Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4039g00005 ATGGCCATCCTTCCTTCTATGCTTGTTCTTGCCAATATGCTTCTATCAATCTCTGTATTGGTCTCTGCAACTGACATCATTACACGTTCTCAGCCACTTCCTGATGATGGAACAACCACTTTGACGTCTAAAGACGGAATCTTTGAATTGGGTTTCTTCAGTCCAGGTAGTTCCACAAACCGTTATGTTGGAATTTGGTTCAAAAGAATCCGTCGTAGAACTATTGTTTGGGTAGCCAATCGAGAAAAACCAATCAGAGACAATTCAGGAATGTTGAGCTTAAACACACAGGGAAACCTTGTGCTTCTTAGCCAAAATGAAAATATTATTTGGTTGGCAAATTCAACAAGAAAGGCCTTGAGTCCAATTGTACAGCTTTTAGACTCAGGAAACTTAGTAATAAGAAATGAGAAAGACCAGAGTGCCCAAAACTACTTGTGGCAAAGCTTTGACTATCCTTCTGATACTCTTTTACCAGGAATGAAGTTAGGTTGGGATGTGAAAACTGGTCTTAATCGACGTTTCACTGCATGGAAGAGTTGGGATGACCCCTCACTTGGAGATTTCACAGCAGAGCTTGTAGTTCACAATTATCCTGAAATAGTTTATTGGTGGGGTCAAAAAGAGTATTTTAGAATTGGCCCTTGGAATGGTCTTGGATTTAGTGGTGCCCCTAGAACGAAGAAAAATTGGATTGATGATTTGAAGTTTGTCTCTAACAAGGATGAGGTGTATTTCACATATGCTCCTAGAAATGATTCACTGATTTTAAGGCGGGTCTTGAACCAGACGACATATTCAGTTGAGACCTATATATGGATTGAAAATGAAAAAAGTTGGAGCACTTTCGTTTATCTGCCAATGGATAGCTGTGATAGATATAATCGTTGTGGTCCATACGGAAATTGCATCATTGATGAGACGCCAGTCTGTCAGTGCTTGAAAGGGTTCAAGCCAAAATCACCAAGAAATTGGGAAGTAATGGATTGGACCCAAGGATGTATTCGTAGTGAATCATGGAGTTGTAAGGTTAAAAAAAGAGACAATTTTCTCAAATTTAGTGGGTTGAAATTGCCAGACACAACACATTCTTGGGTTAACGCAAGTATGACACTTGAAGAGTGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTACAGCTTATGCTAATTCCGATATCAGCGGAGGAGGTAGTGGGTGTGCCATCTGGTTTGGAGATCTAATTGACATGAAACGTATTTCGGATCCTGATCAAGTTATTTATATTCGCCTTGCTGCTCCAGAAACAGCTGAACAGGAAGATGTAGACAGAAACAAGATCATGGTGATTGTTATGACAAGTACTATTTTAATGGCTGTGGTGTTTTCTTTTGCTTCCTTCTATATTTACAACAGCAGAACCAAGTTTAAAGGAAATCATGTTGATGGCCCTGAAGGAGACATAGAGCTTCCTTTCTTTGACTTTGCTGTAATAGTTAGTGTTACTAATAACTTCTCCATTGACAACAAGCTTGGCCAAGGTGGTTTTGGACCTGTGTACAAGGGTATCTTGCCTAATGGGCAAGAGATTGCTGTCAAGCGACTTTCACAGAGTTCTAATCAAGGAATTAAAGAATTTCAGAATGAAGTTTTATTGTGTGCCAAACTTCAACACCGAAATCTCGTTAAGGTTCTTGGTTGTTATATCCAAGGAGGAGAGAAAATGCTCATATATGAATACATGCCCAATAAGAGCTTAGATTCATTAATTTTTGGTTCTATTACTCAAAGTAAACTATTAGATTGGTCCAAGCGCTTTCATATTATATGTGGAATTGCTCGTGGGCCTATGTATCTTCATCAAGATTCCAGATTGAAGATTATTCATTGGGATATTAAAGCTAGTAATATATTATTAGACAATGAATTGAATCCAAAAATATCGGATTTTGGCTTAGCAAGAATCTTTGGAGGAGATCAAGTTGAAGAGAATACAAATAGAGTGATTGGAACATATGGTTATATGGCACCCGAATATGCTATTGATGGTTTATTCTCTACCAAATCTGACGTATTTAGTTTTGGAATATTACTATTGGAAATAGTGAGTGGAATGAAAAATAGAGGGCTCTCCCACCCAAACCAGAGTCTTAATCTCATTGGACATGCATGGTGGTTGTGGAAAGATGGCATCCCACTAAAGTTGATTGATGCAAATTTGAGGGAATTTTGTATTGCATCAGAAGTATTGCGATGCATCCATATTGGCCTTCTTTGTGTACAACATCATCCTGGAGATAGGCCAGATATGGCTTCTGTGGTTGTGATGTTGAGTAGTGAAGTCACCTTGCCTCAACCTAAAGAACCTGAATTCCTTTTAAACAAGACTTCAATTATGGGAGAAAGTTCAACTATTGTGACTTCTTCAATCAATGAAACATCCCTTACTGAGTTAGAGTTACAAGTTCGCTGCCTGACATGTCTAAACTATGATTTTTCAAGGATCAAACGTGCGACCAAGTCACCAATCATCGTGCTTCTTCTTCCGACTTTGCTTGATCATGCGTGCAGCTCCAACATAATATTATTTCTAATAATGGCAATCCTTCATTATTGTTTGCTACTTCTATTTTTCAGTAAGCTTTTATTCTTCTCGCCATCATTATTGGCCACGGCAACCACCGATACTATTACGCAGTCTCAGCCTCTGGTTGATGATGGAAAATCCACCTTGGTATCTAAAGATGGAAGATTTGAACTGGGATTTTTCAGCCCAGGTAGTTCCACAAACCGCTACGTTGGACTCTGGTACAAGAATGTTCCAGTTAGATATATCCTTTGGGTTGCCAACCGCGAAAAACCAGCCAAAGACAGGCTTGGCATGATGAGCATAAACAAAGAGGGACATCTTGTTGTTCTCAGCCAAAATAAGACTCTTCTTTGGGTTGCAAACTCGACGACGACAACAAAGGCGTTGATGAGTCCTATTGTTCAGCTTTTAGACTCTGGAAACTTGGTACTAAGAGACGACAAAGACCAGAATCCACAAAACTACTTGTGGCAAAGCTTCGACCATTACTCTAACGTATTTTTACCAGGAATGAAGCTTGGATGGGACTTGAGAACCGGTCTGAACCGGCGTTTAGTAGCATGGAAGAATTGGGATGACCCTTCTCCAGGAGATTTCACATGTGAGCTCATGCTTCACAGTTATCCAGAAATATATACTTGGCAAGGTCGGACAAAATATTACAGGAGTGGCCCTTGGAATGGTGATCATTTTGTTGATACTCCTTCATCAAATAAGATGTTGCTTTATAATGCAACGCTTGTGTCTAACAAGGATGAGGTGTACTACATGTATGTTCCCTTAAATGAGTCAATGGTCTCTATCAGAGTCTTGAACCAGACAAGAAACTCTCTGCAAAATCTCATGTGGGTTGAAGAGGATCAAACTTGGAAGTCTTTTGGCGATGTTCCAAGAGACAATTGTGGAAGATATAATCTTTGTGGTGCTTTTGGAATTTGTGCCATTGTTGACTCAACCTTATGCCAATGCTTGAAAGGATTTGAGCCAAAATCACCTAAGAATTGGGACATGTATGACTGGACAGGAGGGTGTGTTCGCAGTAAACCTTGGAGTTGTAAAGTTAAAGGCAAAGACAATTTTGTTAAATATAGTAACCTTAAATTACCAGATACTACATATACTTGGGTCAATGCAAGTATGACACTTGACGAGTGCAAAGCCAAATGTTGGGAAAATTGTTCTTGTACTGCTTATTCTTTTTCAGATATTAGGGGAGGAGGAAGTGGCTGTGTCATGTGGTTTGGTGATCTACTTGATTTGAATCAAATGTCAAATGATGCTGGCCAAGATCTATATATTCGCCTTGCTTCTACAGATATAGCCAAACATGAAGGTTCTAATTCATACAAGATTAAAGTAGCTGCGATAACGGCTACTGTTTTTGCACTTTGGATGCTTTTGACCTCCCTCTATATTTATAAGAGCAGAAGAAAATCCAAAGAAAATACTGATGAAGTCCCAGAAGGAGATATGGACCTTCCTCTCTATGACTTTGCTATAATAGCTAGTGCTACCCAGAACTTCTCAGATGAAAATAAGCTTGGCCAAGGTGGTTTTGGACCCGTATATAAGGGAACATTAGGTGGGGGACAAGAGATTGCTGTGAAGCGACTTTCACAAAATTCTCACCAGGGAATGAGGGAATTCAAGAATGAAGTTATGTTGTGTGCCAAACTTCAGCATCGAAATCTTGCTAAAGTTCTTGGTTGCTGCATTGGAGGAGAGGAGAAAATGCTCATTTACGAGTACATGTCAAACAAGAGTTTAGATTCATTTATTTTTGGTTCGAAACTCTTATGTTGGTTCAAGCGCTTCAACATTATATGTGGAATTGCCCGAGGACTTACGTATCTTCATCAAGATTCAAGATTAAGAATCATTCATAGAGATCTCAAAGCAAGTAATATATTACTAGACAATGATTTGAATCCGAAAATATCAGATTTTGGCTTGGCAAAAACATTTGGAAAAGATGAAAATGTAGAAAATACAAGGAGAGTTATCGGTACATATGGTTATATGGCACCTGAATATGCAATTTATGGGTCATTCTCCATGAAATCTGACGTCTTCAGCTTTGGAATTTTATTGCTCGAGATAGTAAGTGGAAAGAAAAATGGAGCATTCTCCTTGGCAAACAAGAATGTCAACCTTATTGGGCTTGCATGGAGGTTGTGGAAGGAGGGAATCCCACTTGAATTGATTGATCCACATATGGAAGAACCTTATAATGAATCAGAAGTATTGAGATGCATCCATATCGGTCTTCTTTGTGTGCAAAATCATCCTGATGATAGACCAAACATGGCGTCTGTGGTTGTAATGTTAAGCAGTGAGGGAGATTTGCCTCAACCTAAAGAACCTGGTTTCCTTTTAGAAACATTTCCATACAAAAAACATGGCAATCATGATTCAGCATCAATAAATGAAATTTCTATCACCCAGTTAGTACCCAGATAA 5028 0.39 