Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4034g00002 ATGTATCGCTTGAACATGGGAGGCCACTCTGTAGTCCCTTCACAAAACAGCACTCTTTTCAGAGTTTGGGAAGAAGACGATAAGTATCTTCAGCCTAACCCTTTAGCCTCAAATATGTCGGTGAACCCATTCTCCATAAAGTCTTCATCCAACGACTTCGGGTCTTCCGAGGTAGCACCTGCAGATGTTTATGCCACCGCAAAAGCCTTGACAAATATTTCGAGCAAGTCCAATTTGACATGGGTCTTTCCAGTCAATCCAAAGTTCAAATACATTCTGAGGATGCATTTCTGCGATATAATTAGCAAGTCCAGGAACAGCTTGTTTTTCAATGTGTACGTAAACTCTGAGGTTCTGATGAAAAATCTGAGTCTATCAGCCTTCACCTATGATGTTGGTGTTCCATACGTCATCGACTATGTCAACAATAATATTTCTGAAGAAGCTTCAGACAAATTGAGCGTGACTGTGGAAACTGGTGGCCCTGAGCAGGGCCTTAATGCTATCTCGAACGGGCTAGAGATTCTGAAAATGAGCAACGAGGTAAGAAGCTTGGATGGGCTTTCCTCAGTTGACAATATATTTGCAAAATCAGATCAGAAAATTCCAAAATTAGCATTAATCATTTCGAGCTGTGGCATGGCTGCTCTGTGTTTGTCCGCATGTGTTATCTATTACTTTTATGGTCGCATAAGAGCTGGCAAGTCCAACAGAACTTGGTCAAACAGCGAAGGAAGACTCAGAATATTCACATTCGAGGAGATTCAAGAAGCAACCAAAAATTTCGATGAGAACTATCATGTCGGCAATGGTGGATTTGGGAAGGTGTTCATGGGACAGCTCAAAGACGGTACGATGATTGCGATCAAGAAAGCAAATCCTCAGTCCAATCAAGGCATTGCCGAGTTCCAGAATGAGATCAAATTCTTATCGAAACTTCGTCACCAAAATCTAGTCTCTCTTCTCGGATACTGCTGCGAGTATAACCAAATGGTCCTGGTTTATGCCTACATGGCAAACGGATCTCTCGACGGCCATCTCTACGGGAAAAAAGCCGTCGTCCCTCTCTCGTGGAAGCAAAGGCTTGAAATCTGCATAGGAGCAGCCGCTGGGCTTCATTATCTTCACACAGGTTTAGGTGGTTGTGAAAGCATAATACACAGGGACGTGAAGGCAGCTAATATTCTTTTGGATGAGAATTTGGTGGCCAAAGTTTCAGACTTTGGGATCTCACGGAGGGGCCCATCTTCAGATAAGTCCCATGTGAGCACTGTTGTGAAGGGAAGCTTCGGTTACTTAGATCCTGAGTACTTCAGAACGCAGCGTTTGACAGAGAAATCAGATGTGTACTCATTTGGGATGGTGCTTTTGGAAGTTCTATGCGGGAGGCCTGCTCTGAATCGTGCCCTGCCTGACGAAGCAAAGAATCTGGCAAACTGGGCTCTGACAAAGGTTGAAGACGATGAATCATCACTGGAAGAGATAATAGACGCGAGTCTAATTGGTGACGCGAAACATGAATCTGTGAAGAAGGTTTGGGAAGTGGCTAAGATGTGTTTGGAAGGGAAAAGGATCATCAGGCCAACAATGAGATACGTCATGTCTGGTTTACAGGATGCTCTCCATCTTCATCTCAATGCAGAAGCCCTAGCTATCTAG 1659 0.4448 MYRLNMGGHSVVPSQNSTLFRVWEEDDKYLQPNPLASNMSVNPFSIKSSSNDFGSSEVAPADVYATAKALTNISSKSNLTWVFPVNPKFKYILRMHFCDIISKSRNSLFFNVYVNSEVLMKNLSLSAFTYDVGVPYVIDYVNNNISEEASDKLSVTVETGGPEQGLNAISNGLEILKMSNEVRSLDGLSSVDNIFAKSDQKIPKLALIISSCGMAALCLSACVIYYFYGRIRAGKSNRTWSNSEGRLRIFTFEEIQEATKNFDENYHVGNGGFGKVFMGQLKDGTMIAIKKANPQSNQGIAEFQNEIKFLSKLRHQNLVSLLGYCCEYNQMVLVYAYMANGSLDGHLYGKKAVVPLSWKQRLEICIGAAAGLHYLHTGLGGCESIIHRDVKAANILLDENLVAKVSDFGISRRGPSSDKSHVSTVVKGSFGYLDPEYFRTQRLTEKSDVYSFGMVLLEVLCGRPALNRALPDEAKNLANWALTKVEDDESSLEEIIDASLIGDAKHESVKKVWEVAKMCLEGKRIIRPTMRYVMSGLQDALHLHLNAEALAI 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4034g00002 552 FunFam Wall-associated receptor kinase 2 338 550 - -
Pral4034g00002 552 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 138 538 - -
Pral4034g00002 552 Gene3D Transferase(Phosphotransferase) domain 1 338 548 - -
Pral4034g00002 552 FunFam Receptor-like protein kinase FERONIA 1 180 - -
Pral4034g00002 552 CDD STKc_IRAK 268 533 - -
Pral4034g00002 552 Gene3D - 1 179 - -
Pral4034g00002 552 Gene3D Phosphorylase Kinase; domain 1 233 337 - -
Pral4034g00002 552 SUPERFAMILY Protein kinase-like (PK-like) 239 535 IPR011009 -
Pral4034g00002 552 SMART serkin_6 262 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4034g00002 552 ProSiteProfiles Protein kinase domain profile. 262 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4034g00002 552 FunFam receptor-like protein kinase FERONIA 230 337 - -
Pral4034g00002 552 Pfam Protein tyrosine and serine/threonine kinase 267 535 IPR001245 GO:0004672|GO:0006468
Pral4034g00002 552 ProSitePatterns Protein kinases ATP-binding region signature. 268 291 IPR017441 GO:0005524
Pral4034g00002 552 Pfam Malectin-like domain 2 177 IPR024788 -
Pral4034g00002 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4034g00002 Pral-Chr4034 7779 9437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4034g00002 1 544 Receptor kinase-like Gene Family AT2G21480 47.396 6.43e-160 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral4034g00002 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4034g00002 - - pcin:129313295 716.072