Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4042g00006 ATGGCCATTCTTCTTCCTCTCATCCTCGCTTTCATCACTTCATGCTCACTTTCTTCTGCAACTGATACTCTTACGCAGTCTCATTCACTTGTTGATCACGCAAATGGAACCACCACCTTGGTGTCCAGCGACGGAACCTTCGAACTCGGTTTCTTCTCCCCCGGCTCTTCCTCAAACCGCTACCTTGGCATCTGGTACAAAAATATCCCCGATACGACCGTCGTCTGGGTGGCCAACCGCCAAACGCCGCTCAGGAACGACAACAACTTCACAACGCCGAGTCGTTTGAGCATAACCGACGAGGGAGGTCTTGTGCTCCTCAGCCAAAACGGCACCGTGGTTTGGTCGGCAAACACGACGGTGAACAATCGAGGCGTAAGTGTTGTTGCGCAGCTTTTGGATTCAGGGAACTTGGTTCTGAGAAATGAACAGGATGAGGTTGATGTTGTTGATGATGCGAAGTATATATGGCAGAGTTTTGATTATCCGAGCGATACGTTTTTGCCTGGAATGAAGATTGGGTGGGATCTGAGAAGAGGAATTAACAGGGAATTGACGGCGTGGAAAAGTTGGGACGATCCTTCTGTTGGAGACTTGAGATGGGGCATGGTGGTCGGAGTGACGCCGGAGCTGGTGATGTGGAAGGGAGAAGAAGAGTATTATCGGAGTGGTCCTTGGAATGGAGTTATTTTCAGTGGGAAAACTACGCCAATCTTTGAGCTTCAGTTCGTCTCTAATCAAGATGAGGTGGTTTACACTTCCAAGCTGCAGAACAAATCGGTGATCACAAGGGTTGTATTGAACGGAACTACTTCTTATCGTCAGCGCTATAACTGGGTTGAGCAAACTAAAAGCTGGAGGCTTTACTCATCTGTGCCCAGAGATAATTGTGACAACTACAATCTCTGTGGCCCCTATGGAAATTGCATAGTTAATGACTCTCCCCCCTGCCAGTGTCTCTCAGGGTTCAAGCCAAAATCACCCCAAAACTACAGTGCTTTGGACTGGACCCAGGGATGTGTTCGCAGTGAATCTTGGAGCTGTGGGGTAAAAAATAGAGATGGGTTTCGAAGATTCAGTGGGTTGAAAATTCCTGACACTAGAAAAGCTTGGGTTAATGCAAGCATGACACTTGGGGTTTGCAGAATGAAATGCTTGGCAAATTGTTCCTGTACTGCTTATGCAAACTTGTATGTTACTGGGGGAGGTATTGGGTGTTTGATTTGGTTTGGTGAACTTATTGATTTGAGAGTGGCTTCCACTCCTGGGCAAGATCTATATATTCGAATGGCTGCCTCGGAAACTGATGCAAAAGGGCACAAGAAAATGGTGGGCATTGTGGTGACAGCGGTTACTGTTCCATTGGTTTTTCTGGCGCTTTTGGCTCTTTCTTGCACTCATTGGAGGAAAAGAAGGCGCAGAGAGAAAACCTCCCTAGAGAATAAGAGTGAAGGTGAACAAGAGGACTTAGACCTGCCATTCTACGACCTTGCTACAATTGTCCATGCCACTAATGACTTCTCAAATGACAAGAAGCTTGGCCAAGGTGGTTTTGGACCAGTATACAAGGGTATTTTAGCAGATGGACAAGAGATTGCTATCAAGAGGCTATCACAGAGCTCTGGACAAGGAACGAAAGAATTTAAGAATGAAGTGTCATTGTGTGCAAAACTTCAACACCGAAATCTTGTCAAGGTTCTTGGATGTTGCATCCAAGGAGAAGAGAAGATGCTCATCTATGAATACATGCCTAACAAAAGCCTAGACAACTTTTTATTTGGTCCGTGTATATGCAGAATCTTGTCTTTAGCAGAATGGCAGAGCAAATTGCTAGACTGGCCAAGGCGCTTTCATATCATATTTGGAATTGCTCGAGGGCTTCTCTATCTTCACCAAGATTCTAGATTACGGATTATACATAGAGATCTTAAAGCAAGTAATATTTTGTTAGATGGGCAGATGAACCCGAAAATTTCAGATTTTGGCATGGCAAGAATGTTTGGTGGCGATCAAATTGAAGGGAATACAAATAGAATAGCTGGTACCTATGGTTATATGTCACCAGAATATGCCATTCATGGGTCATTCTCCATTAAATCGGATGTGTTTAGCTTTGGCATGTTATTATTGGAAATAGTAAGTGGAAAGAAAAACCGAGGAGCTTCTTATCCAAACCAGGGTTTTAACCTTATTGGACATGCATGGAGACTGTGGAAGGATGGCAACCCACTGGAATTAATTGATGGCTGTTTGGGGGAAGCTTTTAACTCATCAGAAGCACTGCGCTGTATTCGGGTTGGTCTTCTGTGTATGCAACTGCATCCTGAGGATAGGCCAGACATGGCCTCAGTAATTGTGATGTTGAGCAGTGAGAATGTGTTGCCTCAGCCTAAGGAGCCTGGTTTCTTGATAGAGAGGATTATGGTGGGAGAAGGATGTGCTTCTTCTGGCAACCAGATATCTTCTTCAACTAATGAAGTAACTGTGACTCAGTTGGAGGCCAGATAA 2508 0.4498 