Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4041g00003 ATGGTGGTAGAAATGATTTCAAAACGGAAAGAGAACAATTTTTCTGACTTCAAAAGCGCCAAGTCAACCTGTATACTTCTGGCGGGCTGCCCCTTGAACATGTGCCTCATCAGGATCAGGGGTATACTTATTTATTCTAGTGTAGACCAATTCATTACATCCATGGCTATCCTTCCTTATTGGCTTGTTCTTCCCAATCTGCTTTTGTTCTTCTCCAGATTTTCTTTTGCAACTGATACCCTCACCCAGTTCGAGTCTCTTCCTGACGGCCAGACCTTGGTTTCTGAAAATGAAATCTTCGAATTGGGTTTCTTCAGCCCTGGAAGTTCCACCGACCGCTATGTTGGAATCTGGTACCACGAGATCCCAGGTACAACTGTTGTCTGGGTTGCCAACCGTGGCAGACCCATCAAAAACAACTCTGGCATGTTGAGCATAAACACAGAGGGACGTCTTGTGCTGCTCGGCCAGAATGAGACAGTTGTTTGGTCAGCAAATTCCACCACAAAGGCCTGGAGTCCAATTTTGCAGCTTTTAGGCTCTGGAAACTTGGTTCTAAGAGATGGGAAAGATCAAAAGCCCCAAACCTACTTGTGGCAAAGCTTCGACTATCCTTCTGATACAATCTTGCCAGGAATGAAGTTTGGATGGGACCTGAGAACTGGTCTTAATCGACGTTTTACAGCATGGAAGAATTGGGATGACCCTTCTTTTGGAGACTTTACAGCAGAGCTTGTACTACACAACTATCCTGATTTAGTAAACCGGCAGGGCCCAACAGAGTATATGAGGAGTGGCCCCTGGAATGGTGTCCGGTTCAGTGGCATCTCCTATGCGACAAGCAATCCGCTTTATGAAGCAACGTTTGTCTGGAACAAAGATGAGGTTTATTCAATGCATACTCTCAAAAATAAGTCATTGATCACAAGATTTGTCTACAACCAAACATTATACTCACTACTGGACGTAATATGGAGTGAAGATGATCAGAGGTGGATTACATTTAGTTTTGCGCCAATTGATAATTGCGACAGATATAATCGTTGCGGCCCAAATGGAAACTGCGTCCTGGGTGAGACACCAATATGCCAGTGCTTGACAGGATTCTTGCCAAAATCACCCAAAAATTGGAATGCAATGGACTGGTCTCAAGGATGCATCCGCAATGAATCATGGAGTTGCAAGGAAAAAAACAGGGATTATTTTGTCAAATTTAGTGGGCTCAAATTCCCAGATACTACATATTCTTGGGTTAATGCAAGTATGACGCTTGAGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTAATGCTTATGCTAATTTAGATATCAGGGGAGGAGGTAGCGGTTGTGCTATGTGGTTCGGTGATTTAATTGATATAAGGCAGATTCCCTTTGATGACCAAAATTTGTATATTCGCCTTGCTTCTCCAGAAACAGCTGAACAGGATGAGGCTAATGGAAATAAGACAAAGGTGATTGCTGTAACAGTGCCCACTATATTGGCTGTGGTGATGCTTTTCACTTTGTTATACATTTACAAGCGCAGAAGAAACTCTAAAGCAGCAACCAAGGAAGAAGGCTCTGACAGAAACATGGAGCTAAAAAACTTGCTAGCAGTAGACAAAGAAGAAGGCCGTGAAGGAAATATGGAGCAACGTATCTATGACCTTGCATTAATAGCTAATGCTACCAATAACTTCTCATCGGACAACAAGCTTGGCCAAGGTGGTTTTGGTCCTGTATACAGGGGTATACTTGCGGACGGACAAGAAATTGCAGTGAAACGGCTTTCACGAAGTTCTTGCCAAGGGCTGTGTGAGTTTAAGAACGAAGTTAAATTGTGTGCCAAACTCCAGCACCGTAATCTTGTCAAGGTTCTTGGTTGTTGCATTCAAGGAGAGGAGATAATGCTCATATATGAATACATGCCCAACAAGAGCTTAGATTCATTTATTTTTGGTTCTGAAACTAAGCTTCTTGATTGGTCCAAGCGCTTTCACATTGTCCGTGGAATTGCTCGAGGCCTTATGTATCTTCATCAAGATTCTAGACTAAGAATCATCCATAGAGACCTTAAAGCAAGTAATATATTATTAGATAGTGAATTAAATCCAAAAATCTCAGATTTCGGTCTAGCAAGAATATTTGGAGGGGATCAAATTGAAGATAACACCAAACAAATTGTTGGTACATATGGTTATATGGCTCCTGAATATGCAATTCATGGACTCTTCTCAATCAAATCTGATGTATTCAGCTTCGGGGTGTTATTGTTAGAAATAGCATGGAGGTTGTGGAATGAGGGAATCCCACTAAAATTCGCTGATGGACGTTTGGGGAAGTCTTGTGTTGAATCAGAAGTCGTGCGATGCATCCACATCGGTCTTCTTTGTTTGCAGTACCATGCTGATGATAGGCCAGACATGCCATCTGTAGTTATAATGTTGAGTAGTGAGGGTGTCTTGCCTAAGCCTAAAGAACCTGGTTTCCTTTTAGAAAACATTGCAGTTAAGGGAGAATCTTCTAACAATCATACCACTCCGTCAAGTAATGAAACATCTATCACCTTGTTAGAAGCCAGGTAG 2592 0.4213 