Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4032g00025 ATGGGCGTGCTGGAACTGTCCATGTGGATGCAATTTGCTTTGGCTTTTCTTCTAGGCATGGGTAATGAGTCATCTTCCTTATCCATACCTATTGATAATTTCTTGCTCGCTTGTGGTTCTTCTGTGAACATAACCTTTCAGGGTCGCACTTTTTCTCCTGAATCTGTCTATGAGAAGCACAGATTAGAATTGAAAACCCAGAAATCTGTTGTTGTAACCTCTGATTCTGGCTCACCGACTTCAGTCTACCAGTCAGCTAGAATCTTTTGGAGCAATGCTTCATATATATTCAGAATTGTGCGACCAGGCCAGCATTGGATTCGCCTTTACTTCTCCCCTTTGCCCAACTTTCATCAGAACATGTCCTCTGCCTCAATAACAGTCATCACTGATGGAATTGTCCTTCTCAGTGATTTCAGTTTCATCACCTATGGTGGTTCTTACCTTTTCAAGGAGTACGTAACCAATATTACATCTCCTAGTTTGTCTCTCACATTCATCCCTTCCAGAAATTCATTTGTCTTTGTTAATGCCATTGAAGTTGTCTCTGTACCTGAAGATATCTTTGTTAATGTAATCGATATTACATCAGTTTTTATGGAGAATTCTTCAGACCTGGTCCTTGAAACTGTTTACCGTTTGGATGTGGGCAATGAATCTCTCACCACCAGGAACGATGACCTTGGTCGAAACTGGGAAGGTGATGAAAAGTACATGGCCTCCAATAATAGAGCATTAAATGTTTCAGTTGACACTTCCTCTATAAATTTTGCTTCTCAGACTGAACCTACCATAGCACCAATGTGGGTTTATGCTACAGCCAAAGCCATGGCAGATGAAAGAAGTTTAGATTTAACTTGGGTCTTCTCTGTAAATCCAAACCATACCTATTTTGTTCGGGTGCATTTCTGTGATGTCATAAGCAACTCAAAGAGTCTTACAATTTTCAATCTGTTTATAAATGATGTTGTTTATGAAAGAGTAGACCTTTACTCCATATTTCACAAGTTTTCAGTCCCATTTTACATGGATTTTGTTGTCTACACCAAAAAGCGTGATTTGACACTAAGTGTTGCTCCAGATAGGATGACGAATAGCAGGAATGCAACCATAAGTGGGCTGGAGATAATGGAGATCATCAATGAAGTTAGAATGCTGGATGGAGTGGCGCCCTCTGAGAGTATTCTTCCCAATTCATCCTCAAGAATTGTGAAAGTAGCAAATATACCTGTGCCTGTCATTGGCGTTGCAGCTTTCCTAGTTCTCACTGCAATAAAATTATGTTACATAATAGCTCACAGGTCCAGGGCAAGCTCCAGAACTACTCCCTTATCATGCAGGCTGTTCACCTTACATGAAATCAGTGAAGCAACAAACAGCTTTGACGAGTCTCTGCTTCTTGGAGAAGGTGGTTTTGGCAAGGTCTATGAAGGAACGATGGTTAATGGGATAAAAGTAGCCATCAAAGTAGCCAATCATGAATCAAGGCAGGGTCTTCATGAATTTCAGAATGAGATTAAATTGCTATCCAAGCTTTCTCATTCGAACCTTATCTCTCTAATAGGTTGTTGTAATGAAGACTCACAAATGATTCTTGTCTACGAGTTCTTAGCTAATGGATCTTTAAGCGGCTACCTCTATGGAGCTGGCTTTATTCCTCTTTCATGGAAGCAGCGGCTAGAAATATGCATTGGGACAGCAAAGGGTCTTCATTTCCTTCACACAAGAGTTCCTCGAAGCATAATCCATCGTGATGTTAAGACAACGAATATTCTGTTGGACAAGAATTTAGTTCCAAAAGTTGCTGATTTTGGAATCTCAAGAAAAGGTCCACCTCTTGATAAGAGTCATGTAACAACCTTTGTAAAGGGCAGCTTTGGTTATATTGATCCTGAGTATTTCAGAACAAAATATCTCACTGAGAAATCAGATGCTTTCTCATTTGGGATGGTTCTGATGGAAGTTATCTGTGGCAAGCCTGCTTTGGACAATACTCGTCCAACAGAGCATCTTAATCTGGCAAGATGGGCATCAAGCTGCCAAGAAATGGGCACCTTTCATGAGATTATAGACCCATATTTGAACGGAAAAGTGAACTTAGATTCTCTAAACAAAGTATGTGAATTGGCTTGGAAGTGCTTGGAGGAGAGACGCATAAATAGACCACCAATAGGGTATGTGCTGTGTGAGCTTGAAGATGCTCTCCACATTGAGTTGGCTTCACCAATTCAGCAAGTTTCTGTGGATTGTGCCATCGAAAATGGAATGGAGGATGAAAAGTGCATGAAAAGTGCATGA 