Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4032g00032 ATGACATTTGATCGATCGAAGATGAGGAACCTCGAGTTTTATTACTCTCTCATTCTTCTTCTGTTCATAATTCATTCATCCTGCTCTACGTCCACAGATGCTCCTCTTGATAGTTACTTCATTGCTTGCGGTTCTTCCAATAACATTACTCATCTTCATCGTACCTTTGTTCCTGATTCTCAACAACCCTCTGTTACATTTGATTCTGAACATTCTGATATTATTAATTCTTCTAGAACTTTCTCCCCGATTTACCAATCTGCTAGAACTTTCTCAACCTCAGCTTCTTACAACTTCGACATGAACCACAAAGGCTGGCATTTCGTCCGACTCTACTTTTATCCTCTTTCCAAAACGTTGGCTTCAGCCTCGTTCAGTGTTGTCGCTGGAAGCTATGTCCTCCTTGATCGCTTTAGCTTTAACACCTCTAAACACAATAGTACTTACTTGTTCAAGGAGTTTGTGATTTATGTCAGTACTGACATTTTAATCCTCACTTTTGTTCCTTTTAGAGACTCCGATGTTGCATTTGCGAATGCCATTGAGGTTGTTTCTATCCCAGATAAGATATTCTCTTTTGGTCACACCTTATCTTTTCCAAAATTGAAAGATACTGCTCTTGAAACCATGTATCGCTTGAACATGGGAGGCCACTCTTTAGTCCCTTCCCAAAACAGCACTCTTTTCAGAGTTTGGGAAGAGGACGATAAGTATCTCCAGCCTAACCCTTTAGCTTCAAATATATCAGGGAACCCATTCTCCATAAAGTCTTCATCCAACGACTTCGTGTCTTCCGAGGTAGCACCTGCAGATGTTTATGCCACCGCAAAAGCCTTGAAAAACATTTTGAGCAAGTCCAATTTGACTTGGGTCTTCCCAGCGAGTCCAAATTTCAAATACATACTGAGGATGCATTTCTGCGATATAATAAGCAAGTCCAGAAACAGCTTGTTTTTCAATGTGTACGTAAACTCCGAGGTTGTGATGAAAAATCTGAATCTATCAGCCTTTACCTATGATATTGGTGTTCCATACGTGATCGACTATGTCACCAATAATACTTCTGAAGAAGATTCAGATAACTTGAGTGTGACTGTGGAAGCTGGTGGCCTTGAGCAGGGCCTTAATGCTATCTTGAACGGGCTAGAGATTCTGAAAATGAGCAACGACGTTAGAAACTTGGATGGGCTTTCCTCAGTTGACGATATATTTTCTAAGTCAGATCGGAACATTCCAAGAGTAGCATTAATCATTTCGAGCTGTGGCATGGCAGCTTTGCTTTTGTTCGCATGTGTTATTTATTACTTTTATGGTCGCATAAGAGCTGGCAAGTCCAACATCACTCTTTCAAACAACGAAGGAAGACTCAGAATATTCACGTTCGAGGAGATTCAAAAAGCAACCAACAATTTCGATAAGAGCTATCATGTCGGCAATGGTGGGTTTGGGAAGGTGTTCATGGGACAGCTCAAAGACGGTACGATGATTGCGACGAAGAAAGCAAATCCTCAGTCCAATCAAGGCATTGCCGAGTTTCAGAACGAGATCAAATTCTTATCGAAACTTCGTCACCAAAATCTCGTCTCTCTTCTTGGATATTGCTACGAGGACAACCAAATGGTTCTGGTTTATGCCTACATGGTAAACGGATCTCTGGACGACCTTCTGTACGGGAAAAACGTCGTCGTCCCGCTCTCATGGAGGCAAAGGCTTGAAATCTGCATAGGAGCAGCCACTGGGCTTCATTATCTTCACACAGGTACGGGTGGTTGTCAAAGCATAATACACAGAGACGTGAAGGCGGCGAATATTCTGTTGGATGAGAATTTGGTGGCCAAAGTTTCAGACTTTGGGATCTCACGGAGTGGCCCATCTTCAGATAAGTCCCATGTGACCACTGTTGTGAAGGGAAGCTTCGGTTACTTAGATCCTGAGTACTTCAGAACGCAGCGTTTGACAGAGAAATCAGATGTGTACTCATTTGGGATTGTGCTTTTGGAAGTTCTATGTGGGAGGCCTGCTCTGAATCGTGCCCTACCTGTCGAAGCAAAGAATCTGGCAAACTGGGCTCTGAGAAAAGTTGAAAATGATGAATCATCACTGGAAGAGATAATAGACGCGAGGCTAATTGGTGACGCGAAACGTGAATCTGTGAAGAAGGTTTGGGAAGTGGCTAAGATGTGTTTGGAAGGAAAAAGGATCAAGAGGCCAACAATGGGATACGTCATGTCTGGTTTACAGGATGCTCTCCACCTTCATCTCCATACAGAAGCCCTAGCTAGCTACTGA 