Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4034g00014 ATGAACGGGAAGGCCAACGTTTCTAAAGAGCTCAACGCAAAGCATAAAAAGATATTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCTGACTGCAAAGCTAAAGGTCCAAGGTGGGCTAGTGTGAACCTAGGCATCTTTATCTGCATGCAGTGTTCAGGAATACATCGAAGTCTTGGGGTACATATTTCAAAGGTTCGGTCTGCAACTTTGGATACCTGGCTTCCAGAGCAGGTTGCATTCATTCAATCCATGGGAAATGAAAAAGCTAATTCTTACTGGGAAGCAGAACTACCCCCAAATTATGATAGAGTTGGAATAGAGAATTTTATTCGTGCAAAATATGAAGAGAAGAGATGGATTCCGAGGGATGGAAAACTAAAATCACCTTCTAGGCAGCAGGACGACAGGGCTTCTTCAAATTGGCAGAGGCCTGCAGAAAGAAGTGGGCATGGTTATACAATTGCTCCTGAGAACACTTTTCATGAAAGGAAGAAAATTCAGGCAACAAATACGGTTCCTGCAACAAGGAATAATGTTCCTGCTCCTCCAAAAGCACCTGAACAGGTAACTCCTGCAAAACCTCAGCATGTAGAGAAAGTGGAACCTGTGGCTCCAAAACTGCAAGCTGAATCAACAAAACAAGCTGCTGATGTGGCTCAGAATACCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACTTGTTATCCATGGATGGCCCTAGTGAAAATGGCACAGAGGAAGCTGCCGCTGCAGAAGCATCGACAACTGGGAAGACTGGTTCCACAAAAGCAGTGGAGAGCACTCCCAAGTCTAATTCTGGAATTGAGGATCTATTTAAGGACTCACCTTCAGTGACTCCTTTAGTTCCAGAAAAACCTCCGAAAGATTTGAAGAATGATATCATGAGCCTCTTTGAAAAGTCCAACATGGTCTCTCCATTTTCTGCGCACCAGCAACAGCTTGCCATGCTTGCACAGCAACAGTCCCTTCTAATGGCTGCTTCAGCCAACTCTGCTGGTGGGAACCCCAAGTATCCTGGTAGTATGCAACAACCCGGACTGAATGGATCCAATATTCCTGTCCCAAGTTGGCCCACTGCCGGTTACCCAATTCCCGGAGTATTGCCAATGGCTGGTCAGGGAGAGCTGCAGAAACTGATGCAGACTAGGAGCACGACTCCAGCAAATCCTGCGTTGAATTCTGTGCAGTATTCAACATCTAGTTTCTATACAATGGGACAGGCTAGACCCGTTAATGGTGTCACGACGATGGGAGCGAGTAAAGCTCCGCCAGCAGCTTCAATGTCGCCATCAACCTCCTCACAGGCGCCAAAGGACTATGACTTCTCCTCTTTAACGCAAGGGATGTTTGCCAAACAGTGA 1395 0.4609 MNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWIPRDGKLKSPSRQQDDRASSNWQRPAERSGHGYTIAPENTFHERKKIQATNTVPATRNNVPAPPKAPEQVTPAKPQHVEKVEPVAPKLQAESTKQAADVAQNTPPKVDYATDLFNLLSMDGPSENGTEEAAAAEASTTGKTGSTKAVESTPKSNSGIEDLFKDSPSVTPLVPEKPPKDLKNDIMSLFEKSNMVSPFSAHQQQLAMLAQQQSLLMAASANSAGGNPKYPGSMQQPGLNGSNIPVPSWPTAGYPIPGVLPMAGQGELQKLMQTRSTTPANPALNSVQYSTSSFYTMGQARPVNGVTTMGASKAPPAASMSPSTSSQAPKDYDFSSLTQGMFAKQ 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4034g00014 464 CDD ArfGap 19 117 - -
Pral4034g00014 464 Gene3D Arf GTPase activating protein 2 129 IPR038508 -
Pral4034g00014 464 MobiDBLite consensus disorder prediction 126 199 - -
Pral4034g00014 464 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Pral4034g00014 464 MobiDBLite consensus disorder prediction 425 464 - -
Pral4034g00014 464 MobiDBLite consensus disorder prediction 242 298 - -
Pral4034g00014 464 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Pral4034g00014 464 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 464 IPR044520 GO:0005096
Pral4034g00014 464 MobiDBLite consensus disorder prediction 252 283 - -
Pral4034g00014 464 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Pral4034g00014 464 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Pral4034g00014 464 MobiDBLite consensus disorder prediction 436 464 - -
Pral4034g00014 464 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Pral4034g00014 464 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Pral4034g00014 464 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Pral4034g00014 464 SMART arf_gap_3 16 130 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4034g00014 Pral-Chr4034 78511 84953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4034g00014 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 3.06e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4034g00014 K12486 - gmx:100789910 610.142