Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4036g00002 ATGATGTTATCAGCATCGCCATCCTCGCTAGCGAGGAGTTCGCTAGAGGTAATGCTTGAATCGCTCCAGCGGAGAGAGGAAGAGGAGAATAAGCCAAAGGACTTGCCGCCGGCATTGCCAGCTCGTCCGACCTCCAAAGCTCGGCTTCCCTCCGCGAGAAGGTCATTGCCGAATAACTTAAACTTCATGGTTAATGGAGATCCTGGTGAGACAGAATGCCTTGCGAACGGATTTCATGATGCGAGCGAAGAGACTAAGCGGAAAGATACAGTTGATTTGGGACACAAGATAAACGGAAGCCTTGGGAGCAAGAAGTTGAAGAGGGATGTGGAATCGCCATACGCCCTCGCATCAGAAGAGAACCAGAGCGACCAAATATCATCTAAGAGTCTAGAATCCCACTCGGATGATAACGTTACCTATTTCATCAAGAAGAAACTTCATGTGTGGTGTAGGCAACCAAATCGGCACTGGGGACTAGGAAAGGTACAGTCAACTTCAAGAGAAGCTGCTTCAATTTTACTCACAAATGGAAATGTTATGAAAGTGGCCATATCAGAGCTCCTACCAGCTAATCCTGATATTCTAAAAGGCGTCAATGATCTCATGCAGCTGATTTATCTGAATGAGCCATCAGTTCTTCACACTCTTCGTTTTAGATATTCTCAAGGAATGATTTATAGTAAAGCAGGGCCCATTTTAATAGCACTCAATCCTTTCAAAGATGTCCAGAGTTGTGGAAATGATCACGCCACAACTTATAGTCAGAGATGCATGACTGACCCACATGTTTATACCGTGGCAAATGCAGCTTATAGTGAGATGATGAGAGACAAAGTAAATCAGTCCATCATCATAAGTGGTCAGAGTGGATCTGGGAAGACAGAGACAGCCAAAATCGCCTTGCAATATTTGGCTGCTCTGGGTGGTGGTAGCTGTGGCATAGAAAATAAAGCCCTTCAGACACATTTTATTCTAGAAGCTTTTGGGAATGCAAAAACACAAAGGCACAACAATTCTAGCAGATTTGGAAAGTCACTTGAGATTCATTTCACTGCAGCTGGGAAAATATGTGGAGCTAAAATTCAAACCTTCATGTTACAGAAGTCAAGAGTTGTTCAGCTGACCAGTGGTGAGAGGTCATATCACATCTTTTATCAACTTTGTGCTGGATCTTTACCTGGTCTTAAAGAGAAGCTGAATCTTAGAGAGGCCTGTGAATATAAATATCTTAATCAGAGTGACTGTATGACAATAGATGGTGTCGATGATGCTAAAATGTTTAATAACCTGCTGAATGCGCTGGATGTTGTTCAAATTTGCAAAGAGGATCAAGAACTAGTATTTAAAACCCTTGCTGCAATATTATGGCTTGGAAATGTATCATTTCAAATATCTGACAATGAAAATCATGTTGTGGTGGTGGATGATGAAGCTGTCACCAGTGCAGCCATGCTGATAGGTTGCAGTTCTCAAGAGTTAATGGTAACTTTATCTGTGTGTAAAGTCCAAGATGGCAAGGATACTATTGCTCGAAGTTCAACATTGAAGCAGGCAATAGAAAAAAGAGATGCATTGGCACAATTTATGTATGCAAGCTTGTTTGGGTGGCTCATAGAAAAAATTAACAATTCACTCGGAGCTGGCAAAAGGCATACTGGGAGATCCATAAATATTCTTGATATTTGTGGGTTTGAGTCATTCAAGAAAAACAGCTTTGAACAATTTTGTGTGAATTATGCTGATGAGAGGCTTCAACAACATTTCAATCGGCATATATTTAAACTTGAGCAGGAGAGCTATGCAATGGACGGTGTTCATTGGATTAAAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCATCGGGGATACTTTCATTGCTGGATGAGGAATCAAATTCGCCCAAGGCCACTGATCTCACATTTGCCAACAAACTTAAACAGCACCTGAATGCTAATCCTTGCTTTAAGGGGGAAAGAGGGAGGGCTTTTGGTGTTCGTCACTTTGCAGGAGAGGTTTTGTATGATACAAACGGCTTTCTACAGCAGAACAAAGATCTGCTGTCTTCCGACTGCATACAACTCCTGGCATCATGTAGTTGTCGGCTGCTGCAGTTGTTCTCGAAAATGCTTAGCCAAACACATAAACAATTGAATTCCTTACAAATAGGCGCATTAGACTCACAGAAGCTGAGTGTTGGTGCAAAGCTTAAGGGTCAATTGTTTGAATTAATGCACCAATTGGAGAACAGCACACCTCATTTTATTCACTGCATAAGGCCAAATACTAAGCGGCTTCCTGGCATATTTGATGAAGATCTTGTCATGCAACAACTCCGTTGCTGTGGAATCTTGGAGGCTGTTAGACTTTCTAGGATTGGATATCCTATCCAAATGACGCATCAAGAGTTCGCCGAAAGGTATGGGTTTCTGCTTCTGGAGACCAATGCAGTTCAGGATCCCCTGAGCATCTCAGTTGCTGTATTGCGACAATTTAATATCCCTCCTGAAGTGTATCAGTTCGGCTACACCAAAGTGCACTTGCGAAAAGGGCAGATTGGTGCATTGGAGGATAGAAGAAAACAGGTTATGCAGGGAATACTTCAGGTTCAAAAATGGTTCCGTGGTCATCGAGCCCGTCAATATTTCCATGAGCTTAAGAATGGGGTGACTACATTGCAATCATTTGCTCATGGGGAAATTTGGAGGAGGAAATTTGGTATAGTTGAGAAGTCTTCTATGACTATTGATTGTAAAAATTTTGACGAGATTGAGGCAATCATACTGCTACAATCAGTAATTCGTGGGTGGCTGGCTAGGAGGAAGAATGCTAGTGGTACGCATAAGATGAAGAAACACCTTAATAATGAAAAACTTCAGCGATATTCTCGTGTGAAGATGCTAGATATGAAGGAAGCATCCAGAGAGCAGGTTCAGAATTTGCCTTCAGCTTTAGAAGAACTCCGAAGGCGGGTGCTTAAGGCTGAGGCAACTCTTGAGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAGCTGAAACAAAACGAAACAAAATGGATTGAATATGAGGCGAAGATGAAATCAATGGAGGAGACGTGGCAAAAACAGATGGCATCTTTGCAAGTGAGTCTTGCTGCTGCTAGAAAAAGCCTTGCTTCTGACAACACCACTGCTTATCCTGGAAGACAAGAAGTTATGTCACCTCGCTACAATGATTCTGAAGATTTTAATTCCCTAATATCTCGAACTCCTGGTGGGAGCACACCTATCAAGTTTTCCAGCTCTCTCTCCGTCTCTGATTCTGGAGCGCCAGGAAGAGAAGTTAATGGTACCCTTTCTGCAGTCAGCAATCTGATGAGGGAATTCGAACAGAGAAGACAGACTTTTGATTACGATGCTAGGGCTCTGCTCGATGTCAAGGCCGGGCAGTCGGCTATCATGAATCCGGATGAAGAACTTAGGAAACTCAAACACAGGTTTGAGGGATGGAAGAAAGAATACAAGTTCAGATTACGGGAGACAAAAGCAAGGCTTCATAAAGTAGGGAATTCAGAAGGGGAAAGGAGCCGTCGGAGATGGTGGGGGAAGTTAAGCTCAAGAGCCTCATAG 3630 0.427 MMLSASPSSLARSSLEVMLESLQRREEEENKPKDLPPALPARPTSKARLPSARRSLPNNLNFMVNGDPGETECLANGFHDASEETKRKDTVDLGHKINGSLGSKKLKRDVESPYALASEENQSDQISSKSLESHSDDNVTYFIKKKLHVWCRQPNRHWGLGKVQSTSREAASILLTNGNVMKVAISELLPANPDILKGVNDLMQLIYLNEPSVLHTLRFRYSQGMIYSKAGPILIALNPFKDVQSCGNDHATTYSQRCMTDPHVYTVANAAYSEMMRDKVNQSIIISGQSGSGKTETAKIALQYLAALGGGSCGIENKALQTHFILEAFGNAKTQRHNNSSRFGKSLEIHFTAAGKICGAKIQTFMLQKSRVVQLTSGERSYHIFYQLCAGSLPGLKEKLNLREACEYKYLNQSDCMTIDGVDDAKMFNNLLNALDVVQICKEDQELVFKTLAAILWLGNVSFQISDNENHVVVVDDEAVTSAAMLIGCSSQELMVTLSVCKVQDGKDTIARSSTLKQAIEKRDALAQFMYASLFGWLIEKINNSLGAGKRHTGRSINILDICGFESFKKNSFEQFCVNYADERLQQHFNRHIFKLEQESYAMDGVHWIKVDFEDNQECLDLFEKKPSGILSLLDEESNSPKATDLTFANKLKQHLNANPCFKGERGRAFGVRHFAGEVLYDTNGFLQQNKDLLSSDCIQLLASCSCRLLQLFSKMLSQTHKQLNSLQIGALDSQKLSVGAKLKGQLFELMHQLENSTPHFIHCIRPNTKRLPGIFDEDLVMQQLRCCGILEAVRLSRIGYPIQMTHQEFAERYGFLLLETNAVQDPLSISVAVLRQFNIPPEVYQFGYTKVHLRKGQIGALEDRRKQVMQGILQVQKWFRGHRARQYFHELKNGVTTLQSFAHGEIWRRKFGIVEKSSMTIDCKNFDEIEAIILLQSVIRGWLARRKNASGTHKMKKHLNNEKLQRYSRVKMLDMKEASREQVQNLPSALEELRRRVLKAEATLEQKEEENTALREQLKQNETKWIEYEAKMKSMEETWQKQMASLQVSLAAARKSLASDNTTAYPGRQEVMSPRYNDSEDFNSLISRTPGGSTPIKFSSSLSVSDSGAPGREVNGTLSAVSNLMREFEQRRQTFDYDARALLDVKAGQSAIMNPDEELRKLKHRFEGWKKEYKFRLRETKARLHKVGNSEGERSRRRWWGKLSSRAS 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4036g00002 1209 PANTHER MYOSIN 190 1201 - -
Pral4036g00002 1209 Gene3D - 380 436 - -
Pral4036g00002 1209 SMART iq_5 928 950 IPR000048 GO:0005515
Pral4036g00002 1209 SMART iq_5 891 913 IPR000048 GO:0005515
