Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4036g00001 ATGATGTTATCAGCATCGCCATCCTCGCTAGCGAGGAGTTCGCTAGAGGTAATGCTTGAATCGCTCCAGCGGAGAGAGGAAGAGGAGAATAAGCCAAAGGACTTGCCGCCGGCATTGCCAGCTCGTCCGACCTCCAAAGCTCGGCTTCCCTCCGCGAGAAGGTCATTGCCGAATAACTTAAACTTCATGGTTAATGGAGATCCTGGTGAGACAGAATGCCTTGCGAACGGATTTCATGATGCGAGCGAAGAGACTAAGCGGAAAGATACAGTTGATTTGGGACACAAGATAAACGGAAGCCTTGGGAGCAAGAAGTTGAAGAGGGATGTGGAATCGCCATACGCCCTCGCATCGGATGATAACGTTACCTATTTCATCAAGAAGAAACTTCATGTGTGGTGTAGGCAACCAAATCGGCACTGGGGACTAGGAAAGGTACAGTCAACTTCAAGAGAAGCTGCTTCAATTTTACTCACAAATGGAAATGTTATGAAAGTGGCCATATCAGAGCTCCTACCAGCTAATCCTGATATTCTAAAAGGCGTCAATGATCTCATGCAGCTGATTTATCTGAATGAGCCATCAGTTCTTCACACTCTTCGTTTTAGATATTCTCAAGGAATGATTTATAGTAAAGCAGGGCCCATTTTAATAGCACTCAATCCTTTCAAAGATGTCCAGAGTTGTGGAAATGATCACGCCACAACTTATAGTCAGAGATGCATGACTGACCCACATGTTTATACCGTGGCAAATGCAGCTTATAGTGAGATGATGAGAGACAAAGTAAATCAGTCCATCATCATAAGTGGTCAGAGTGGATCTGGGAAGACAGAGACAGCCAAAATCGCCTTGCAATATTTGGCTGCTCTGGGTGGTGGTAGCTGTGGCATAGAAAATAAAGCCCTTCAGACACATTTTATTCTAGAAGCTTTTGGGAATGCAAAAACACAAAGGCACAACAATTCTAGCAGATTTGGAAAGTCACTTGAGATTCATTTCACTGCAGCTGGGAAAATATGTGGAGCTAAAATTCAAACCTTCATGTTACAGAAGTCAAGAGTTGTTCAGCTGACCAGTGGTGAGAGGTCATATCACATCTTTTATCAACTTTGTGCTGGATCTTTACCTGGTCTTAAAGAGAAGCTGAATCTTAGAGAGGCCTGTGAATATAAATATCTTAATCAGAGTGACTGTATGACAATAGATGGTGTCGATGATGCTAAAATGTTTAATAACCTGCTGAATGCGCTGGATGTTGTTCAAATTTGCAAAGAGGATCAAGAACTAGTATTTAAAACCCTTGCTGCAATATTATGGCTTGGAAATGTATCATTTCAAATATCTGACAATGAAAATCATGTTGTGGTGGTGGATGATGAAGCTGTCACCAGTGCAGCCATGCTGATAGGTTGCAGTTCTCAAGAGTTAATGGTAACTTTATCTGTGTGTAAAGTCCAAGATGGCAAGGATACTATTGCTCGAAGTTCAACATTGAAGCAGGCAATAGAAAAAAGAGATGCATTGGCACAATTTATGTATGCAAGCTTGTTTGGGTGGCTCATAGAAAAAATTAACAATTCACTCGGAGCTGGCAAAAGGCATACTGGGAGATCCATAAATATTCTTGATATTTGTGGGTTTGAGTCATTCAAGAAAAACAGCTTTGAACAATTTTGTGTGAATTATGCTGATGAGAGGCTTCAACAACATTTCAATCGGCATATATTTAAACTTGAGCAGGAGAGCTATGCAATGGACGGTGTTCATTGGATTAAAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCATCGGGGATACTTTCATTGCTGGATGAGGAATCAAATTCGCCCAAGGCCACTGATCTCACATTTGCCAACAAACTTAAACAGCACCTGAATGCTAATCCTTGCTTTAAGGGGGAAAGAGGGAGGGCTTTTGGTGTTCGTCACTTTGCAGGAGAGGTTTTGTATGATACAAACGGCTTTCTACAGCAGAACAAAGATCTGCTGTCTTCCGACTGCATACAACTCCTGGCATCATGTAGTTGTCGGCTGCTGCAGTTGTTCTCGAAAATGCTTAGCCAAACACATAAACAATTGAATTCCTTACAAATAGGCGCATTAGACTCACAGAAGCTGAGTGTTGGTGCAAAGCTTAAGGGTCAATTGTTTGAATTAATGCACCAATTGGAGAACAGCACACCTCATTTTATTCACTGCATAAGGCCAAATACTAAGCGGCTTCCTGGCATATTTGATGAAGATCTTGTCATGCAACAACTCCGTTGCTGTGGAATCTTGGAGGCTGTTAGACTTTCTAGGATTGGATATCCTATCCAAATGACGCATCAAGAGTTCGCCGAAAGGTATGGGTTTCTGCTTCTGGAGACCAATGCAGTTCAGGATCCCCTGAGCATCTCAGTTGCTGTATTGCGACAATTTAATATCCCTCCTGAAGTGTATCAGTTCGGCTACACCAAAGTGCACTTGCGAAAAGGGCAGATTGGTGCATTGGAGGATAGAAGAAAACAGGTTATGCAGGGAATACTTCAGGTTCAAAAATGGTTCCGTGGTCATCGAGCCCGTCAATATTTCCATGAGCTTAAGAATGGGGTGACTACATTGCAATCATTTGCTCATGGGGAAATTTGGAGGAGGAAATTTGGTATAGTTGAGAAGTCTTCTATGACTATTGATTGTAAAAATTTTGACGAGATTGAGGCAATCATACTGCTACAATCAGTAATTCGTGGGTGGCTGGCTAGGAGGAAGAATGCTAGTGGTACGCATAAGATGAAGAAACACCTTAATAATGAAAAACTTCAGCGATATTCTCGTGTGAAGATGCTAGATATGAAGGAAGCATCCAGAGAGCAGGTTCAGAATTTGCCTTCAGCTTTAGAAGAACTCCGAAGGCGGGTGCTTAAGGCTGAGGCAACTCTTGAGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAGCTGAAACAAAACGAAACAAAATGGATTGAATATGAGGCGAAGATGAAATCAATGGAGGAGACGTGGCAAAAACAGATGGCATCTTTGCAAGTGAGTCTTGCTGCTGCTAGAAAAAGCCTTGCTTCTGACAACACCACTGCTTATCCTGGAAGACAAGAAGTTATGTCACCTCGCTACAATGATTCTGAAGATTTTAATTCCCTAATATCTCGAACTCCTGGTGGGAGCACACCTATCAAGTTTTCCAGCTCTCTCTCCGTCTCTGATTCTGGAGCGCCAGGAAGAGAAGTTAATGGTACCCTTTCTGCAGTCAGCAATCTGATGAGGGAATTCGAACAGAGAAGACAGACTTTTGATTACGATGCTAGGGCTCTGCTCGATGTCAAGGCCGGGCAGTCGGCTATCATGAATCCGGATGAAGAACTTAGGAAACTCAAACACAGGTTTGAGGGATGGAAGAAAGAATACAAGTTCAGATTACGGGAGACAAAAGCAAGGCTTCATAAAGTAGGGAATTCAGAAGGGGAAAGGAGCCGTCGGAGATGGTGGGGGAAGTTAAGCTCAAGAGCCTCATAG 3579 0.4269 MMLSASPSSLARSSLEVMLESLQRREEEENKPKDLPPALPARPTSKARLPSARRSLPNNLNFMVNGDPGETECLANGFHDASEETKRKDTVDLGHKINGSLGSKKLKRDVESPYALASDDNVTYFIKKKLHVWCRQPNRHWGLGKVQSTSREAASILLTNGNVMKVAISELLPANPDILKGVNDLMQLIYLNEPSVLHTLRFRYSQGMIYSKAGPILIALNPFKDVQSCGNDHATTYSQRCMTDPHVYTVANAAYSEMMRDKVNQSIIISGQSGSGKTETAKIALQYLAALGGGSCGIENKALQTHFILEAFGNAKTQRHNNSSRFGKSLEIHFTAAGKICGAKIQTFMLQKSRVVQLTSGERSYHIFYQLCAGSLPGLKEKLNLREACEYKYLNQSDCMTIDGVDDAKMFNNLLNALDVVQICKEDQELVFKTLAAILWLGNVSFQISDNENHVVVVDDEAVTSAAMLIGCSSQELMVTLSVCKVQDGKDTIARSSTLKQAIEKRDALAQFMYASLFGWLIEKINNSLGAGKRHTGRSINILDICGFESFKKNSFEQFCVNYADERLQQHFNRHIFKLEQESYAMDGVHWIKVDFEDNQECLDLFEKKPSGILSLLDEESNSPKATDLTFANKLKQHLNANPCFKGERGRAFGVRHFAGEVLYDTNGFLQQNKDLLSSDCIQLLASCSCRLLQLFSKMLSQTHKQLNSLQIGALDSQKLSVGAKLKGQLFELMHQLENSTPHFIHCIRPNTKRLPGIFDEDLVMQQLRCCGILEAVRLSRIGYPIQMTHQEFAERYGFLLLETNAVQDPLSISVAVLRQFNIPPEVYQFGYTKVHLRKGQIGALEDRRKQVMQGILQVQKWFRGHRARQYFHELKNGVTTLQSFAHGEIWRRKFGIVEKSSMTIDCKNFDEIEAIILLQSVIRGWLARRKNASGTHKMKKHLNNEKLQRYSRVKMLDMKEASREQVQNLPSALEELRRRVLKAEATLEQKEEENTALREQLKQNETKWIEYEAKMKSMEETWQKQMASLQVSLAAARKSLASDNTTAYPGRQEVMSPRYNDSEDFNSLISRTPGGSTPIKFSSSLSVSDSGAPGREVNGTLSAVSNLMREFEQRRQTFDYDARALLDVKAGQSAIMNPDEELRKLKHRFEGWKKEYKFRLRETKARLHKVGNSEGERSRRRWWGKLSSRAS 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4036g00001 1192 ProSiteProfiles IQ motif profile. 912 941 IPR000048 GO:0005515
Pral4036g00001 1192 MobiDBLite consensus disorder prediction 1 59 - -
