Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4034g00015 ATGAACGGGAAGGCCAACGTTTCTAAAGAGCTCAACGCAAAGCATAAAAAGATATTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCTGACTGCAAAGCTAAAGGTCCAAGGTGGGCTAGTGTGAACCTAGGCATCTTTATCTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTACATATTTCAAAGGTTCGGTCTGCAACTTTGGATACCTGGCTTCCAGAGCAGGTTGCATTCATTCAATCCATGGGAAATGAAAAAGCTAATTCTTACTGGGAAGCAGAACTACCCCCAAATTATGATAGAGTTGGAATAGAGAATTTTATTCGTGCAAAATATGAAGAGAAGAGATGGATTCCGAGGGATGGAAAACTAAAATCACCTTCTAGGCAGCAGGACGACAGGGCTTCTTCAAATTGGCAGAGGCCTGCAGAAAGAAGTGGGCATGGTTATACAATTGCTCCTGAGAACACTTTTCATGAAAGGAAGAAAATTCAGGCAACAAATACGGTTCCTGCAACAAGGAATAATGTTCCTGCTCCTCCAAAAGCACCTGAACAGGTAACTCCTGCAAAACCTCAGCATGTAGAGAAAGTGGAACCTGTGGCTCCAAAACTGCAAGCTGAATCAACAAAACAAGCTGCTGATGTGGCTCAGAATACCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACTTGTTATCCATGGATGGCCCTAGTGAAAATGGCACAGAGGAAGCTGAAGCATCGACAACTGGGAAGACTGGTTCCACAAAAGCAGTGGAGAGCACTCCCAAGTCTAATTCTGGAATTGAGGATCTATTTAAGGACTCACCTTCAGTGACTCCTTTAGTTCCAGAAAAACCTCCGAAAGATTTGAAGAATGATATCATGAGCCTCTTTGAAAAGTCCAACATGGTCTCTCCATTTTCTGCGCACCAGCAACAGCTTGCCATGCTTGCACAGCAACAGTCCCTTCTAATGGCTGCTTCAGCCAACTCTGCTGGTGGGAACCCCAAGTATCCTGGTAGTATGCAACAACCCGGACTGAATGGATCCAATATTCCTGTCCCAAGTTGGCCCACTGCCGGTTACCCAATTCCCGGAGTATTGCCAATGGCTGGTCAGGGAGAGCTGCAGAAACTGATGCAGACTAGGAGCACGACTCCAGCAAATCCTGCGTTGAATTCTGTGCAGTATTCAACATCTAGTTTCTATACAATGGGACAGGCTAGACCCGTTAATGGTGTCACGACGATGGGAGCGAGTAAAGCTCCGCCAGCAGCTTCAATGTCGCCATCAACCTCCTCACAGGCGCCAAAGGACTATGACTTCTCCTCTTTAACGCAAGGGATGTTTGCCAAACAGTGA 1386 0.4589 MNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWIPRDGKLKSPSRQQDDRASSNWQRPAERSGHGYTIAPENTFHERKKIQATNTVPATRNNVPAPPKAPEQVTPAKPQHVEKVEPVAPKLQAESTKQAADVAQNTPPKVDYATDLFNLLSMDGPSENGTEEAEASTTGKTGSTKAVESTPKSNSGIEDLFKDSPSVTPLVPEKPPKDLKNDIMSLFEKSNMVSPFSAHQQQLAMLAQQQSLLMAASANSAGGNPKYPGSMQQPGLNGSNIPVPSWPTAGYPIPGVLPMAGQGELQKLMQTRSTTPANPALNSVQYSTSSFYTMGQARPVNGVTTMGASKAPPAASMSPSTSSQAPKDYDFSSLTQGMFAKQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4034g00015 461 CDD ArfGap 19 117 - -
Pral4034g00015 461 MobiDBLite consensus disorder prediction 126 199 - -
Pral4034g00015 461 MobiDBLite consensus disorder prediction 242 295 - -
Pral4034g00015 461 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Pral4034g00015 461 Gene3D Arf GTPase activating protein 2 129 IPR038508 -
Pral4034g00015 461 MobiDBLite consensus disorder prediction 422 461 - -
Pral4034g00015 461 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Pral4034g00015 461 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Pral4034g00015 461 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 461 IPR044520 GO:0005096
Pral4034g00015 461 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Pral4034g00015 461 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Pral4034g00015 461 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Pral4034g00015 461 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Pral4034g00015 461 MobiDBLite consensus disorder prediction 242 280 - -
Pral4034g00015 461 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Pral4034g00015 461 MobiDBLite consensus disorder prediction 433 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4034g00015 Pral-Chr4034 78511 84953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4034g00015 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 2.95e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4034g00015 K12486 - gmx:100789910 615.15