Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4032g00011 ATGCCAGACATTGAGGCTCCAACAACTAACGGATCTGTTCCAGACATTTCTCAGAAGAGGAATCGTCCTGTTACTCTCAAGTTCGAGGATGTTGTGTATAAAATCAAGACCAAGAAACAAGGATTAACAATTTGGAAAAAGGTGAAAGAAGAAGAAAAAATAATCCTCAAAGGAGTGAGTGGCATGATTGAACCAGGTGAAGTTCTGGCCATGCTTGGTCCATCTGGGAGTGGCAAAACAACTCTATTAACGGCCTTGGGAGGCCGGCTCGGAGGAGGGAAGCTTCAAGGGACCATAACCTACAATGGCGACAAGTTCTCTAACTCGATGAAGAGAAACACAGGCTTTGTCACTCAAGATGATGTTCTCTACCCACACTTGACTGTCACAGAAACCCTAGTTTTCACTGCACTCCTCAGACTTCCCAATAGTTTCACCAAACAGGAAAAGATTTTGCAGGCCGAAAGCGTTATAACACAATTAGGTTTAACCAACTGTAAAGATAGCATAATTGGGAACACCCTTTTGAGAGGGGTTTCTGGGGGAGAGAGGAAGAGGGTTAGCATTGGGCAAGAAATGCTGGTAAACCCTAGCTTGCTTTTCCTAGACGAACCTACGTCCGGCCTTGACTCGACCACAGCTCAGAGGATCGTGTCGTGTTTGTGGGAACTAGCCAACAAGGGTAAAACTGTTGTCATGACCATACACCAACCTTCTAGTAGGTTGTATTACATGTTTCATAAGGTTATGTTGCTATCTGAAGGAAGCTCAGTGTACTATGGTAAAGGATCTGAAGCCGTAAAGTATTTTTCTAGTATTGGGTTTTCCCCAGCTGTTGCCATGAACCCTGCAGATTTCCTTTTGGATCTTGCAAATGGTGTCTACTCCAATGAATCAACAGAACATCATGCTTTAATCAAGAGTAAATTGAAATCCGAATACACGAACCGCATTGAGCCTCAATTGAAAGCAGAGCTTCAAGAGAGAGGCGTCTCTGGTCAAAGTCAGCAAGATCGGCCTCAAGACAGAGAATTTGGGAGGTGGCCTACGACATGGAGCCAGCAATTGTTTGTGTTACTTAGAAGAGGAGTCAAAGAGAGAAGGCATGAATCCTTCTCTGGCCTGAGGATTGCTCAGATACTCATAGTTGCAACTATCGCAGGACTTTTATGGTATAAGTCTGATATATCACACTTGCAGGATCAAGTGGGGCTTCTATTCTTTGTTGTAAGCTTCTGGGGCTTCGTCCCTATGTTCCATGCCATCTTCACCTTCCCTCAAGAAAGAATGATGCTTCAGAAAGAACGATCTTCCGGAACTTACAGACTCTCTTCATACTTCATGTCAAGAATCGTGGGTGATCTTCCAATGGAGCTAGTTCTTCCCACGATCTTCCTTACCATCACTTACTGGATGGCAAGCCTAAAACCCAGCCTCTTAAGCTTCTTCTTCACTCTCCTTAGTCTCTTGTTCGCTGTCCTGGTCTCACAAGGCCTAGGCCTAGCCTTAGGTGCTTTGCTCATGGATCAGAAAACAGCAACCACACTTGGCTCTGTCATCATGCTCTGCTTCATGCTGGCTGGTGGGTTCTTCGTTCAAAATGTGCCAAAGTTTATAGCTTGGATCAAGTACGTGTCTATCAGTCATTACACTTTCAAGCTCTTTGTGGGGTCCCAGTATGGTGTTAGGGACACGTACCCTTGTTCTGAAGGGCAGTGTTTGGTTGCAGATTTCCCTTCTATAAAGCAGATGGGGGTTGGTTTGGAAGGCCAAATTGTGGCTGCACTGGCTTTAGGGGTAATGCTGGTAGCTTATAGACTTTTGGCTTATGCTGCTCTTATGAGGATTGGGGTCACAAAGAAATTGAGTTAG 1872 0.4487 MPDIEAPTTNGSVPDISQKRNRPVTLKFEDVVYKIKTKKQGLTIWKKVKEEEKIILKGVSGMIEPGEVLAMLGPSGSGKTTLLTALGGRLGGGKLQGTITYNGDKFSNSMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSFTKQEKILQAESVITQLGLTNCKDSIIGNTLLRGVSGGERKRVSIGQEMLVNPSLLFLDEPTSGLDSTTAQRIVSCLWELANKGKTVVMTIHQPSSRLYYMFHKVMLLSEGSSVYYGKGSEAVKYFSSIGFSPAVAMNPADFLLDLANGVYSNESTEHHALIKSKLKSEYTNRIEPQLKAELQERGVSGQSQQDRPQDREFGRWPTTWSQQLFVLLRRGVKERRHESFSGLRIAQILIVATIAGLLWYKSDISHLQDQVGLLFFVVSFWGFVPMFHAIFTFPQERMMLQKERSSGTYRLSSYFMSRIVGDLPMELVLPTIFLTITYWMASLKPSLLSFFFTLLSLLFAVLVSQGLGLALGALLMDQKTATTLGSVIMLCFMLAGGFFVQNVPKFIAWIKYVSISHYTFKLFVGSQYGVRDTYPCSEGQCLVADFPSIKQMGVGLEGQIVAALALGVMLVAYRLLAYAALMRIGVTKKLS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4032g00011 623 SMART AAA_5 65 256 IPR003593 GO:0016887
Pral4032g00011 623 Pfam ABC transporter 56 207 IPR003439 GO:0005524
Pral4032g00011 623 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524|GO:0016887
Pral4032g00011 623 MobiDBLite consensus disorder prediction 325 345 - -
Pral4032g00011 623 FunFam ABC transporter G family member 22 43 273 - -
Pral4032g00011 623 Pfam ABC-2 type transporter 354 560 IPR013525 GO:0016020|GO:0140359
Pral4032g00011 623 Gene3D - 43 273 IPR027417 -
Pral4032g00011 623 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 609 - -
Pral4032g00011 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 271 IPR027417 -
Pral4032g00011 623 Pfam ABC-2 type transporter 236 304 IPR043926 GO:0140359
Pral4032g00011 623 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 279 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4032g00011 Pral-Chr4032 113858 116753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4032g00011 55 268 Calmodulin-binding Proteins AT2G36910 22.667 7.36e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4032g00011 K05681 - aew:130789625 799.66