAATATGAGTCTAGAAAGATGCAGAGAGGCGTGTCTAAGTAATTGTTCTTGCATGGCCTATACAAGTTCAAATATATCAGGAGCAGGCAGTGGCTGTGTTATGTGGTTTGGAGACTTAATTGATATCAGACAGTCTACTTCTGATGGGCAGGATCTGTTTATTCGAATGGCTATTTCCGAGCTAGAAGACGAAGGTGAGAGCAAGAAGAAACTGACAATAGCAATTGTCTCAATCTTGGGTGGAATTTCCGTGATGCTTTTACTAGGATTTTGTTGTTATCTCCACCAAGACCAGAGGAAGAGGAAGATGACTGATAAACCAGAAAACAATGAAGAAGACCAAAACCAGGGAGAAAGCGAGGATGATCTGGATCTACCATTGATTGACTTTTCAACAATAGCTGTTGCCACCAATGACTTCTCGTTAGAGAACAAGATTGGAGAAGGAGGTTTTGGACTTGTATATAGGGGAAAACTAGTCCATGGACAAGAGATTGCTGTTAAGAGGCTTTCAGGAAGCTCAAGGCAAGGAATAGTTGAGTTCAAGAATGAAGTAAAACTGATAGCGAAACTCCAGCACCGCAATCTTGTCAAGCTTATTGGTTGTTGCACCCAAGGAGAAGACAAAATGCTGGTGTATGAGTACATGCCAAATGGCAGCTTGGACTGTTTCATTTTCGATGATGAGAAAGGCAAAGTGCTAGATTGGTCTAAACGATTCCATATTATTTGTGGAATTGCTAGGGGTCTTGTCTATCTTCATCAAGATTCTAGATTAAGGATTATTCACCGAGATCTTAAAGCAAGTAATATCTTACTTGATGATAAATTAAATCCAAAAATATCAGATTTTGGCATTGCTAGAATTTTTGGAGGGGACCAAATAGAAGGAAACACAAAGCGAGTAGTTGGCACTTACGGATATATGGCACCAGAATATGCCATAGACGGCCTTTTCTCCGTGAAGTCGGATGCTTTTAGTTTTGGGATATTGTTGTTGGAGATTATAAGTGGAAAGAGAAGTAGAGGGTTCTATCATCCAAACCACTCCCTCAACCTAATTGGTCACGCTTGGAATCTATGGAAAGAAGGAAGATCAACAGAACTGATAGACTCAAACTTGGTGGAATCATGCAATCTATCGAAAGTACTACGTTGTATTCATGTTGGTCTCTTGTGTGTCCAACACTACCCAGAGGATAGGCCCACCATGCCTTCTGTGGTTCTAATGTTGGGAAGTGAAACTGAATTGCCTCAACCTAAAGCGCCTGGTTTCTATACAAAGAAGGACTTCGTTGAAACAAACTCCTACACAAGTCAAATGGAAATGAACTCTACCAATGAAGTAACCATTACCTTGTTAGAAGCTCGATGA 2472 0.415 MDNLCFMSIVVYVLFSGFKASMAVSSIRQSQNLSDASRTTLVSQGGKFELGFFTPGNSGKRYLGIWYKKIPQTVVWVANNINPINDSSGVLTVNATGNLVLTQNNTVVWYTNLTKQAQDPVAELLDSGNFVVRDVNEANPGVYLWQSFDHPSNTLLAGMKLGWDLKNHLHRKITAWKSPNDPTPSGFSWELLLHNYPEFFLMKGSDKFMRIGPWNGLYFSGVPDLKPNPIYDFNFVSTPDEVYYIYSLNNTSVISRLMMNQTKSQGIRYVWVEAYQNWITYQSLPKDYCDNYNLCGPNGDCIISDSPVCQCLKGFKPKIPQAWNTMDWSGGCVRNEALNCSNGGKDGFIRLTGLKVPETEHTWVDQNMSLERCREACLSNCSCMAYTSSNISGAGSGCVMWFGDLIDIRQSTSDGQDLFIRMAISELEDEGESKKKLTIAIVSILGGISVMLLLGFCCYLHQDQRKRKMTDKPENNEEDQNQGESEDDLDLPLIDFSTIAVATNDFSLENKIGEGGFGLVYRGKLVHGQEIAVKRLSGSSRQGIVEFKNEVKLIAKLQHRNLVKLIGCCTQGEDKMLVYEYMPNGSLDCFIFDDEKGKVLDWSKRFHIICGIARGLVYLHQDSRLRIIHRDLKASNILLDDKLNPKISDFGIARIFGGDQIEGNTKRVVGTYGYMAPEYAIDGLFSVKSDAFSFGILLLEIISGKRSRGFYHPNHSLNLIGHAWNLWKEGRSTELIDSNLVESCNLSKVLRCIHVGLLCVQHYPEDRPTMPSVVLMLGSETELPQPKAPGFYTKKDFVETNSYTSQMEMNSTNEVTITLLEAR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4042g00010 823 ProSiteProfiles Protein kinase domain profile. 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00010 823 Pfam Protein tyrosine and serine/threonine kinase 507 774 IPR001245 GO:0004672|GO:0006468
Pral4042g00010 823 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pral4042g00010 823 CDD STKc_IRAK 512 777 - -
Pral4042g00010 823 MobiDBLite consensus disorder prediction 468 488 - -
Pral4042g00010 823 Pfam Domain of unknown function (DUF3403) 780 823 IPR021820 GO:0004674
Pral4042g00010 823 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Pral4042g00010 823 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Pral4042g00010 823 Gene3D Phosphorylase Kinase; domain 1 465 581 - -
Pral4042g00010 823 SUPERFAMILY Protein kinase-like (PK-like) 491 777 IPR011009 -
Pral4042g00010 823 SMART ntp_6 343 422 IPR003609 -
Pral4042g00010 823 SMART blect_4 32 151 IPR001480 -
Pral4042g00010 823 SMART serkin_6 506 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00010 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Pral4042g00010 823 CDD B_lectin 40 151 IPR001480 -
Pral4042g00010 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Pral4042g00010 823 CDD PAN_AP_plant 338 423 - -
Pral4042g00010 823 Pfam PAN-like domain 340 408 IPR003609 -
Pral4042g00010 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 469 581 - -
Pral4042g00010 823 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Pral4042g00010 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Pral4042g00010 823 Gene3D Transferase(Phosphotransferase) domain 1 582 787 - -
Pral4042g00010 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 768 - -
Pral4042g00010 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 785 - -
Pral4042g00010 823 Gene3D - 20 149 IPR036426 -
Pral4042g00010 823 Pfam D-mannose binding lectin 73 177 IPR001480 -
Pral4042g00010 823 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Pral4042g00010 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4042g00010 Pral-Chr4042 48123 52872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4042g00010 451 823 Receptor kinase-like Gene Family AT4G23140 51.948 5.41e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4042g00010 PK_Tyr_Ser-Thr 8.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4042g00010 - - gmx:100775648 1092.8