Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4039g00003 ATGGCCATTCTTCATTATGTGCTTGCTCTTACAAATCTCTTTATATTCTGTACCCGATTTTCATATGCAACTGACACTCTTGCCCAGTTTCAGTCGCTTCCTTATGGTAGGACCTTGGTTTCCAGAGATGGAAGCTTTGAACTAGGTTTCTTTAGCCCAGGTAGCTCGAGAAATCGTTATCTTGGAATTTGGTACAAGAAGATCCCAGTTAGAACTGTTGTCTGGGTTGCCAACCGTGACAAACCAATCAAAGACAACTCTAGCATGCTGAGCATAAACATAGAGGGACATCTTGCCATTCTCAGCCAGAATCATACTGTTGTTTGGTTGGCAAATTCAAGAACAAAGGCCTCAAGTCCAATTGTACAACTTTTAGGCTCCGGAAACCTGGTACTAAGAGATGAGGAAGACCAGAATCCTCAGAACTATTTGTGGCAGAGCTTTGACTATCCTTCTGACACCTTTTTGCCAGGAATGAAGTTTGGATGGGACTTGAGAACTGGTCTTAATCGACGAATAATAGCATGGAAGAGCTCAGATGACCCATCTCCAGGAGACTTCATATGGGAGCTCGTAAATCATAATAACCCTGAGGGAATTATATGGAAGGGCCAAACAAAGTATTACCGGAGTGGTCCTTGGAATGGTCTTCGCTTTAGTGGGGCTCCTGAGCTGAGGAACAATATGGTTTTCGATTTCAGATTTGTATCCACCAAGGATGAGGTATATTACATGTACAATCTAAGGCATGAGTCAGTAATTTCAAGAATTGTTATGAATCAAACAATATATGTTCGTCAGCGTCTCACATGGATTGAAGAAGCTAAAAGTTGGAGGCCTTTTTCTTCTGTGCCAAGAGATGATTGTGATCAGTATAATCTTTGTGGTCCATTTGGAAATTGCGTCATGGGTGAGTCACCAGTATGCCAATGCTTGAAAGGATTCAAGCCAAAATCATCCCGGAACTGGGATGCAATGGATTGGACTCAAGGATGTATCCACAGTGAACCATGGATCTGCAAGGTAAAAAACAGAGATAATTTCCTTAAATTCGGTGGGATTAAATTGCCAGATACCACAAATTCTTGGGTTGATGGAACTATGACACTTGAGGAGTGCAAAGCCAAATGCTTGGAAAATTGTTCCTGTACTGCTTATGGTAACTCAGATATCAGCAGAGGGGGTAGCGGTTGCATCATCTGGTTTGGTGATCTAAATGATATAAGACAGGTTTCAGGTGCTGGGCAAGATCTATATATTCGGTCTGCTGTTCCTGAAACAGCTGACCGTGAAGATGCAGATGGAAAGAAGATAAGGGTGATTGTGATACCAGTTGCCATTTTCTTGGCTCTTGTGATGTTTTTCACTTTATTTTTCATTTGTAAGAACCACAGAAAGTCTGAAGTGGAAACACAGAAAACTTTGCCAACAGAAGATAATGATGAAGGCGCAGAAGACGACATGGAACTTCCTTTCTATGACCTGTCTGTAGTAGCCAGTGCTACTAATGACTTCTCAACTGACAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTATATAAGGGTATACTGGCAAATGGACAAGAGATTGCTGTCAAGCGGCTTTCACAAAGATCCGGACAAGGATTGAAAGAATTTAAGAACGAAGTTGTTTTGTGTGCAAAACTTCAGCATCGAAATCTTGTTAAAGTTCTTGGTTGTTGCATTCAAGGGGAAGAGAAGATGCTCATATATGAATACATGCCCAATAAGAGCTTAGATTCATTCATTTTTCGTTCTACTGCTCAAAGTGAATTGCTAGATTGGCCCAAGCGCTATAACATTATATGTGGAATAGCTCGGGGGATTCTTTATCTTCATCAGGATTCTAGATTAAGAATTATCCACAGGGATCTCAAAGCAAGTAATGTATTATTGGACAATGAGTTAACTCCAAAAATTTCTGATTTCGGCATGGCAAGAATATTTGGAGGAGATCAAGTCGAAGGAAATACAAGGAGAGTGGCTGGCACATAG 2016 0.4107 MAILHYVLALTNLFIFCTRFSYATDTLAQFQSLPYGRTLVSRDGSFELGFFSPGSSRNRYLGIWYKKIPVRTVVWVANRDKPIKDNSSMLSINIEGHLAILSQNHTVVWLANSRTKASSPIVQLLGSGNLVLRDEEDQNPQNYLWQSFDYPSDTFLPGMKFGWDLRTGLNRRIIAWKSSDDPSPGDFIWELVNHNNPEGIIWKGQTKYYRSGPWNGLRFSGAPELRNNMVFDFRFVSTKDEVYYMYNLRHESVISRIVMNQTIYVRQRLTWIEEAKSWRPFSSVPRDDCDQYNLCGPFGNCVMGESPVCQCLKGFKPKSSRNWDAMDWTQGCIHSEPWICKVKNRDNFLKFGGIKLPDTTNSWVDGTMTLEECKAKCLENCSCTAYGNSDISRGGSGCIIWFGDLNDIRQVSGAGQDLYIRSAVPETADREDADGKKIRVIVIPVAIFLALVMFFTLFFICKNHRKSEVETQKTLPTEDNDEGAEDDMELPFYDLSVVASATNDFSTDNKLGEGGFGPVYKGILANGQEIAVKRLSQRSGQGLKEFKNEVVLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDSFIFRSTAQSELLDWPKRYNIICGIARGILYLHQDSRLRIIHRDLKASNVLLDNELTPKISDFGMARIFGGDQVEGNTRRVAGT 