Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4042g00003 ATGTGCCTCATCAGGATCAGGGGTATACTTATTTATTCTAGTGTAGACCAATTCATTACATCCATGGCTATCCTTCCTTATTGGCTTGTTCTTCCCAATCTGCTTTTGTTCTTCTCCAGATTTTCTTTTGCAACTGATACCCTCACCCAGTTCGAGTCTCTTCCTGACGGCCAGACCTTGGTTTCTGAAAATGAAATCTTCGAATTGGGTTTCTTCAGCCCTGGAAGTTCCACCGACCGCTATGTTGGAATCTGGTACCACGAGATCCCAGGTACAACTGTTGTCTGGGTTGCCAACCGTGGCAGACCCATCAAAAACAACTCTGGCATGTTGAGCATAAACACAGAGGGACGTCTTGTGCTGCTCGGCCAGAATGAGACAGTTGTTTGGTCAGCAAATTCCACCACAAAGGCCTGGAGTCCAATTTTGCAGCTTTTAGGCTCTGGAAACTTGGTTCTAAGAGATGGGAAAGATCAAAAGCCCCAAACCTACTTGTGGCAAAGCTTCGACTATCCTTCTGATACAATCTTGCCAGGAATGAAGTTTGGATGGGACCTGAGAACTGGTCTTAATCGACGTTTTACAGCATGGAAGAATTGGGATGACCCTTCTTTTGGAGACTTTACAGCAGAGCTTGTACTACACAACTATCCTGATTTAGTAAACCGGCAGGGCCCAACAGAGTATATGAGGAGTGGCCCCTGGAATGGTGTCCGGTTCAGTGGCATCTCCTATGCGACAAGCAATCCGCTTTATGAAGCAACGTTTGTCTGGAACAAAGATGAGGTTTATTCAATGCATACTCTCAAAAATAAGTCATTGATCACAAGATTTGTCTACAACCAAACATTATACTCACTACTGGACGTAATATGGAGTGAAGATGATCAGAGGTGGATTACATTTAGTTTTGCGCCAATTGATAATTGCGACAGATATAATCGTTGCGGCCCAAATGGAAACTGCGTCCTGGGTGAGACACCAATATGCCAGTGCTTGACAGGATTCTTGCCAAAATCACCCAAAAATTGGAATGCAATGGACTGGTCTCAAGGATGCATCCGCAATGAATCATGGAGTTGCAAGGAAAAAAACAGGGATTATTTTGTCAAATTTAGTGGGCTCAAATTCCCAGATACTACATATTCTTGGGTTAATGCAAGTATGACGCTTGAGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTAATGCTTATGCTAATTTAGATATCAGGGGAGGAGGTAGCGGTTGTGCTATGTGGTTCGGTGATTTAATTGATATAAGGCAGATTCCCTTTGATGACCAAAATTTGTATATTCGCCTTGCTTCTCCAGAAACAGCTGAACAGGATGAGGCTAATGGAAATAAGACAAAGGTGATTGCTGTAACAGTGCCCACTATATTGGCTGTGGTGATGCTTTTCACTTTGTTATACATTTACAAGCGCAGAAGAAACTCTAAAGCAACCAAGGAAGAAGGCTCTGACAGAAACATGGAGCTAAAAAACTTGCTAGCAGTAGACAAAGAAGAAGGCCGTGAAGGAAATATGGAGCAACGTATCTATGACCTTGCATTAATAGCTAATGCTACCAATAACTTCTCATCGGACAACAAGCTTGGCCAAGGTGGTTTTGGTCCTGTATACAGGGGTATACTTGCGGACGGACAAGAAATTGCAGTGAAACGGCTTTCACGAAGTTCTTGCCAAGGGCTGTGTGAGTTTAAGAACGAAGTTAAATTGTGTGCCAAACTCCAGCACCGTAATCTTGTCAAGGTTCTTGGTTGTTGCATTCAAGGAGAGGAGATAATGCTCATATATGAATACATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTTCTGAAACTAAGCTTCTTGATTGGTCCAAGCGCTTTCACATTGTCCGTGGAATTGCTCGAGGCCTTATGTATCTTCATCAAGATTCTAGACTAAGAATCATCCATAGAGACCTTAAAGCAAGTAATATATTATTAGATAGTGAATTAAATCCAAAAATCTCAGATTTCGGTCTAGCAAGAATATTTGGAGGGGATCAAATTGAAGATAACACCAAACAAATTGTTGGTACATATGGTTATATGGCTCCTGAATATGCAATTCATGGACTCTTCTCAATCAAATCTGATGTATTCAGCTTCGGGGTGTTATTGTTAGAAATAGTGAGTGGCATGAAAAACAGGGGGCCCTTCTTACCAAGTCAAAGCGTTAATCTTATTGGACATGCATGGAGGTTGTGGAATGAGGGAATCCCACTAAAATTCGCTGATGGACGTTTGGGGAAGTCTTGTGTTGAATCAGAAGTCGTGCGATGCATCCACATCGGTCTTCTTTGTTTGCAGTACCATGCTGATGATAGGCCAGACATGCCATCTGTAGTTATAATGTTGAGTAGTGAGGGTGTCTTGCCTAAGCCTAAAGAACCTGGTTTCCTTTTAGAAAACATTGCAGTTAAGGGAGAATCTTCTAACAATCATACCACTCCGTCAAGTAATGAAACATCTATCACCTTGTTAGAAGCCAGGTAG 2553 0.4211 