2289 0.4277 MTFDRSKMRNLEFYYSLILLLFIIHSSCSTSTDAPLDSYFIACGSSNNITHLHRTFVPDSQQPSVTFDSEHSDIINSSRTFSPIYQSARTFSTSASYNFDMNHKGWHFVRLYFYPLSKTLASASFSVVAGSYVLLDRFSFNTSKHNSTYLFKEFVIYVSTDILILTFVPFRDSDVAFANAIEVVSIPDKIFSFGHTLSFPKLKDTALETMYRLNMGGHSLVPSQNSTLFRVWEEDDKYLQPNPLASNISGNPFSIKSSSNDFVSSEVAPADVYATAKALKNILSKSNLTWVFPASPNFKYILRMHFCDIISKSRNSLFFNVYVNSEVVMKNLNLSAFTYDIGVPYVIDYVTNNTSEEDSDNLSVTVEAGGLEQGLNAILNGLEILKMSNDVRNLDGLSSVDDIFSKSDRNIPRVALIISSCGMAALLLFACVIYYFYGRIRAGKSNITLSNNEGRLRIFTFEEIQKATNNFDKSYHVGNGGFGKVFMGQLKDGTMIATKKANPQSNQGIAEFQNEIKFLSKLRHQNLVSLLGYCYEDNQMVLVYAYMVNGSLDDLLYGKNVVVPLSWRQRLEICIGAATGLHYLHTGTGGCQSIIHRDVKAANILLDENLVAKVSDFGISRSGPSSDKSHVTTVVKGSFGYLDPEYFRTQRLTEKSDVYSFGIVLLEVLCGRPALNRALPVEAKNLANWALRKVENDESSLEEIIDARLIGDAKRESVKKVWEVAKMCLEGKRIKRPTMGYVMSGLQDALHLHLHTEALASY 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4032g00032 762 CDD STKc_IRAK 477 742 - -
Pral4032g00032 762 Pfam Protein tyrosine and serine/threonine kinase 475 744 IPR001245 GO:0004672|GO:0006468
Pral4032g00032 762 Gene3D Transferase(Phosphotransferase) domain 1 547 758 - -
Pral4032g00032 762 SMART serkin_6 471 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4032g00032 762 SUPERFAMILY Protein kinase-like (PK-like) 448 744 IPR011009 -
Pral4032g00032 762 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 243 748 - -
Pral4032g00032 762 FunFam receptor-like protein kinase FERONIA 438 546 - -
Pral4032g00032 762 ProSiteProfiles Protein kinase domain profile. 471 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4032g00032 762 FunFam Receptor-like protein kinase FERONIA 206 389 - -
Pral4032g00032 762 FunFam Wall-associated receptor kinase 2 547 761 - -
Pral4032g00032 762 Pfam Malectin-like domain 41 386 IPR024788 -
Pral4032g00032 762 Gene3D - 38 186 - -
Pral4032g00032 762 Gene3D - 205 390 - -
Pral4032g00032 762 Gene3D Phosphorylase Kinase; domain 1 443 546 - -
Pral4032g00032 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4032g00032 Pral-Chr4032 408760 411048 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4032g00032 35 753 Receptor kinase-like Gene Family AT4G39110 44.141 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral4032g00032 Malectin_like 4.2e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4032g00032 - - pcin:129313295 965.296