Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4038g00007 ATGATGGAGAGTTTCAGAGTGATGTATCTGTACTTCTTGCTGCTATGCTTTATAAAACCGCTCACTTCACAAGACAGCATCACTCCCGGAAACTTGATTAGAGAGGGCGAGACTTTAGTTTCCTCAAATGGGGATTTTGAATTTGGATTCTTCCGCCCTGGGTCTGCAAACGCCCGGTATTTAGGGATATGTTATAAGAAGTCTCCGTCTACAATCTTCTGGGTGGCCAACCGAGACAAACCTCTCAACAACGATAGGGGTAAGGGTGTCTTACGGTTAAATGATCGAGGAGTTCTCCTCCTTCTTGATGCCACAAACAACAACACCGTGTGGTACTCCAATCATTCATCAATCAGAGCATATAATACTTTTGCTCAACTCTTGGATTCGGGAAATCTCGTGGTGAAAAATGGATATGGTGGTGGTGACAGTGGTGACTTTGACCAACTCTTATGGCAGAGTTTTGACCACCCTTGTGACACCTTAATGCCGGGAATGAAGCTTGGGTGGGATGAAGAAACGGGTTTGGATAAATTTCTGTCATCTTGGAAAAGTTCAGATGATCCAGGTCAGGGAGACTACGTAATGAAACTAGACCGTAGAGGGTACCCACAAATCTTTCAACTGAGTGGTTCCAAGGTGATAGTTAGAGCAGGGTCATGGAATGGCGTCTCTTTCACGGGATATTCAAAACATAGTCCGGATCCAGTTGAAAAACTGGACTTTGTGTTGAATGAAAAAGAGGCATATTACAAGAGTAGTCTTATAAATAATTCAATTTTCTCTAGATATATAATGACCCCTTCAGGCATAGGGCAGCGTTTTGATTGGGTAATTCAAACAAGCAGCTGGCGGGTGATGAACACTGCTCTTCCTGACTCGTGTGACAATTATGCCTTATGTGGTGCAAATTCTATCTGCGACATCAATAGCAATCCTGTTTGCAAATGCCTGAGAGGGTATGAACCCAAGAATTTTAAGGAATGGAATGGGTCTGATTGGAACAGTGGCTGCACTAAAAGGGTTTCTTTGAATTGTGATGCTAGCGATGGATTTAAGCAGTATACAGGCGTTAAGCTGCCAGACACGTCATCTTCATGGTATAACATGACCATGGCCCTTGAGGAATGCAAGAGAACATGTCTGCAAAACTGTTCTTGTACAGCATATGCAAGTTTGGATGTTCGAGGTGAAGGAAGTGGCTGCTTGATATGGCTTGATCAACTAGTTGACATGAGACAATTTCTTGACGGTGGACAAGACCTCTATGTACGAGTTCCTGCTTCAGAGCTAGATCATTTTCGGGATGAAGGCCATGGAAGCATTGGCAAGAAGGAGATAGCGGCAATTGTGGTTGGCTGTGCAATATTCGTATCAAGTTTTATGATTTTTGGATTGACTTTAATTGCAAGGAAAAGGAGACTTCAAGATTCGGGTAAATGCTTAACTTTTCAAATGAATATGTTTTGTCACTGTTCTAAAACTCTGAATATTGTCATGATCAACAACAATCTAGTGGAGGAGGGCATGGATCTTCCAACATTTGATTTGTCAGTCATAATGAAGGCCACTGATAATTTTTCTACCGTTAACAAATTGGGTGAAGGTGGCTTTGGGCCTGTATACAAGGGTATTCTAGAAGATGGCCAAGAATTAGCTGTGAAAAGGTTGTCCACAAAATCTGATCAGGGGTTGGAAGAGTTGAAAAATGAAGTTCTATTGATAGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTGAAGGAGAAGAAAAGTTGCTGATTTACGAGTATATGCCAAACAAGAGCTTGGATCACTTTATTTTTGATGAAAGTTGTAGCAACTTGTTGGACTGGCTTAAGCGTTGGCATATCATTCATGGCATTGCTCGAGGACTTGTATATCTTCATATAGATTCCAGATTAAGAATTATTCATAGAGATTTTAAAACCAGCAATATTCTTCTAGATGCTTACATGAATCCAAAAATATCTGACTTTGGCCTTGCTCGCATATTTTGGGATGATCAAGTGGTCGCCAATACTAACAAAGTTGTTGGAACATATGGATATATGCCTCCTGAATATGCTGTGCGTGGACAATTTTCAATGAAATCAGATGTCTTTAGCTTTGGTGTAATAGTACTAGAAATTATTAGTGGAAAGAAGAATAGAGAGTTTTCTCACCCTTATCTCAATCTTCTTGGACATGCATGGAGACTGTGGATCCAAGGAAGACCATTGGAGCTACTGGATGAATGTTTAAAGGAAAGTTGTAGTCAATTTGAAGTCGTAAGATGTGTACAGGTAGGACTATTATGTGTGCAACAAAGAGCTGAAGATAGGCCAGATATGTCAACTGTAATTCTTATGTTAAATGGTGAGAAATTGTTGCCACAACCAAAAGTTCCTGGTTTTTACACTGCAAGTGATGTCCTCGTTGGTTCAAGTTCATTACACCAAATATTCACACAGTTCTCACAAAATGAAATTTCTCAAATGCTAGACGGAAGGGCTGGGCAGGGCATGCCCTCTGCCCTCTGCCCAGCCCGAAAAATGAGCGGGCTGCATTTTGCGGCCCGCTGCCCTGCCCTGCCCATAGAAGCCCTAACCATTTTCGGACTGGGTGGCTTTGGACCAGTATACAAGGGTATTCTACAAGATGGGCAAGAGCTAGCTGTAAAAAGGCTATCAACAAAATCTGGTCAAGGGCTAGAAGAGTTGAAAAATGAAGTCGTGTTAATAGCAAAACTTCAGCACCGTAATCTTGTGAAGCTTCTTGGTTGTTGCATTGAGGGGAAAGAGAAATTGTTGATTTATGAATATATGCCAAACAAGAGCTTAGACCACTTTATTTTTGATGAAGTTCGTAGCAAGTTGCTGGATTGGCTTAAGCGTTGGCATATTATTCATGGAATTGCTCGAGGACTTGTCTATCTTCATATAGATTCCAGATTAAGAATTATTCATAGAGACCTTAAAACTAGCAATATTTTGCTAGATACTTCTATGAATCCAAAAATATCTGACTTTGGCCTAGCTCGCACATTTTGGGATGATCAGGTTGAGGCCAACACTAACAAAATTGTTGGAACATAG 3111 0.4102 MMESFRVMYLYFLLLCFIKPLTSQDSITPGNLIREGETLVSSNGDFEFGFFRPGSANARYLGICYKKSPSTIFWVANRDKPLNNDRGKGVLRLNDRGVLLLLDATNNNTVWYSNHSSIRAYNTFAQLLDSGNLVVKNGYGGGDSGDFDQLLWQSFDHPCDTLMPGMKLGWDEETGLDKFLSSWKSSDDPGQGDYVMKLDRRGYPQIFQLSGSKVIVRAGSWNGVSFTGYSKHSPDPVEKLDFVLNEKEAYYKSSLINNSIFSRYIMTPSGIGQRFDWVIQTSSWRVMNTALPDSCDNYALCGANSICDINSNPVCKCLRGYEPKNFKEWNGSDWNSGCTKRVSLNCDASDGFKQYTGVKLPDTSSSWYNMTMALEECKRTCLQNCSCTAYASLDVRGEGSGCLIWLDQLVDMRQFLDGGQDLYVRVPASELDHFRDEGHGSIGKKEIAAIVVGCAIFVSSFMIFGLTLIARKRRLQDSGKCLTFQMNMFCHCSKTLNIVMINNNLVEEGMDLPTFDLSVIMKATDNFSTVNKLGEGGFGPVYKGILEDGQELAVKRLSTKSDQGLEELKNEVLLIAKLQHRNLVKLLGCCIEGEEKLLIYEYMPNKSLDHFIFDESCSNLLDWLKRWHIIHGIARGLVYLHIDSRLRIIHRDFKTSNILLDAYMNPKISDFGLARIFWDDQVVANTNKVVGTYGYMPPEYAVRGQFSMKSDVFSFGVIVLEIISGKKNREFSHPYLNLLGHAWRLWIQGRPLELLDECLKESCSQFEVVRCVQVGLLCVQQRAEDRPDMSTVILMLNGEKLLPQPKVPGFYTASDVLVGSSSLHQIFTQFSQNEISQMLDGRAGQGMPSALCPARKMSGLHFAARCPALPIEALTIFGLGGFGPVYKGILQDGQELAVKRLSTKSGQGLEELKNEVVLIAKLQHRNLVKLLGCCIEGKEKLLIYEYMPNKSLDHFIFDEVRSKLLDWLKRWHIIHGIARGLVYLHIDSRLRIIHRDLKTSNILLDTSMNPKISDFGLARTFWDDQVEANTNKIVGT 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4038g00007 1036 ProSiteProfiles PAN/Apple domain profile. 346 427 IPR003609 -
Pral4038g00007 1036 Gene3D Phosphorylase Kinase; domain 1 877 947 - -
Pral4038g00007 1036 SMART ntp_6 347 426 IPR003609 -
Pral4038g00007 1036 ProSiteProfiles Protein kinase domain profile. 871 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4038g00007 1036 Gene3D - 19 155 IPR036426 -
Pral4038g00007 1036 Pfam S-locus glycoprotein domain 217 325 IPR000858 GO:0048544