Pral4036g00002 1209 SMART iq_5 868 890 IPR000048 GO:0005515
Pral4036g00002 1209 Gene3D Kinesin motor domain 196 800 IPR036961 -
Pral4036g00002 1209 MobiDBLite consensus disorder prediction 1 64 - -
Pral4036g00002 1209 PRINTS Myosin heavy chain signature 227 246 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00002 1209 PRINTS Myosin heavy chain signature 281 306 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00002 1209 PRINTS Myosin heavy chain signature 324 351 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00002 1209 PRINTS Myosin heavy chain signature 556 584 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00002 1209 PRINTS Myosin heavy chain signature 609 637 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00002 1209 CDD MYSc_Myo8 211 855 IPR036022 -
Pral4036g00002 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 948 IPR027417 -
Pral4036g00002 1209 Pfam IQ calmodulin-binding motif 873 890 IPR000048 GO:0005515
Pral4036g00002 1209 Pfam IQ calmodulin-binding motif 931 948 IPR000048 GO:0005515
Pral4036g00002 1209 Gene3D - 801 868 - -
Pral4036g00002 1209 Gene3D - 919 1050 - -
Pral4036g00002 1209 ProSiteProfiles IQ motif profile. 870 898 IPR000048 GO:0005515
Pral4036g00002 1209 MobiDBLite consensus disorder prediction 1187 1209 - -
Pral4036g00002 1209 MobiDBLite consensus disorder prediction 1187 1201 - -
Pral4036g00002 1209 FunFam Myosin heavy chain 380 436 - -
Pral4036g00002 1209 Gene3D Myosin VI head, motor domain, U50 subdomain 437 545 - -
Pral4036g00002 1209 Gene3D - 872 918 - -
Pral4036g00002 1209 Gene3D - 568 757 - -
Pral4036g00002 1209 Pfam Myosin head (motor domain) 199 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00002 1209 ProSiteProfiles Myosin motor domain profile. 197 867 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00002 1209 Coils Coil 977 1025 - -
Pral4036g00002 1209 MobiDBLite consensus disorder prediction 19 35 - -
Pral4036g00002 1209 SMART MYSc_2a 191 868 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00002 1209 MobiDBLite consensus disorder prediction 1 16 - -
Pral4036g00002 1209 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 144 193 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pral4036g00002 1209 ProSiteProfiles IQ motif profile. 929 958 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4036g00002 Pral-Chr4036 14212 26497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4036g00002 1 1203 Myosins gene family AT5G54280 58.610 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4036g00002 K10357 - gmx:100819335 1630.54