Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4042g00008 ATGGCCATTCTTTCTCTTATAGTTGCTGTTACAAAACTGCTATTGATCTTCCCTCCCTTTTCTTCTGCATCTGATGTTATTACTCATGATCAGCCGCTCCCTGATGGAAGGACCTTGGTGTCTAAAGATGGGATCTTTGAATTGGGCTTCTTCAGCCCTGGTGGCTCCACACACCGATATGTTGGAATTTGGTACAAGAGCATCCCCCAGAAAACTGTTGTTTGGGTGGCCAACCGTGAAAAACCAGTCAAAGACAACTCAGGTATGTTGAGCATAAACACTGAGGGACGTCTTGTGCTTCTCAGCCGGAACCAGACTATTATTTGGTCAGCAAACTCAACGATACAAGGCTTGAATCCCATTGCACAGCTTCTAGACTCAGGAAACCTAGTACTGAGGAATGAACAAGACCAGAATCCTCAAAACTACCTATGGCAGAGTTTTGATTATCCCTCTGATACATTTTTACCAGGAATGAAGATAGGGTGGGACCTGAAAACTAGGCTGAATCGACGCCTAACAGCTTGGAGGAACTGGGATGACCCATCTCCTGGAGACTTCACTTGTGGTGTCGCCCTTGGTCCTATTCCTGAGTTAGTAATGTGGAAGGGCTCAGAAGAATTTCAAAGAAGTGGCCCTTGGAACGGAGTCAGCATTGGTGGCAAAACCACTCCCCTTTTCCAGCTGCAATTTGTCGTCAATGAAGACGAGGTGGTTTACACTTCTAATCTCCAGGACAAATCTGTGATTACAAGAGTTGTTCTAAACCAAACTGTTTATTTTCGTCAGCGTTACATCTGGGATGAACAAACCAAAAGTTGGATACTTTATTCATCTATACCAAAAGATAACTGTGACAGTTATAATCCTTGTGGCCCCAATGGAAATTGTATTGCAAGTGAATCACCACGTTGCCAGTGTTTAACAGGATTCAAGCCAAAATCACCTCAAAAGTATGATGCATTGGACTGGACTCAGGGATGTGTGCGCAGTGAACCATGGCGCTGTAGGGTCAGAGAAAAAGATGGTTTCAGAAAATTTAATGGGCTAAAAATGCCAGATACAAACATCTTGGTTAATGCAAGTATGAGACTTTCGGAGTGCAAGGCTAAATGCTGGGAAAATTGTTCCTGCAAGGCTTATGCAAACTTGTACATTACTGCAGGAGGCAGTGGTTGTATCCTTTGGTTTGATGATCTTATTGATTTGAGAGTGGCTACAGTCCCTTCGCAAGATCTTTTTATTCGAATGGCTTATTCTGATACTGTACTAGAAGATGCAGAAAAGCATAAGAAAAAGGTTGTCGTGGGAACAACAGTTACTTTTTCCTTGGTTCTCATGATGCTTTTGGCCTTCTTTTCCGTTCATTGGAAGAATAGAAAGCAAAGAGAGAAAATTTTGACCGGGAATAGTCACGAAGGAGAGCAAGAAGACATAGAGTTGCCTTTCTTTGACGTTGCCACAATTGTTCGTGCCACTAATGATTTCTCAAGTGACAAGAAGCTTGGCCAAGGTGGTTTTGGACCTGTATACAGGGGTACACTGGGAGATGGGCAAGAGATTGCTGTCAAAAGGTTATCTGAGGCATCTAGACAAGGATCGGAAGAATTCAAGAATGAAGTTATAATGTGTGCGAAACTTCAACACCGGAATCTTGTTAAAGTCCTTGGCTGTTGCATTCAAAGAGAGGAGAAAATGCTCATCTATGAATACATGCCCAACAAAAGTTTAGATACCATTCTTTTTGATTTTCGACAAAGTAAATCTCTGGATTGGCCACAACGTTTTCACATTATATTTGGAATTGTTCGAGGACTTCTCTATCTTCATCAAGATTCTCGGTTAAGAATCATACATAGAGATCTTAAAACAAGCAATATTCTGTTAGATAAGGATTTAAATCCGAAAATTTCTGATTTTGGTATTGCAAGAATGTTCGGAGGAGATCAAATGGAAGGAAATACAAAGAAAGTGATTGGCACATATGGTTATATGGCGCCAGAATATGCTGTCCAAGGAATATTTTCAATTAAATCTGATGTATTCAGTTTCGGTGTATTACTTCTAGAAATAATAAGTGGAAAGAAAAACCGAGGGGCTTCCTATCCAAACTACGGTTTTAATCTTATCAGCCATGCTTGGAGACTATGGAAGGAGGATAACTCAAAGGAACTAATAGATGCTTGTTTGGGGGACAACTTAAATTTATCAGAAGTATTACGTTGCATCCATGTGGCTCTTCTTTGTGTACAACTGCATCCTGAGGATAGGCCAAACATGGCGTTAGTATTAATAATGTTGAGCAGTGAGAGTGCCTTGCCTGAACCAAAGAAGCCTGGTTTCCTATTAGAAAGGACGTCAGCTGAAGGAGAGTATTGTTCTGACATGAAGATGATGTCTTCTTCAAGCACTGAAATAAGTATGACTCTGCCACAGCCTATAATGTCTCTTTCTGCATTGCAAAACACCGAGAATAGTTTTATGACCCATCCCAAGAACCTCAAAGTTCAACCCATGGATGTTCTCGGTTTCATGAGCATCGTTGTTTATGTTCTTGCCTCGGGTTTCAAAGCTTCCATGGCAGTTAGTTCCGTCCGTCCGTCCCAAAACATCAGTGACGCCTCAGGCACGACTTTAATTTCCCAAGGTGGAAACTTTGAGCTTGGTTTCTTCACCCCAGGAAACTCCGACAAACGCTACCTGGGAATTTGGTACAAGAAAATCCCACAAACTGTTGTCTGGGTAGCAAATAGCGTTAACCCGACTAACGACTCCTCCGGTGTATTAACGGTAAACGCCACTGGCAACCTCGTCCTCACACAGAACAAAACCATCCTTTGGCACACGAATTTAACAAGGCAGGCTCAGGATACAGTAGCAGAGCTCTTGGATTCTGGTAATTTTGTGGTGAGAGATGTAAATGAAGCAAACCCAGAAGTTTATTTGTGGCAAAGTTTCGATTATCCTTCTGATACATTGCTTCCTGGCATGAAGCTGGGATGGGACCTGAGAACACGTTTGAATAGGAAAATGACAGCTTGGAAGAGCCCAGATGATCCAACCCCAAGTGGGTTTTCTTGGGAATTATTGCTTCACAACTATCCTGAGTTTTTCCTCATGAAGGGATCAAAGAAGTTCATGAGAATTGGACCTTGGAATGGTTTATATTTCAGTGGCATACCAGATTTAAAGCCAAACCCAATCTATAATTTCAACTTTATATCCACTTCGGACGAGGTTTACTACACTTTTAGCCTTAACAACACTTCTGTGATATCAAGAATGGTGATGAACCAATCCACTTTTCAGGCCAATCGCTACGTGTGGGTTGAAGCAGATCAAAATTGGATGATTTATAAGTCACTACCTAAGGATTATTGTGATAACTATAACCTCTGTGGGCCAAATGGGAATTGTATTATCAGTGACTCCCCTGTTTGCCAGTGCTTGAAAGGATTCAAGCCTAAGATACCACAAGCTTGGAACACAATGGATTGGTCAGGAGGATGTGTGAGAAATAAAGCATTGAACTGTAATAATGGAAGCAAGGACGGGTTTATCAGATTGACTGGGTTGAAAATGCCAGAAACTAAACTCACTTGGACTGATCAGAGTATGAGTCTAGAGGGATGCAGAGAGAGGTGTCTGAGAAATTGTTCTTGCATGGCCTACACAAGTAAAAATATATCAGGAGCTGGAAGTGGCTGTGTTATGTGGTTTGGAGATTTAATTGATATCAGACACTTTCCGTCTGATCACCAGGAACTGTATATCCGAATGGCTATTTCGGAGCTAGATGAAGAACGTAGGAGAACGAAGAAGCTGACAATAATAATTGTCTCAACCTTGGGTGCAATTTCTGTGGTGCTTTTACTAGGCTTGTGTTTTTGTATCTACCAAGATCGAAGGATGAGGAAGATGACTGATAATCCAAAAGACAGCGAAGGAGATCAAAACAGAGGAGAAAGTGTGGATGATCTGGATCTCCTGGTGCTTGACTTTTCAACGCTCGCTATTGCCACTAATAACTTCTCATCAGAGAACAAAATTGGTGAAGGGGGTTTTGGACGTGTATATAGGGGAAAATTAGCACACGGGCAAGAGATTGCTGTTAAGAGGTGTTCAGGAAGCTCAAGGCAAGGAATAAATGAGTTCAAGAATGAAGTAAAATTGATAGCAAAACTACAACACCGGAATCTTGTGAAACTTTTTGGTTGTTGCATCCAAGGAGATGACAAGATGCTGGTGTATGAATACATGCCTAATGGGAGCTTGGATAGTTTCATTTTTGATGATACCAAAAGTAAGTGGCTGGATTGGCCTAAACGATTCCACATCATTTGTGGAATTGCACGAGGTCTTGTTTATCTACATCAAGATTCTAGATTGAGGATTATTCATCGAGATCTCAAAGCAAGTAATGTTTTACTTGATGATAAGTTAATTCCAAAAATATCAGATTTTGGCATAGCAAGAATCTTCGGAGCAGACCAAATTGAAGGAAATACAAAGCAAGTAGTTGGCACTTATGGGTATATGGCACCCGAATATGCAGCAGATGGTCTTTTTTCTGTAAAGTCAGATGTCTTCAGTTTTGGTATATTGTTGTTAGAGATTATAAGCGGGAAGAGAAGTAGAGGCTTTTATCATCCAGATCGCTCCCTTAACCTGATTGGTCATGCTTGGAATCTGTGGGAAGAAGGAAATGCAACAGAACTGATAGACTCAAACTTAGTGGAATCATGCAATCTATCAAAAGCACTACGTTGTATTCATGTTGGTCTCTTGTGTGTCCAACAATATCCAGAGAATAGGCCTACCATGCACTCTGTGGTTCTAATGTTAGGAAGTGAAACTGAATTGGCTCAACCTAAAGTGCCTGGTTTCTATACAAAGAAGGATTTCATTGAAACCAATTCACCCACAAGTCAAATGGAAGTTAGCTCCACCAACGAATTAACTATTACTTTATTAGAAGCTCGATGA 4986 0.4116 MAILSLIVAVTKLLLIFPPFSSASDVITHDQPLPDGRTLVSKDGIFELGFFSPGGSTHRYVGIWYKSIPQKTVVWVANREKPVKDNSGMLSINTEGRLVLLSRNQTIIWSANSTIQGLNPIAQLLDSGNLVLRNEQDQNPQNYLWQSFDYPSDTFLPGMKIGWDLKTRLNRRLTAWRNWDDPSPGDFTCGVALGPIPELVMWKGSEEFQRSGPWNGVSIGGKTTPLFQLQFVVNEDEVVYTSNLQDKSVITRVVLNQTVYFRQRYIWDEQTKSWILYSSIPKDNCDSYNPCGPNGNCIASESPRCQCLTGFKPKSPQKYDALDWTQGCVRSEPWRCRVREKDGFRKFNGLKMPDTRXILVNASMRLSECKAKCWENCSCKAYANLYITAGGSGCILWFDDLIDLRVATVPSQDLFIRMAYSDTVLEDAEKHKKKVVVGTTVTFSLVLMMLLAFFSVHWKNRKQREKILTGNSHEGEQEDIELPFFDVATIVRATNDFSSDKKLGQGGFGPVYRGTLGDGQEIAVKRLSEASRQGSEEFKNEVIMCAKLQHRNLVKVLGCCIQREEKMLIYEYMPNKSLDTILFDFRQSKSLDWPQRFHIIFGIVRGLLYLHQDSRLRIIHRDLKTSNILLDKDLNPKISDFGIARMFGGDQMEGNTKKVIGTYGYMAPEYAVQGIFSIKSDVFSFGVLLLEIISGKKNRGASYPNYGFNLISHAWRLWKEDNSKELIDACLGDNLNLSEVLRCIHVALLCVQLHPEDRPNMALVLIMLSSESALPEPKKPGFLLERTSAEGEYCSDMKMMSSSSTEISMTLPQPIMSLSALQNTENSFMTHPKNLKVQPMDVLGFMSIVVYVLASGFKASMAVSSVRPSQNISDASGTTLISQGGNFELGFFTPGNSDKRYLGIWYKKIPQTVVWVANSVNPTNDSSGVLTVNATGNLVLTQNKTILWHTNLTRQAQDTVAELLDSGNFVVRDVNEANPEVYLWQSFDYPSDTLLPGMKLGWDLRTRLNRKMTAWKSPDDPTPSGFSWELLLHNYPEFFLMKGSKKFMRIGPWNGLYFSGIPDLKPNPIYNFNFISTSDEVYYTFSLNNTSVISRMVMNQSTFQANRYVWVEADQNWMIYKSLPKDYCDNYNLCGPNGNCIISDSPVCQCLKGFKPKIPQAWNTMDWSGGCVRNKALNCNNGSKDGFIRLTGLKMPETKLTWTDQSMSLEGCRERCLRNCSCMAYTSKNISGAGSGCVMWFGDLIDIRHFPSDHQELYIRMAISELDEERRRTKKLTIIIVSTLGAISVVLLLGLCFCIYQDRRMRKMTDNPKDSEGDQNRGESVDDLDLLVLDFSTLAIATNNFSSENKIGEGGFGRVYRGKLAHGQEIAVKRCSGSSRQGINEFKNEVKLIAKLQHRNLVKLFGCCIQGDDKMLVYEYMPNGSLDSFIFDDTKSKWLDWPKRFHIICGIARGLVYLHQDSRLRIIHRDLKASNVLLDDKLIPKISDFGIARIFGADQIEGNTKQVVGTYGYMAPEYAADGLFSVKSDVFSFGILLLEIISGKRSRGFYHPDRSLNLIGHAWNLWEEGNATELIDSNLVESCNLSKALRCIHVGLLCVQQYPENRPTMHSVVLMLGSETELAQPKVPGFYTKKDFIETNSPTSQMEVSSTNELTITLLEAR 1662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4042g00008 1662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Pral4042g00008 1662 Pfam D-mannose binding lectin 912 1016 IPR001480 -