Pral4038g00007 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 992 1004 IPR008271 GO:0004672|GO:0006468
Pral4038g00007 1036 CDD STKc_IRAK 533 798 - -
Pral4038g00007 1036 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 345 426 - -
Pral4038g00007 1036 FunFam Uncharacterized protein 883 946 - -
Pral4038g00007 1036 ProSiteProfiles Protein kinase domain profile. 527 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4038g00007 1036 SMART blect_4 30 158 IPR001480 -
Pral4038g00007 1036 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 603 804 - -
Pral4038g00007 1036 Pfam D-mannose binding lectin 71 184 IPR001480 -
Pral4038g00007 1036 Gene3D Phosphorylase Kinase; domain 1 490 602 - -
Pral4038g00007 1036 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 492 602 - -
Pral4038g00007 1036 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 122 821 - -
Pral4038g00007 1036 CDD B_lectin 31 158 IPR001480 -
Pral4038g00007 1036 Gene3D Hepatocyte Growth Factor 343 424 - -
Pral4038g00007 1036 Pfam Protein kinase domain 875 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4038g00007 1036 Pfam Protein tyrosine and serine/threonine kinase 529 793 IPR001245 GO:0004672|GO:0006468
Pral4038g00007 1036 SMART serkin_6 527 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4038g00007 1036 Gene3D Transferase(Phosphotransferase) domain 1 948 1036 - -
Pral4038g00007 1036 Gene3D Transferase(Phosphotransferase) domain 1 603 802 - -
Pral4038g00007 1036 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 189 IPR036426 -
Pral4038g00007 1036 SUPERFAMILY Protein kinase-like (PK-like) 511 796 IPR011009 -
Pral4038g00007 1036 SUPERFAMILY Protein kinase-like (PK-like) 873 1036 IPR011009 -
Pral4038g00007 1036 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 947 1036 - -
Pral4038g00007 1036 CDD PAN_AP_plant 342 427 - -
Pral4038g00007 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Pral4038g00007 1036 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Pral4038g00007 1036 Pfam PAN-like domain 346 412 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4038g00007 Pral-Chr4038 56203 63682 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4038g00007 428 817 Receptor kinase-like Gene Family AT4G23190 48.232 4.61e-116 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4038g00007 PK_Tyr_Ser-Thr 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4038g00007 - - cave:132174511 1011.13