MAILPSMLVLANMLLSISVLVSATDIITRSQPLPDDGTTTLTSKDGIFELGFFSPGSSTNRYVGIWFKRIRRRTIVWVANREKPIRDNSGMLSLNTQGNLVLLSQNENIIWLANSTRKALSPIVQLLDSGNLVIRNEKDQSAQNYLWQSFDYPSDTLLPGMKLGWDVKTGLNRRFTAWKSWDDPSLGDFTAELVVHNYPEIVYWWGQKEYFRIGPWNGLGFSGAPRTKKNWIDDLKFVSNKDEVYFTYAPRNDSLILRRVLNQTTYSVETYIWIENEKSWSTFVYLPMDSCDRYNRCGPYGNCIIDETPVCQCLKGFKPKSPRNWEVMDWTQGCIRSESWSCKVKKRDNFLKFSGLKLPDTTHSWVNASMTLEECKAKCWENCSCTAYANSDISGGGSGCAIWFGDLIDMKRISDPDQVIYIRLAAPETAEQEDVDRNKIMVIVMTSTILMAVVFSFASFYIYNSRTKFKGNHVDGPEGDIELPFFDFAVIVSVTNNFSIDNKLGQGGFGPVYKGILPNGQEIAVKRLSQSSNQGIKEFQNEVLLCAKLQHRNLVKVLGCYIQGGEKMLIYEYMPNKSLDSLIFGSITQSKLLDWSKRFHIICGIARGPMYLHQDSRLKIIHWDIKASNILLDNELNPKISDFGLARIFGGDQVEENTNRVIGTYGYMAPEYAIDGLFSTKSDVFSFGILLLEIVSGMKNRGLSHPNQSLNLIGHAWWLWKDGIPLKLIDANLREFCIASEVLRCIHIGLLCVQHHPGDRPDMASVVVMLSSEVTLPQPKEPEFLLNKTSIMGESSTIVTSSINETSLTELELQVRCLTCLNYDFSRIKRATKSPIIVLLLPTLLDHACSSNIILFLIMAILHYCLLLLFFSKLLFFSPSLLATATTDTITQSQPLVDDGKSTLVSKDGRFELGFFSPGSSTNRYVGLWYKNVPVRYILWVANREKPAKDRLGMMSINKEGHLVVLSQNKTLLWVANSTTTTKALMSPIVQLLDSGNLVLRDDKDQNPQNYLWQSFDHYSNVFLPGMKLGWDLRTGLNRRLVAWKNWDDPSPGDFTCELMLHSYPEIYTWQGRTKYYRSGPWNGDHFVDTPSSNKMLLYNATLVSNKDEVYYMYVPLNESMVSIRVLNQTRNSLQNLMWVEEDQTWKSFGDVPRDNCGRYNLCGAFGICAIVDSTLCQCLKGFEPKSPKNWDMYDWTGGCVRSKPWSCKVKGKDNFVKYSNLKLPDTTYTWVNASMTLDECKAKCWENCSCTAYSFSDIRGGGSGCVMWFGDLLDLNQMSNDAGQDLYIRLASTDIAKHEGSNSYKIKVAAITATVFALWMLLTSLYIYKSRRKSKENTDEVPEGDMDLPLYDFAIIASATQNFSDENKLGQGGFGPVYKGTLGGGQEIAVKRLSQNSHQGMREFKNEVMLCAKLQHRNLAKVLGCCIGGEEKMLIYEYMSNKSLDSFIFGSKLLCWFKRFNIICGIARGLTYLHQDSRLRIIHRDLKASNILLDNDLNPKISDFGLAKTFGKDENVENTRRVIGTYGYMAPEYAIYGSFSMKSDVFSFGILLLEIVSGKKNGAFSLANKNVNLIGLAWRLWKEGIPLELIDPHMEEPYNESEVLRCIHIGLLCVQNHPDDRPNMASVVVMLSSEGDLPQPKEPGFLLETFPYKKHGNHDSASINEISITQLVPR 1675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4039g00005 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1440 1640 - -
Pral4039g00005 1675 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Pral4039g00005 1675 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Pral4039g00005 1675 Pfam Protein tyrosine and serine/threonine kinase 499 713 IPR001245 GO:0004672|GO:0006468
Pral4039g00005 1675 Pfam Protein tyrosine and serine/threonine kinase 1367 1630 IPR001245 GO:0004672|GO:0006468
Pral4039g00005 1675 CDD STKc_IRAK 504 770 - -
Pral4039g00005 1675 Pfam S-locus glycoprotein domain 1077 1187 IPR000858 GO:0048544
Pral4039g00005 1675 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Pral4039g00005 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 341 424 - -
Pral4039g00005 1675 CDD B_lectin 40 153 IPR001480 -
Pral4039g00005 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1329 1439 - -
Pral4039g00005 1675 SUPERFAMILY alpha-D-mannose-specific plant lectins 938 1050 IPR036426 -
Pral4039g00005 1675 Pfam D-mannose binding lectin 74 179 IPR001480 -
Pral4039g00005 1675 Pfam D-mannose binding lectin 938 1045 IPR001480 -
Pral4039g00005 1675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1482 1494 IPR008271 GO:0004672|GO:0006468
Pral4039g00005 1675 ProSiteProfiles Protein kinase domain profile. 1364 1646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4039g00005 1675 CDD PAN_AP_plant 341 425 - -
