Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4034g00015 | ATGAACGGGAAGGCCAACGTTTCTAAAGAGCTCAACGCAAAGCATAAAAAGATATTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCTGACTGCAAAGCTAAAGGTCCAAGGTGGGCTAGTGTGAACCTAGGCATCTTTATCTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTACATATTTCAAAGGTTCGGTCTGCAACTTTGGATACCTGGCTTCCAGAGCAGGTTGCATTCATTCAATCCATGGGAAATGAAAAAGCTAATTCTTACTGGGAAGCAGAACTACCCCCAAATTATGATAGAGTTGGAATAGAGAATTTTATTCGTGCAAAATATGAAGAGAAGAGATGGATTCCGAGGGATGGAAAACTAAAATCACCTTCTAGGCAGCAGGACGACAGGGCTTCTTCAAATTGGCAGAGGCCTGCAGAAAGAAGTGGGCATGGTTATACAATTGCTCCTGAGAACACTTTTCATGAAAGGAAGAAAATTCAGGCAACAAATACGGTTCCTGCAACAAGGAATAATGTTCCTGCTCCTCCAAAAGCACCTGAACAGGTAACTCCTGCAAAACCTCAGCATGTAGAGAAAGTGGAACCTGTGGCTCCAAAACTGCAAGCTGAATCAACAAAACAAGCTGCTGATGTGGCTCAGAATACCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACTTGTTATCCATGGATGGCCCTAGTGAAAATGGCACAGAGGAAGCTGAAGCATCGACAACTGGGAAGACTGGTTCCACAAAAGCAGTGGAGAGCACTCCCAAGTCTAATTCTGGAATTGAGGATCTATTTAAGGACTCACCTTCAGTGACTCCTTTAGTTCCAGAAAAACCTCCGAAAGATTTGAAGAATGATATCATGAGCCTCTTTGAAAAGTCCAACATGGTCTCTCCATTTTCTGCGCACCAGCAACAGCTTGCCATGCTTGCACAGCAACAGTCCCTTCTAATGGCTGCTTCAGCCAACTCTGCTGGTGGGAACCCCAAGTATCCTGGTAGTATGCAACAACCCGGACTGAATGGATCCAATATTCCTGTCCCAAGTTGGCCCACTGCCGGTTACCCAATTCCCGGAGTATTGCCAATGGCTGGTCAGGGAGAGCTGCAGAAACTGATGCAGACTAGGAGCACGACTCCAGCAAATCCTGCGTTGAATTCTGTGCAGTATTCAACATCTAGTTTCTATACAATGGGACAGGCTAGACCCGTTAATGGTGTCACGACGATGGGAGCGAGTAAAGCTCCGCCAGCAGCTTCAATGTCGCCATCAACCTCCTCACAGGCGCCAAAGGACTATGACTTCTCCTCTTTAACGCAAGGGATGTTTGCCAAACAGTGA | 1386 | 0.4589 | MNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWIPRDGKLKSPSRQQDDRASSNWQRPAERSGHGYTIAPENTFHERKKIQATNTVPATRNNVPAPPKAPEQVTPAKPQHVEKVEPVAPKLQAESTKQAADVAQNTPPKVDYATDLFNLLSMDGPSENGTEEAEASTTGKTGSTKAVESTPKSNSGIEDLFKDSPSVTPLVPEKPPKDLKNDIMSLFEKSNMVSPFSAHQQQLAMLAQQQSLLMAASANSAGGNPKYPGSMQQPGLNGSNIPVPSWPTAGYPIPGVLPMAGQGELQKLMQTRSTTPANPALNSVQYSTSSFYTMGQARPVNGVTTMGASKAPPAASMSPSTSSQAPKDYDFSSLTQGMFAKQ | 461 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4034g00015 | 461 | CDD | ArfGap | 19 | 117 | - | - | |
Pral4034g00015 | 461 | MobiDBLite | consensus disorder prediction | 126 | 199 | - | - | |
Pral4034g00015 | 461 | MobiDBLite | consensus disorder prediction | 242 | 295 | - | - | |
Pral4034g00015 | 461 | Pfam | Putative GTPase activating protein for Arf | 17 | 123 | IPR001164 | GO:0005096 | |
Pral4034g00015 | 461 | Gene3D | Arf GTPase activating protein | 2 | 129 | IPR038508 | - | |
Pral4034g00015 | 461 | MobiDBLite | consensus disorder prediction | 422 | 461 | - | - | |
Pral4034g00015 | 461 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 15 | 124 | IPR037278 | - | |
Pral4034g00015 | 461 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 16 | 130 | IPR001164 | GO:0005096 | |
Pral4034g00015 | 461 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 | 1 | 461 | IPR044520 | GO:0005096 | |
Pral4034g00015 | 461 | PRINTS | HIV Rev interacting protein signature | 28 | 47 | IPR001164 | GO:0005096 | |
Pral4034g00015 | 461 | PRINTS | HIV Rev interacting protein signature | 68 | 89 | IPR001164 | GO:0005096 | |
Pral4034g00015 | 461 | PRINTS | HIV Rev interacting protein signature | 47 | 64 | IPR001164 | GO:0005096 | |
Pral4034g00015 | 461 | FunFam | stromal membrane-associated protein 1 isoform X1 | 1 | 128 | - | - | |
Pral4034g00015 | 461 | MobiDBLite | consensus disorder prediction | 242 | 280 | - | - | |
Pral4034g00015 | 461 | SMART | arf_gap_3 | 16 | 130 | IPR001164 | GO:0005096 | |
Pral4034g00015 | 461 | MobiDBLite | consensus disorder prediction | 433 | 461 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4034g00015 | Pral-Chr4034 | 78511 | 84953 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4034g00015 | 16 | 123 | C2H2 Transcription Factor Family | AT4G05330 | 49.138 | 2.95e-30 | 118 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4034g00015 | K12486 | - | gmx:100789910 | 615.15 |