Pral4042g00008 1662 Pfam D-mannose binding lectin 72 177 IPR001480 -
Pral4042g00008 1662 Gene3D - 20 148 IPR036426 -
Pral4042g00008 1662 Gene3D - 860 987 IPR036426 -
Pral4042g00008 1662 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1309 1420 - -
Pral4042g00008 1662 CDD STKc_IRAK 1351 1616 - -
Pral4042g00008 1662 SUPERFAMILY Protein kinase-like (PK-like) 480 768 IPR011009 -
Pral4042g00008 1662 Gene3D Phosphorylase Kinase; domain 1 455 572 - -
Pral4042g00008 1662 Gene3D Phosphorylase Kinase; domain 1 1309 1420 - -
Pral4042g00008 1662 ProSiteProfiles Bulb-type lectin domain profile. 865 984 IPR001480 -
Pral4042g00008 1662 Pfam S-locus glycoprotein domain 210 315 IPR000858 GO:0048544
Pral4042g00008 1662 Pfam S-locus glycoprotein domain 1049 1157 IPR000858 GO:0048544
Pral4042g00008 1662 ProSitePatterns Protein kinases ATP-binding region signature. 1351 1373 IPR017441 GO:0005524
Pral4042g00008 1662 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 859 987 - -
Pral4042g00008 1662 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 776 - -
Pral4042g00008 1662 CDD B_lectin 30 151 IPR001480 -
Pral4042g00008 1662 ProSiteProfiles PAN/Apple domain profile. 1179 1262 IPR003609 -
Pral4042g00008 1662 FunFam Os04g0303100 protein 906 1047 - -
Pral4042g00008 1662 Gene3D Transferase(Phosphotransferase) domain 1 1421 1627 - -
Pral4042g00008 1662 Gene3D Transferase(Phosphotransferase) domain 1 573 777 - -
Pral4042g00008 1662 Pfam PAN-like domain 336 404 IPR003609 -
Pral4042g00008 1662 Pfam PAN-like domain 1179 1247 IPR003609 -
Pral4042g00008 1662 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1421 1624 - -
Pral4042g00008 1662 CDD B_lectin 876 990 IPR001480 -
Pral4042g00008 1662 SUPERFAMILY alpha-D-mannose-specific plant lectins 913 1021 IPR036426 -
Pral4042g00008 1662 ProSiteProfiles Protein kinase domain profile. 1345 1627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00008 1662 SMART ntp_6 339 418 IPR003609 -
