Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4036g00003 ATGGCATCCACGATCATGGCAGCCACCGCAAGCTCTAGCACTGTTCTTAAACCTTCCCCTTTTCTGGGTCAAACCAGAGGATCCAACTCCAACTCTCTCAGAGATGTTGTCCCCCTCGGAAATGGCAAATACACCATGGGAAATGAGTTGTGGTATGGACCAGACAGAGTGAAATACTTGGGTCCCTTTTCAGCTCAAACCCCTTCATATTTGACTGGGGAATTCCCTGGAGATTATGGCTGGGACACTGCTGGTTTATCTGCTGACCCAGAAGCATTTGCTAGGAACAGAGCTCTTGAGGTGATTCATGGGCGATGGGCGATGCTAGGAGCACTGGGATGCATCACACCAGAGGTTCTAGAAAAATGGGTGAGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCCGGAGCCCAGATTTTCTCAGAAGGAGGCCTTGATTACTTAGGTAATCCCAACCTGGTTCATGCCCAGAGCATCCTCGCCGTCCTTGGCTTCCAAGTGATCCTCATGGGTCTGGTTGAAGGCTTCCGCATCAACGGTCTTCCCGGTGTCGGAGAAGGCAACGACCTCTACCCCGGGGGCCAGTACTTCGACCCTCTAGGCCTCGCCGATGACCCTGACACTTTCGCTGAACTCAAGGTCAAGGAAATCAAGAATGGCAGGTTGGCCATGTTCTCCATGTTTGGCTTCTTTGTTCAAGCCATAGTTACTGGAAAAGGACCATTGGAGAATCTGTTGGATCACCTTGATAACCCTGTGGCTAATAATGCTTGGGTCTATGCCACCAAGTTCGTGCCTGGGTCTTAA 810 0.5099 MASTIMAATASSSTVLKPSPFLGQTRGSNSNSLRDVVPLGNGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4036g00003 269 FunFam Chlorophyll a-b binding protein, chloroplastic 58 262 - -
Pral4036g00003 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Pral4036g00003 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 12 268 IPR001344 GO:0009765|GO:0016020
Pral4036g00003 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Pral4036g00003 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4036g00003 Pral-Chr4036 27219 28745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4036g00003 12 268 Chloroplast and Mitochondria Gene Families AT2G05070 68.797 5.36e-125 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4036g00003 K08914 - vvi:100260599 530.406