MCLIRIRGILIYSSVDQFITSMAILPYWLVLPNLLLFFSRFSFATDTLTQFESLPDGQTLVSENEIFELGFFSPGSSTDRYVGIWYHEIPGTTVVWVANRGRPIKNNSGMLSINTEGRLVLLGQNETVVWSANSTTKAWSPILQLLGSGNLVLRDGKDQKPQTYLWQSFDYPSDTILPGMKFGWDLRTGLNRRFTAWKNWDDPSFGDFTAELVLHNYPDLVNRQGPTEYMRSGPWNGVRFSGISYATSNPLYEATFVWNKDEVYSMHTLKNKSLITRFVYNQTLYSLLDVIWSEDDQRWITFSFAPIDNCDRYNRCGPNGNCVLGETPICQCLTGFLPKSPKNWNAMDWSQGCIRNESWSCKEKNRDYFVKFSGLKFPDTTYSWVNASMTLEECKAKCWENCSCNAYANLDIRGGGSGCAMWFGDLIDIRQIPFDDQNLYIRLASPETAEQDEANGNKTKVIAVTVPTILAVVMLFTLLYIYKRRRNSKATKEEGSDRNMELKNLLAVDKEEGREGNMEQRIYDLALIANATNNFSSDNKLGQGGFGPVYRGILADGQEIAVKRLSRSSCQGLCEFKNEVKLCAKLQHRNLVKVLGCCIQGEEIMLIYEYMPNKSLDSFIFGSETKLLDWSKRFHIVRGIARGLMYLHQDSRLRIIHRDLKASNILLDSELNPKISDFGLARIFGGDQIEDNTKQIVGTYGYMAPEYAIHGLFSIKSDVFSFGVLLLEIVSGMKNRGPFLPSQSVNLIGHAWRLWNEGIPLKFADGRLGKSCVESEVVRCIHIGLLCLQYHADDRPDMPSVVIMLSSEGVLPKPKEPGFLLENIAVKGESSNNHTTPSSNETSITLLEAR 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4042g00003 850 ProSiteProfiles Bulb-type lectin domain profile. 45 166 IPR001480 -
Pral4042g00003 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Pral4042g00003 850 Gene3D Phosphorylase Kinase; domain 1 498 610 - -
Pral4042g00003 850 SMART serkin_6 535 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00003 850 Gene3D Hepatocyte Growth Factor 360 443 - -
Pral4042g00003 850 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 34 796 - -
Pral4042g00003 850 Pfam Protein tyrosine and serine/threonine kinase 538 735 IPR001245 GO:0004672|GO:0006468
Pral4042g00003 850 SMART blect_4 51 172 IPR001480 -
Pral4042g00003 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 360 443 - -
Pral4042g00003 850 CDD PAN_AP_plant 360 444 - -
Pral4042g00003 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 41 169 - -
Pral4042g00003 850 SMART ntp_6 364 443 IPR003609 -
Pral4042g00003 850 ProSiteProfiles EGF-like domain profile. 306 342 IPR000742 -
Pral4042g00003 850 PIRSF SRK 17 850 IPR024171 GO:0004674
Pral4042g00003 850 ProSiteProfiles PAN/Apple domain profile. 361 445 IPR003609 -
Pral4042g00003 850 Gene3D - 40 169 IPR036426 -
Pral4042g00003 850 MobiDBLite consensus disorder prediction 830 850 - -
Pral4042g00003 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 611 813 - -
Pral4042g00003 850 Pfam S-locus glycoprotein domain 231 340 IPR000858 GO:0048544
Pral4042g00003 850 Gene3D Transferase(Phosphotransferase) domain 1 611 810 - -
Pral4042g00003 850 CDD STKc_IRAK 541 805 - -
Pral4042g00003 850 Pfam PAN-like domain 361 429 IPR003609 -
Pral4042g00003 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 499 610 - -
Pral4042g00003 850 ProSiteProfiles Protein kinase domain profile. 535 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4042g00003 850 SUPERFAMILY Protein kinase-like (PK-like) 521 818 IPR011009 -
Pral4042g00003 850 CDD B_lectin 52 172 IPR001480 -
Pral4042g00003 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 203 IPR036426 -
Pral4042g00003 850 Pfam D-mannose binding lectin 93 198 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4042g00003 Pral-Chr4042 9830 14324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4042g00003 449 835 Receptor kinase-like Gene Family AT4G23190 48.010 2.43e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4042g00003 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4042g00003 - - pcin:129322539 1050.43