Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4042g00007 ATGGCCATTCTTCTTCCTCTCATCCTCGCTTTCATCACTTCATGCTCACTTTCTTCTGCAACTGATACTCTTACGCAGTCTCATTCACTTGTTGATCACGCAAATGGAACCACCACCTTGGTGTCCAGCGACGGAACCTTCGAACTCGGTTTCTTCTCCCCCGGCTCTTCCTCAAACCGCTACCTTGGCATCTGGTACAAAAATATCCCCGATACGACCGTCGTCTGGGTGGCCAACCGCCAAACGCCGCTCAGGAACGACAACAACTTCACAACGCCGAGTCGTTTGAGCATAACCGACGAGGGAGGTCTTGTGCTCCTCAGCCAAAACGGCACCGTGGTTTGGTCGGCAAACACGACGGTGAACAATCGAGGCGTAAGTGTTGTTGCGCAGCTTTTGGATTCAGGGAACTTGGTTCTGAGAAATGAACAGGATGAGGTTGATGTTGTTGATGATGCGAAGTATATATGGCAGAGTTTTGATTATCCGAGCGATACGTTTTTGCCTGGAATGAAGATTGGGTGGGATCTGAGAAGAGGAATTAACAGGGAATTGACGGCGTGGAAAAGTTGGGACGATCCTTCTGTTGGAGACTTGAGATGGGGCATGGTGGTCGGAGTGACGCCGGAGCTGGTGATGTGGAAGGGAGAAGAAGAGTATTATCGGAGTGGTCCTTGGAATGGAGTTATTTTCAGTGGGAAAACTACGCCAATCTTTGAGCTTCAGTTCGTCTCTAATCAAGATGAGGTGGTTTACACTTCCAAGCTGCAGAACAAATCGGTGATCACAAGGGTTGTATTGAACGGAACTACTTCTTATCGTCAGCGCTATAACTGGGTTGAGCAAACTAAAAGCTGGAGGCTTTACTCATCTGTGCCCAGAGATAATTGTGACAACTACAATCTCTGTGGCCCCTATGGAAATTGCATAGTTAATGACTCTCCCCCCTGCCAGTGTCTCTCAGGGTTCAAGCCAAAATCACCCCAAAACTACAGTGCTTTGGACTGGACCCAGGGATGTGTTCGCAGTGAATCTTGGAGCTGTGGGGTAAAAAATAGAGATGGGTTTCGAAGATTCAGTGGGTTGAAAATTCCTGACACTAGAAAAGCTTGGGTTAATGCAAGCATGACACTTGGGGTTTGCAGAATGAAATGCTTGGCAAATTGTTCCTGTACTGCTTATGCAAACTTGTATGTTACTGGGGGAGGTATTGGGTGTTTGATTTGGTTTGGTGAACTTATTGATTTGAGAGTGGCTTCCACTCCTGGGCAAGATCTATATATTCGAATGGCTGCCTCGGAAACTGATGCAAAAGGGCACAAGAAAATGGTGGGCATTGTGGTGACAGCGGTTACTGTTCCATTGGTTTTTCTGGCGCTTTTGGCTCTTTCTTGCACTCATTGGAGGAAAAGAAGGCGCAGAGAGAAAACCTCCCTAGAGAATAAGAGTGAAGGTGAACAAGAGGACTTAGACCTGCCATTCTACGACCTTGCTACAATTGTCCATGCCACTAATGACTTCTCAAATGACAAGAAGCTTGGCCAAGGTGGTTTTGGACCAGTATACAAGGGTATTTTAGCAGATGGACAAGAGATTGCTATCAAGAGGCTATCACAGAGCTCTGGACAAGGAACGAAAGAATTTAAGAATGAAGTGTCATTGTGTGCAAAACTTCAACACCGAAATCTTGTCAAGGTTCTTGGATGTTGCATCCAAGGAGAAGAGAAGATGCTCATCTATGAATACATGCCTAACAAAAGCCTAGACAACTTTTTATTTGATTCCAGGCAGAGCAAATTGCTAGACTGGCCAAGGCGCTTTCATATCATATTTGGAATTGCTCGAGGGCTTCTCTATCTTCACCAAGATTCTAGATTACGGATTATACATAGAGATCTTAAAGCAAGTAATATTTTGTTAGATGGGCAGATGAACCCGAAAATTTCAGATTTTGGCATGGCAAGAATGTTTGGTGGCGATCAAATTGAAGGGAATACAAATAGAATAGCTGGTACCTATGGTTATATGTCACCAGAATATGCCATTCATGGGTCATTCTCCATTAAATCGGATGTGTTTAGCTTTGGCATGTTATTATTGGAAATAGTAAGTGGAAAGAAAAACCGAGGAGCTTCTTATCCAAACCAGGGTTTTAACCTTATTGGACATGCATGGAGACTGTGGAAGGATGGCAACCCACTGGAATTAATTGATGGCTGTTTGGGGGAAGCTTTTAACTCATCAGAAGCACTGCGCTGTATTCGGGTTGGTCTTCTGTGTATGCAACTGCATCCTGAGGATAGGCCAGACATGGCCTCAGTAATTGTGATGTTGAGCAGTGAGAATGTGTTGCCTCAGCCTAAGGAGCCTGGTTTCTTGATAGAGAGGATTATGGTGGGAGAAGGATGTGCTTCTTCTGGCAACCAGATATCTTCTTCAACTAATGAAGTAACTGTGACTCAGTTGGAGGCCAGATAA 2478 0.4504 MAILLPLILAFITSCSLSSATDTLTQSHSLVDHANGTTTLVSSDGTFELGFFSPGSSSNRYLGIWYKNIPDTTVVWVANRQTPLRNDNNFTTPSRLSITDEGGLVLLSQNGTVVWSANTTVNNRGVSVVAQLLDSGNLVLRNEQDEVDVVDDAKYIWQSFDYPSDTFLPGMKIGWDLRRGINRELTAWKSWDDPSVGDLRWGMVVGVTPELVMWKGEEEYYRSGPWNGVIFSGKTTPIFELQFVSNQDEVVYTSKLQNKSVITRVVLNGTTSYRQRYNWVEQTKSWRLYSSVPRDNCDNYNLCGPYGNCIVNDSPPCQCLSGFKPKSPQNYSALDWTQGCVRSESWSCGVKNRDGFRRFSGLKIPDTRKAWVNASMTLGVCRMKCLANCSCTAYANLYVTGGGIGCLIWFGELIDLRVASTPGQDLYIRMAASETDAKGHKKMVGIVVTAVTVPLVFLALLALSCTHWRKRRRREKTSLENKSEGEQEDLDLPFYDLATIVHATNDFSNDKKLGQGGFGPVYKGILADGQEIAIKRLSQSSGQGTKEFKNEVSLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDNFLFDSRQSKLLDWPRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDGQMNPKISDFGMARMFGGDQIEGNTNRIAGTYGYMSPEYAIHGSFSIKSDVFSFGMLLLEIVSGKKNRGASYPNQGFNLIGHAWRLWKDGNPLELIDGCLGEAFNSSEALRCIRVGLLCMQLHPEDRPDMASVIVMLSSENVLPQPKEPGFLIERIMVGEGCASSGNQISSSTNEVTVTQLEAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4042g00007 825 Gene3D Transferase(Phosphotransferase) domain 1 583 786 - -
Pral4042g00007 825 SMART ntp_6 351 430 IPR003609 -
Pral4042g00007 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 470 582 - -
Pral4042g00007 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 194 IPR036426 -
Pral4042g00007 825 ProSiteProfiles Bulb-type lectin domain profile. 25 153 IPR001480 -
Pral4042g00007 825 CDD B_lectin 39 163 IPR001480 -
Pral4042g00007 825 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
Pral4042g00007 825 Gene3D - 16 160 IPR036426 -
Pral4042g00007 825 CDD STKc_IRAK 513 778 - -
Pral4042g00007 825 CDD PAN_AP_plant 347 431 - -
Pral4042g00007 825 SUPERFAMILY Protein kinase-like (PK-like) 491 785 IPR011009 -
Pral4042g00007 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 160 - -
Pral4042g00007 825 ProSiteProfiles PAN/Apple domain profile. 348 431 IPR003609 -
Pral4042g00007 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 769 - -
Pral4042g00007 825 SMART serkin_6 507 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00007 825 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00007 825 Gene3D Phosphorylase Kinase; domain 1 464 582 - -
Pral4042g00007 825 Pfam S-locus glycoprotein domain 221 327 IPR000858 GO:0048544
Pral4042g00007 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 786 - -
Pral4042g00007 825 Pfam D-mannose binding lectin 73 189 IPR001480 -
Pral4042g00007 825 Pfam Protein tyrosine and serine/threonine kinase 509 775 IPR001245 GO:0004672|GO:0006468
Pral4042g00007 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Pral4042g00007 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Pral4042g00007 825 Pfam PAN-like domain 348 416 IPR003609 -
Pral4042g00007 825 SMART blect_4 31 163 IPR001480 -
Pral4042g00007 825 Pfam Domain of unknown function (DUF3403) 779 825 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4042g00007 Pral-Chr4042 25154 30447 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4042g00007 436 793 Receptor kinase-like Gene Family AT4G23190 55.769 5.43e-136 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4042g00007 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4042g00007 - - gmx:100790436 1035.4