MAILLPLILAFITSCSLSSATDTLTQSHSLVDHANGTTTLVSSDGTFELGFFSPGSSSNRYLGIWYKNIPDTTVVWVANRQTPLRNDNNFTTPSRLSITDEGGLVLLSQNGTVVWSANTTVNNRGVSVVAQLLDSGNLVLRNEQDEVDVVDDAKYIWQSFDYPSDTFLPGMKIGWDLRRGINRELTAWKSWDDPSVGDLRWGMVVGVTPELVMWKGEEEYYRSGPWNGVIFSGKTTPIFELQFVSNQDEVVYTSKLQNKSVITRVVLNGTTSYRQRYNWVEQTKSWRLYSSVPRDNCDNYNLCGPYGNCIVNDSPPCQCLSGFKPKSPQNYSALDWTQGCVRSESWSCGVKNRDGFRRFSGLKIPDTRKAWVNASMTLGVCRMKCLANCSCTAYANLYVTGGGIGCLIWFGELIDLRVASTPGQDLYIRMAASETDAKGHKKMVGIVVTAVTVPLVFLALLALSCTHWRKRRRREKTSLENKSEGEQEDLDLPFYDLATIVHATNDFSNDKKLGQGGFGPVYKGILADGQEIAIKRLSQSSGQGTKEFKNEVSLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDNFLFGPCICRILSLAEWQSKLLDWPRRFHIIFGIARGLLYLHQDSRLRIIHRDLKASNILLDGQMNPKISDFGMARMFGGDQIEGNTNRIAGTYGYMSPEYAIHGSFSIKSDVFSFGMLLLEIVSGKKNRGASYPNQGFNLIGHAWRLWKDGNPLELIDGCLGEAFNSSEALRCIRVGLLCMQLHPEDRPDMASVIVMLSSENVLPQPKEPGFLIERIMVGEGCASSGNQISSSTNEVTVTQLEAR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4042g00006 835 Pfam Protein tyrosine and serine/threonine kinase 509 785 IPR001245 GO:0004672|GO:0006468
Pral4042g00006 835 SMART ntp_6 351 430 IPR003609 -
Pral4042g00006 835 Gene3D Transferase(Phosphotransferase) domain 1 583 796 - -
Pral4042g00006 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 194 IPR036426 -
Pral4042g00006 835 PIRSF SRK 1 835 IPR024171 GO:0004674
Pral4042g00006 835 Pfam D-mannose binding lectin 73 189 IPR001480 -
Pral4042g00006 835 Gene3D Phosphorylase Kinase; domain 1 464 582 - -
Pral4042g00006 835 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 779 - -
Pral4042g00006 835 ProSiteProfiles Bulb-type lectin domain profile. 25 153 IPR001480 -
Pral4042g00006 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 470 582 - -
Pral4042g00006 835 CDD B_lectin 39 163 IPR001480 -
Pral4042g00006 835 Pfam S-locus glycoprotein domain 221 327 IPR000858 GO:0048544
Pral4042g00006 835 ProSiteProfiles Protein kinase domain profile. 507 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00006 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 796 - -
Pral4042g00006 835 Pfam PAN-like domain 348 416 IPR003609 -
Pral4042g00006 835 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
Pral4042g00006 835 Gene3D - 16 160 IPR036426 -
Pral4042g00006 835 CDD STKc_IRAK 513 788 - -
Pral4042g00006 835 Pfam Domain of unknown function (DUF3403) 789 835 IPR021820 GO:0004674
Pral4042g00006 835 CDD PAN_AP_plant 347 431 - -
Pral4042g00006 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 160 - -
Pral4042g00006 835 SUPERFAMILY Protein kinase-like (PK-like) 491 788 IPR011009 -
Pral4042g00006 835 SMART serkin_6 507 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00006 835 ProSiteProfiles PAN/Apple domain profile. 348 431 IPR003609 -
Pral4042g00006 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Pral4042g00006 835 SMART blect_4 31 163 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4042g00006 Pral-Chr4042 25154 30448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4042g00006 433 815 Receptor kinase-like Gene Family AT4G23190 53.571 1.25e-133 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4042g00006 PK_Tyr_Ser-Thr 7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4042g00006 - - gmx:100790436 1028.08