2298 0.406 MGVLELSMWMQFALAFLLGMGNESSSLSIPIDNFLLACGSSVNITFQGRTFSPESVYEKHRLELKTQKSVVVTSDSGSPTSVYQSARIFWSNASYIFRIVRPGQHWIRLYFSPLPNFHQNMSSASITVITDGIVLLSDFSFITYGGSYLFKEYVTNITSPSLSLTFIPSRNSFVFVNAIEVVSVPEDIFVNVIDITSVFMENSSDLVLETVYRLDVGNESLTTRNDDLGRNWEGDEKYMASNNRALNVSVDTSSINFASQTEPTIAPMWVYATAKAMADERSLDLTWVFSVNPNHTYFVRVHFCDVISNSKSLTIFNLFINDVVYERVDLYSIFHKFSVPFYMDFVVYTKKRDLTLSVAPDRMTNSRNATISGLEIMEIINEVRMLDGVAPSESILPNSSSRIVKVANIPVPVIGVAAFLVLTAIKLCYIIAHRSRASSRTTPLSCRLFTLHEISEATNSFDESLLLGEGGFGKVYEGTMVNGIKVAIKVANHESRQGLHEFQNEIKLLSKLSHSNLISLIGCCNEDSQMILVYEFLANGSLSGYLYGAGFIPLSWKQRLEICIGTAKGLHFLHTRVPRSIIHRDVKTTNILLDKNLVPKVADFGISRKGPPLDKSHVTTFVKGSFGYIDPEYFRTKYLTEKSDAFSFGMVLMEVICGKPALDNTRPTEHLNLARWASSCQEMGTFHEIIDPYLNGKVNLDSLNKVCELAWKCLEERRINRPPIGYVLCELEDALHIELASPIQQVSVDCAIENGMEDEKCMKSA 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4032g00025 765 CDD STKc_IRAK 467 732 - -
Pral4032g00025 765 Gene3D Transferase(Phosphotransferase) domain 1 537 748 - -
Pral4032g00025 765 ProSiteProfiles Protein kinase domain profile. 461 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4032g00025 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Pral4032g00025 765 Gene3D - 206 380 - -
Pral4032g00025 765 Gene3D - 34 185 - -
Pral4032g00025 765 ProSitePatterns Protein kinases ATP-binding region signature. 467 489 IPR017441 GO:0005524
Pral4032g00025 765 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 277 744 - -
Pral4032g00025 765 FunFam Putative receptor-like protein kinase 33 185 - -
Pral4032g00025 765 SMART serkin_6 461 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4032g00025 765 Gene3D Phosphorylase Kinase; domain 1 427 536 - -
Pral4032g00025 765 Pfam Protein tyrosine and serine/threonine kinase 467 673 IPR001245 GO:0004672|GO:0006468
Pral4032g00025 765 FunFam receptor-like protein kinase FERONIA 429 536 - -
Pral4032g00025 765 Pfam Malectin-like domain 60 378 IPR024788 -
Pral4032g00025 765 SUPERFAMILY Protein kinase-like (PK-like) 439 731 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4032g00025 Pral-Chr4032 335269 337566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4032g00025 29 740 Receptor kinase-like Gene Family AT5G59700 42.133 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral4032g00025 Malectin_like 1.2e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4032g00025 - - pcin:129313301 1095.11