Pral4039g00005 1675 FunFam Os04g0303100 protein 928 1076 - -
Pral4039g00005 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 883 1016 - -
Pral4039g00005 1675 SMART ntp_6 1211 1291 IPR003609 -
Pral4039g00005 1675 SMART ntp_6 345 424 IPR003609 -
Pral4039g00005 1675 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4039g00005 1675 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Pral4039g00005 1675 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 761 - -
Pral4039g00005 1675 Gene3D Hepatocyte Growth Factor 341 426 - -
Pral4039g00005 1675 Gene3D Hepatocyte Growth Factor 1207 1294 - -
Pral4039g00005 1675 SMART blect_4 887 1019 IPR001480 -
Pral4039g00005 1675 SMART blect_4 32 153 IPR001480 -
Pral4039g00005 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 150 - -
Pral4039g00005 1675 Pfam PAN-like domain 342 410 IPR003609 -
Pral4039g00005 1675 Pfam PAN-like domain 1208 1276 IPR003609 -
Pral4039g00005 1675 Gene3D - 18 150 IPR036426 -
Pral4039g00005 1675 Gene3D - 882 1017 IPR036426 -
Pral4039g00005 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 778 - -
Pral4039g00005 1675 Gene3D Transferase(Phosphotransferase) domain 1 574 781 - -
Pral4039g00005 1675 Gene3D Transferase(Phosphotransferase) domain 1 1440 1639 - -
Pral4039g00005 1675 ProSiteProfiles PAN/Apple domain profile. 1208 1292 IPR003609 -
Pral4039g00005 1675 CDD B_lectin 900 1018 IPR001480 -
Pral4039g00005 1675 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 573 - -
Pral4039g00005 1675 SMART serkin_6 1364 1632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4039g00005 1675 SMART serkin_6 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4039g00005 1675 CDD PAN_AP_plant 1207 1292 - -
Pral4039g00005 1675 SUPERFAMILY Protein kinase-like (PK-like) 1347 1635 IPR011009 -
Pral4039g00005 1675 Gene3D Phosphorylase Kinase; domain 1 1325 1439 - -
Pral4039g00005 1675 Gene3D Phosphorylase Kinase; domain 1 470 573 - -
Pral4039g00005 1675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Pral4039g00005 1675 ProSiteProfiles Bulb-type lectin domain profile. 887 1013 IPR001480 -
Pral4039g00005 1675 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 184 IPR036426 -
Pral4039g00005 1675 FunFam Os04g0303100 protein 65 210 - -
Pral4039g00005 1675 CDD STKc_IRAK 1370 1632 - -
Pral4039g00005 1675 SUPERFAMILY Protein kinase-like (PK-like) 481 782 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4039g00005 Pral-Chr4039 12198 25453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4039g00005 438 784 Receptor kinase-like Gene Family AT4G23230 54.131 7.61e-120 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4039g00005 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4039g00005 - - tpra:123915292 1824.68