Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4035g00001 ATGAACGGGAAGGCCAACGTTTCTAAAGAGCTCAACGCAAAGCATAAAAAGATATTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCTGACTGCAAAGCTAAAGGTCCAAGGTGGGCTAGTGTGAACCTAGGCATCTTTATCTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTACATATTTCAAAGGTTCGGTCTGCAACTTTGGATACCTGGCTTCCAGAGCAGGTTGCATTCATTCAATCCATGGGAAATGAAAAAGCTAATTCTTACTGGGAAGCAGAACTGCCCCCAAATTATGATAGAGTTGGAATAGAGAATTTTATTCGTGCAAAATATGAAGAGAAGAGATGGATTCCGAGGGATGGAAAACTAAAATCACCTTCTAGGCAGCAGGACGACAGGGCTTCTTCAAATTGGCAGAGGTCTGCAGAAAGAAGTGGGCATGGTTATACAATTGCTCCTGAGAACACTTTTCATGAAAGGAAGAAAATTCAGGCAACAAATACGGTTCCTGCAACAAGGAATAATGTTCCTGCTCCTCCAAAAGCACCTGAACAGGTAACTCCTGCAAAACCTCAGCGTGTAGAGAAAGTGGAACCTGTGGCTCCAAAACTGCAAGCTGAATCAACAAAACAAGCTGCTGATGTGGCTCAGAATACCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACTTGTTATCCATGGATGGCCCTAGTGAAAATGGCACAGAGGAAGCTGGTACTACTACTGGCGATAGTAACTGGGAAGGTTTTCAGTCCGCTGCAGAAGCATCGACAACTGGGAAGACTGGTTCCACAAAAGCAGTGGAGAGCACTCCCAAGTCTAATTCTGGAATTGAGGATCTATTTAAGGACTCACCTTCAGTGACTCCTTTAGTTCCAGAAAAACCTCCGAAAGATTTGAAGAATGATATCATGAGCCTCTTTGAAAAGTCCAACATGGTCTCTCCATTTTCTGCGCACCAGCAACAGCTTGCCATGCTTGCACAGCAACAGTCCCTTCTAATGGCTGCTTCAGCCAACTCTGCTGGTGGGAACCCCAAGTATCCTGGTAGTATGCAACAACCCGGACTGAATGGATCCAATATTCCTGTCCCAAGTTGGCCCACTGCCGGTTACCCAATTCCCGGAGTATTGCCAATGGCTGGTCAGGGAGAGCTGCAGAAACTGATGCAGACTAGGAGCACGACTCCAGCAAATCCTGCGTTGAATTCTGTGCAGTATTCAACATCTAGTTTCTATACAATGGGACAGGCTAGACCCGTTAATGGTGTCACGACGATGGGAGCGAGTAAAGCTCCGCCAGCAGCTTCAATGTCGCCATCAACCTCCTCACAGGCGCCAAAGGACTATGACTTCTCCTCTTTAACGCAAGGGATGTTTGCCAAACAGTGA 1434 0.4609 MNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWIPRDGKLKSPSRQQDDRASSNWQRSAERSGHGYTIAPENTFHERKKIQATNTVPATRNNVPAPPKAPEQVTPAKPQRVEKVEPVAPKLQAESTKQAADVAQNTPPKVDYATDLFNLLSMDGPSENGTEEAGTTTGDSNWEGFQSAAEASTTGKTGSTKAVESTPKSNSGIEDLFKDSPSVTPLVPEKPPKDLKNDIMSLFEKSNMVSPFSAHQQQLAMLAQQQSLLMAASANSAGGNPKYPGSMQQPGLNGSNIPVPSWPTAGYPIPGVLPMAGQGELQKLMQTRSTTPANPALNSVQYSTSSFYTMGQARPVNGVTTMGASKAPPAASMSPSTSSQAPKDYDFSSLTQGMFAKQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4035g00001 477 CDD ArfGap 19 117 - -
Pral4035g00001 477 MobiDBLite consensus disorder prediction 267 296 - -
Pral4035g00001 477 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Pral4035g00001 477 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Pral4035g00001 477 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Pral4035g00001 477 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Pral4035g00001 477 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 477 IPR044520 GO:0005096
Pral4035g00001 477 MobiDBLite consensus disorder prediction 267 311 - -
Pral4035g00001 477 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Pral4035g00001 477 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Pral4035g00001 477 MobiDBLite consensus disorder prediction 136 150 - -
Pral4035g00001 477 MobiDBLite consensus disorder prediction 438 477 - -
Pral4035g00001 477 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Pral4035g00001 477 MobiDBLite consensus disorder prediction 126 200 - -
Pral4035g00001 477 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Pral4035g00001 477 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Pral4035g00001 477 MobiDBLite consensus disorder prediction 449 477 - -
Pral4035g00001 477 MobiDBLite consensus disorder prediction 243 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4035g00001 Pral-Chr4035 2685 9176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4035g00001 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 3.11e-30 118