Pral4036g00001 1192 SMART MYSc_2a 174 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00001 1192 PANTHER MYOSIN 173 1184 - -
Pral4036g00001 1192 Gene3D - 902 1033 - -
Pral4036g00001 1192 Gene3D - 784 851 - -
Pral4036g00001 1192 ProSiteProfiles Myosin motor domain profile. 180 850 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00001 1192 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pral4036g00001 1192 Gene3D - 551 740 - -
Pral4036g00001 1192 SMART iq_5 911 933 IPR000048 GO:0005515
Pral4036g00001 1192 SMART iq_5 874 896 IPR000048 GO:0005515
Pral4036g00001 1192 SMART iq_5 851 873 IPR000048 GO:0005515
Pral4036g00001 1192 MobiDBLite consensus disorder prediction 1170 1184 - -
Pral4036g00001 1192 Gene3D Kinesin motor domain 179 783 IPR036961 -
Pral4036g00001 1192 Pfam Myosin head (motor domain) 182 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00001 1192 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00001 1192 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00001 1192 PRINTS Myosin heavy chain signature 307 334 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00001 1192 PRINTS Myosin heavy chain signature 539 567 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00001 1192 PRINTS Myosin heavy chain signature 592 620 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pral4036g00001 1192 Coils Coil 960 1008 - -
Pral4036g00001 1192 FunFam Myosin heavy chain 363 419 - -
Pral4036g00001 1192 Gene3D - 855 901 - -
Pral4036g00001 1192 Gene3D Myosin VI head, motor domain, U50 subdomain 420 528 - -
Pral4036g00001 1192 CDD MYSc_Myo8 194 838 IPR036022 -
Pral4036g00001 1192 MobiDBLite consensus disorder prediction 19 35 - -
Pral4036g00001 1192 Pfam IQ calmodulin-binding motif 914 931 IPR000048 GO:0005515
Pral4036g00001 1192 Pfam IQ calmodulin-binding motif 856 873 IPR000048 GO:0005515
Pral4036g00001 1192 MobiDBLite consensus disorder prediction 1170 1192 - -
Pral4036g00001 1192 MobiDBLite consensus disorder prediction 1 16 - -
Pral4036g00001 1192 ProSiteProfiles IQ motif profile. 853 881 IPR000048 GO:0005515
Pral4036g00001 1192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 931 IPR027417 -
Pral4036g00001 1192 Gene3D - 363 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4036g00001 Pral-Chr4036 14211 26497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4036g00001 1 1186 Myosins gene family AT5G54280 58.044 0.0 1410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4036g00001 K10357 - gmx:100819335 1617.05