Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4042g00009 ATGGCTGAGTTCAAAAATGAAGTTAAATTGATAGTGAAACTTCAGCACCGAAATCTTGTAAAGCTTCTTGGTTGTTGCATTGAAGGGGAGGACAAAATGCTGGTGTATGAGTACATGCCTAACAGCAGCTTGGACTACTACATTTTTGATGACACCAAAGGCAAGGTGCTACATTGGCCTCAGCGCTTCAACATTATTTGTGGAATTGCTCGAGGTCTTCTTTATCTCCATCAAGATTCGAGATTGAGGATTATTCATAGGGATCTCAAACCAAGTAATATATTATTGGATGACAAGTTAAACCCAAAAATATCAGATTTTGGCATTGCTAAAATCTTTGGAGGAAACCAAATTGAAGACTACACAGAGCGAGTAATTGGGACTTACGGGTACATGGCACCAGAATATGCAGCTGATGGGCTTTTCTCTATAAAGTCTGATACATTTAGTTTTGGAGTGTTGATACTAGAGATTATTAGCGGGAAGAAAAGCCGAGGGTTTTATCATCCCGACCAATCCCTTAACCTTATATCTCATGCTTGGAGTCTGTGGAAAGAAGGAAGAGATTTTGAACTAATTGACTCAAAGATAGAGGAATCTTGCATTCTATCAGAAGTACAACGTTGCATCCATATTGGCCTCTTGTGTGTCCAGCGACACCCAGAAGATAGGCCAACCATGTCTTCTGTGGTCCTAATGTTGAGGAGTGGAACAAAATTGGCTCATCCTAAGGAGCCTGCTTTCTACACCAAGAAAGATTTCACTGAACCCAATTTCTTCTTAGCCCAAATGGAAAATAGTTCAACCAATGAATCAACTGTTACATTACCAGAAGCACGATGA 843 0.4009 MAEFKNEVKLIVKLQHRNLVKLLGCCIEGEDKMLVYEYMPNSSLDYYIFDDTKGKVLHWPQRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDDKLNPKISDFGIAKIFGGNQIEDYTERVIGTYGYMAPEYAADGLFSIKSDTFSFGVLILEIISGKKSRGFYHPDQSLNLISHAWSLWKEGRDFELIDSKIEESCILSEVQRCIHIGLLCVQRHPEDRPTMSSVVLMLRSGTKLAHPKEPAFYTKKDFTEPNFFLAQMENSSTNESTVTLPEAR 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4042g00009 280 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00009 280 SMART serkin_6 2 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00009 280 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 39 242 - -
Pral4042g00009 280 Gene3D Transferase(Phosphotransferase) domain 1 39 252 - -
Pral4042g00009 280 Gene3D Phosphorylase Kinase; domain 1 1 38 - -
Pral4042g00009 280 PIRSF ILK 1 242 - -
Pral4042g00009 280 Pfam Protein tyrosine and serine/threonine kinase 2 232 IPR001245 GO:0004672|GO:0006468
Pral4042g00009 280 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 263 - -
Pral4042g00009 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Pral4042g00009 280 SUPERFAMILY Protein kinase-like (PK-like) 3 255 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4042g00009 Pral-Chr4042 42591 59097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4042g00009 3 248 Receptor kinase-like Gene Family AT4G11530 60.887 9.28e-106 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4042g00009 PK_Tyr_Ser-Thr 1.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4042g00009 - - gmx:100775648 414.846