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4039g00003 671 ProSiteProfiles Protein kinase domain profile. 505 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4039g00003 671 SUPERFAMILY Protein kinase-like (PK-like) 490 668 IPR011009 -
Pral4039g00003 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 470 580 - -
Pral4039g00003 671 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Pral4039g00003 671 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Pral4039g00003 671 CDD B_lectin 31 151 IPR001480 -
Pral4039g00003 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Pral4039g00003 671 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 661 - -
Pral4039g00003 671 SMART serkin_6 505 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4039g00003 671 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pral4039g00003 671 Gene3D Phosphorylase Kinase; domain 1 479 580 - -
Pral4039g00003 671 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Pral4039g00003 671 Gene3D - 19 148 IPR036426 -
Pral4039g00003 671 Pfam PAN-like domain 340 408 IPR003609 -
Pral4039g00003 671 Gene3D Transferase(Phosphotransferase) domain 1 581 671 - -
Pral4039g00003 671 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 581 671 - -
Pral4039g00003 671 Pfam D-mannose binding lectin 72 177 IPR001480 -
Pral4039g00003 671 Pfam Protein tyrosine and serine/threonine kinase 507 656 IPR001245 GO:0004672|GO:0006468
Pral4039g00003 671 SMART ntp_6 343 422 IPR003609 -
Pral4039g00003 671 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Pral4039g00003 671 SMART blect_4 30 151 IPR001480 -
Pral4039g00003 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Pral4039g00003 671 CDD PAN_AP_plant 343 423 - -
Pral4039g00003 671 Gene3D Hepatocyte Growth Factor 339 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4039g00003 Pral-Chr4039 6677 9691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4039g00003 425 671 Receptor kinase-like Gene Family AT4G23190 53.815 1.04e-82 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4039g00003 PK_Tyr_Ser-Thr 9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4039g00003 - - tcc:18593755 864.374