Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4038g00004 ATGGCGGATTGCGCGCTGTGCGGGAAGAGAGCGAGGATGTACTGTGAGTCGGACCAGGCTAAGCTATGCTGGCGCTGCGACGACAAGGTTCACGGCGCCAACTTTCTGGTGGCGAAGCACACCAGAGTTCTTCTCTGCCGTACCTGTCAGTCTTTCACTCCCTGGAAAGCCTGTGGTCCTAAGCTCACTCCGACTCACTCCATCTGTAACCACTGTGCCTCCGATTCCCACAAGCATCACCAGGAAGAAGATGATCGTGATGATCATCATCATGATCTCCGTGACAGTCCTGATCGTGAGGAGGAGGAGGAGCAGTATGATGCTGGAGATTCCAGTTCCGATGCTGACTCTGGTTATGAAGATGATGACGATGAAGACGAGGGAGAGGACGAGGAGGAGGAGGAGGAAGGAGAGAACCAGGTGGTTCCATGGTCTTGCGCTTCTGCTTCGGAGTCATCGCCGCCTCTTGCAAGTTCCGCTTCAGCTGGTTCTTCTTTGTCCTGGAAGCGGCGGCGATCGAGTGCGTTTGTCGATTCCGATGATGAGATCGGCTGTTCTTCATCTGAAATGCCCTCTGCCGCGCAACTACCAGACGATGATTCATCTTCTTGGAGCATCCTCAGGCCATGGAAGCATCCTAGAACTACTCCGCAGAGCTAA 660 0.5424 MADCALCGKRARMYCESDQAKLCWRCDDKVHGANFLVAKHTRVLLCRTCQSFTPWKACGPKLTPTHSICNHCASDSHKHHQEEDDRDDHHHDLRDSPDREEEEEQYDAGDSSSDADSGYEDDDDEDEGEDEEEEEEGENQVVPWSCASASESSPPLASSASAGSSLSWKRRRSSAFVDSDDEIGCSSSEMPSAAQLPDDDSSSWSILRPWKHPRTTPQS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4038g00004 219 MobiDBLite consensus disorder prediction 78 219 - -
Pral4038g00004 219 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Pral4038g00004 219 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 204 - -
Pral4038g00004 219 CDD Bbox1_BBX-like 4 45 - -
Pral4038g00004 219 SMART bboxneu5 1 45 IPR000315 GO:0008270
Pral4038g00004 219 MobiDBLite consensus disorder prediction 185 219 - -
Pral4038g00004 219 MobiDBLite consensus disorder prediction 143 172 - -
Pral4038g00004 219 MobiDBLite consensus disorder prediction 99 139 - -
Pral4038g00004 219 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Pral4038g00004 219 MobiDBLite consensus disorder prediction 78 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4038g00004 Pral-Chr4038 29720 30894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4038g00004 4 189 C2C2-CO-like Transcription Factor Family AT4G27310 42.079 2.65e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4038g00004 zf-B_box 4.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4038g00004 - - pcin:129314210 275.404