Pral4042g00008 1662 SMART ntp_6 1182 1261 IPR003609 -
Pral4042g00008 1662 CDD PAN_AP_plant 1177 1262 - -
Pral4042g00008 1662 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pral4042g00008 1662 ProSiteProfiles PAN/Apple domain profile. 336 419 IPR003609 -
Pral4042g00008 1662 ProSiteProfiles Protein kinase domain profile. 497 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00008 1662 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Pral4042g00008 1662 SMART blect_4 30 151 IPR001480 -
Pral4042g00008 1662 SMART blect_4 871 990 IPR001480 -
Pral4042g00008 1662 FunFam Os04g0303100 protein 63 208 - -
Pral4042g00008 1662 SMART serkin_6 1345 1616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00008 1662 SMART serkin_6 497 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00008 1662 SUPERFAMILY Protein kinase-like (PK-like) 1331 1616 IPR011009 -
Pral4042g00008 1662 ProSiteProfiles EGF-like domain profile. 1124 1160 IPR000742 -
Pral4042g00008 1662 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
Pral4042g00008 1662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1466 1478 IPR008271 GO:0004672|GO:0006468
Pral4042g00008 1662 CDD PAN_AP_plant 342 419 - -
Pral4042g00008 1662 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 460 572 - -
Pral4042g00008 1662 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Pral4042g00008 1662 Pfam Protein tyrosine and serine/threonine kinase 1348 1614 IPR001245 GO:0004672|GO:0006468
Pral4042g00008 1662 Pfam Protein tyrosine and serine/threonine kinase 499 721 IPR001245 GO:0004672|GO:0006468
Pral4042g00008 1662 SMART egf_5 284 329 IPR000742 -
Pral4042g00008 1662 SMART egf_5 1127 1172 IPR000742 -
Pral4042g00008 1662 CDD STKc_IRAK 503 768 - -
Pral4042g00008 1662 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 863 1607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4042g00008 Pral-Chr4042 34472 45070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4042g00008 435 785 Receptor kinase-like Gene Family AT4G23230 51.420 5.70e-116 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4042g00008 PK_Tyr_Ser-Thr 6.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4042g00008 - - jre:109013535 1896.32