Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4028g00016 ATGACTGGCAAAGAGATTCTTCATAAAATAAAGGAAAAAGTTGGATTGTCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCAAAGCAGATAAGTCATGGCTTTCACTTGGTAAAGGGAAAATCAGCTCATGCTATGGAAGATTATCTCGTTGCAAAATTTAAGCAAGTTGATGATCATGAATTGGGTTTGTTTGCAATATTCGATGGCCACATGGGTCATGACGTGGCTGACTACTTACAGTGTCATTTATTTGAAAATATCTTAAAAGAGCCTGACTTCTGGACAGAAACTGGAAAAGCCATCAGGAGAGCATATCGTATAACTGATTCAGCCATTCTAGAGAAAGCATTTGAATTGGGGCCGGGGGGCTCCACCGCAGTCACGGCGATATTGATTGATTGTCAAAAGCTGGTAATTGCTAATGTTGGGGATTCAAGGGCTGTTCTATCCAGGAATGGTGTGGCCAAACAGCTATCAGTGGATCATGAGCCAAGCACTGAAAGAGAGCAGATCGAAAATAGAGGTGGTTTTGTCTCAAACTTCCCAGGGGATGTTCCACGCGTGGATGGGCAGTTGGCAGTGTCCAGGGCATTTGGTGACAAAAGCTTGAAGAATCACCTTAGTTCAGAACCACATGTAGCAGAGGAGATTATAGATGATGCTGAGTTTGTTATACTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATACTATCAAGGATGTAAAGGATGCTCGATCAGCAGCAAAACTTCTTACTGAAGAGGCACTTAACAGGAAGAGCTCAGATGATATCTCCTGTATTGTCTTGAAGTTTCAATGA 843 0.4211 MTGKEILHKIKEKVGLSDPDSGKGKSKMSKQISHGFHLVKGKSAHAMEDYLVAKFKQVDDHELGLFAIFDGHMGHDVADYLQCHLFENILKEPDFWTETGKAIRRAYRITDSAILEKAFELGPGGSTAVTAILIDCQKLVIANVGDSRAVLSRNGVAKQLSVDHEPSTEREQIENRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKNHLSSEPHVAEEIIDDAEFVILASDGLWKVMSNQEAVDTIKDVKDARSAAKLLTEEALNRKSSDDISCIVLKFQ 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4028g00016 280 FunFam Probable protein phosphatase 2C 39 23 280 - -
Pral4028g00016 280 ProSiteProfiles PPM-type phosphatase domain profile. 33 279 IPR001932 -
Pral4028g00016 280 Gene3D - 27 280 IPR036457 -
Pral4028g00016 280 PANTHER PROTEIN PHOSPHATASE 28 278 IPR015655 GO:0004722|GO:0006470
Pral4028g00016 280 SMART PP2C_4 23 277 IPR001932 -
Pral4028g00016 280 Pfam Protein phosphatase 2C 45 272 IPR001932 -
Pral4028g00016 280 CDD PP2Cc 32 279 IPR001932 -
Pral4028g00016 280 SUPERFAMILY PP2C-like 29 279 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4028g00016 Pral-Chr4028 104440 108422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4028g00016 1 280 PP2C-type Phosphatase Gene Family AT3G15260 75.779 3.57e-158 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4028g00016 K17506 - jre:109013230 459.914