Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4040g00003 ATGTATAATAGTGGTTATATGGCTCCTGAATATGCCATTCATGGGCAATTCTCCGTCAAATCCGATGTGTTCAGTTTTGGAGTATTGTTGTTAGAAATAGTGAGCGGCATGAAAAACAGGGGGCCCGTTTTGCCAAGTCAAAGCGTTAATCTTATCGGACATGCATGGAGGTTGTGGAAGCAGGGAATCCCACTAAATTTTGCCGATGAATGTTTGGAGAAGTCTTGCGTTAAATTAGAAGTATTGCGATGCATCCACATCGGTCTTCTTTGTTTGCAATGCCATGCTGATGACAGGCCAAACATGTCATCTGTGGTTATCATGTTGAGTAGTGAGGGTGTCTTGCCTGAGCCCAAAGAACCTGGTTTTCTCTTAGAACACGTTCCAGTTAGGGAAGCATCTCCTAACAATCATACAGCTCTTTCAAATAATGAAGTATCTCTCACTTTGTTAGAAGCGAGGTGA 465 0.4258 MYNSGYMAPEYAIHGQFSVKSDVFSFGVLLLEIVSGMKNRGPVLPSQSVNLIGHAWRLWKQGIPLNFADECLEKSCVKLEVLRCIHIGLLCLQCHADDRPNMSSVVIMLSSEGVLPEPKEPGFLLEHVPVREASPNNHTALSNNEVSLTLLEAR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4040g00003 154 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 152 - -
Pral4040g00003 154 SUPERFAMILY Protein kinase-like (PK-like) 4 115 IPR011009 -
Pral4040g00003 154 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Pral4040g00003 154 Pfam Domain of unknown function (DUF3403) 110 154 IPR021820 GO:0004674
Pral4040g00003 154 Pfam Protein tyrosine and serine/threonine kinase 6 71 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4040g00003 Pral-Chr4040 50134 50855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4040g00003 5 154 Receptor kinase-like Gene Family AT4G23150 44.586 2.58e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4040g00003 PK_Tyr_Ser-Thr 1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4040g00003 - - qsa:O6P43_000899 194.126