MVVEMISKRKENNFSDFKSAKSTCILLAGCPLNMCLIRIRGILIYSSVDQFITSMAILPYWLVLPNLLLFFSRFSFATDTLTQFESLPDGQTLVSENEIFELGFFSPGSSTDRYVGIWYHEIPGTTVVWVANRGRPIKNNSGMLSINTEGRLVLLGQNETVVWSANSTTKAWSPILQLLGSGNLVLRDGKDQKPQTYLWQSFDYPSDTILPGMKFGWDLRTGLNRRFTAWKNWDDPSFGDFTAELVLHNYPDLVNRQGPTEYMRSGPWNGVRFSGISYATSNPLYEATFVWNKDEVYSMHTLKNKSLITRFVYNQTLYSLLDVIWSEDDQRWITFSFAPIDNCDRYNRCGPNGNCVLGETPICQCLTGFLPKSPKNWNAMDWSQGCIRNESWSCKEKNRDYFVKFSGLKFPDTTYSWVNASMTLEECKAKCWENCSCNAYANLDIRGGGSGCAMWFGDLIDIRQIPFDDQNLYIRLASPETAEQDEANGNKTKVIAVTVPTILAVVMLFTLLYIYKRRRNSKAATKEEGSDRNMELKNLLAVDKEEGREGNMEQRIYDLALIANATNNFSSDNKLGQGGFGPVYRGILADGQEIAVKRLSRSSCQGLCEFKNEVKLCAKLQHRNLVKVLGCCIQGEEIMLIYEYMPNKSLDSFIFGSETKLLDWSKRFHIVRGIARGLMYLHQDSRLRIIHRDLKASNILLDSELNPKISDFGLARIFGGDQIEDNTKQIVGTYGYMAPEYAIHGLFSIKSDVFSFGVLLLEIAWRLWNEGIPLKFADGRLGKSCVESEVVRCIHIGLLCLQYHADDRPDMPSVVIMLSSEGVLPKPKEPGFLLENIAVKGESSNNHTTPSSNETSITLLEAR 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4041g00003 863 PIRSF SRK 50 863 IPR024171 GO:0004674
Pral4041g00003 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672|GO:0006468
Pral4041g00003 863 SMART blect_4 84 205 IPR001480 -
Pral4041g00003 863 Pfam D-mannose binding lectin 126 231 IPR001480 -
Pral4041g00003 863 CDD PAN_AP_plant 393 477 - -
Pral4041g00003 863 ProSiteProfiles Protein kinase domain profile. 569 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4041g00003 863 Gene3D Phosphorylase Kinase; domain 1 532 644 - -
Pral4041g00003 863 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 393 476 - -
Pral4041g00003 863 SUPERFAMILY Protein kinase-like (PK-like) 555 831 IPR011009 -
Pral4041g00003 863 ProSiteProfiles PAN/Apple domain profile. 394 478 IPR003609 -
Pral4041g00003 863 ProSiteProfiles EGF-like domain profile. 339 375 IPR000742 -
Pral4041g00003 863 SMART ntp_6 397 476 IPR003609 -
Pral4041g00003 863 ProSiteProfiles Bulb-type lectin domain profile. 78 199 IPR001480 -
Pral4041g00003 863 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 645 764 - -
Pral4041g00003 863 CDD B_lectin 85 205 IPR001480 -
Pral4041g00003 863 CDD STKc_IRAK 575 818 - -
Pral4041g00003 863 Gene3D - 73 202 IPR036426 -
Pral4041g00003 863 Pfam PAN-like domain 394 462 IPR003609 -
Pral4041g00003 863 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 67 809 - -
Pral4041g00003 863 Gene3D Transferase(Phosphotransferase) domain 1 645 823 - -
Pral4041g00003 863 Pfam Protein tyrosine and serine/threonine kinase 572 764 IPR001245 GO:0004672|GO:0006468
Pral4041g00003 863 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 74 202 - -
Pral4041g00003 863 Gene3D Hepatocyte Growth Factor 393 476 - -
Pral4041g00003 863 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 533 644 - -
Pral4041g00003 863 Pfam S-locus glycoprotein domain 264 373 IPR000858 GO:0048544
Pral4041g00003 863 SUPERFAMILY alpha-D-mannose-specific plant lectins 127 236 IPR036426 -
Pral4041g00003 863 MobiDBLite consensus disorder prediction 843 863 - -
Pral4041g00003 863 SMART serkin_6 569 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4041g00003 Pral-Chr4041 18042 34922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4041g00003 477 863 Receptor kinase-like Gene Family AT4G05200 45.863 1.43e-115 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4041g00003 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4041g00003 - - pcin:129322539 1058.51