Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4028g00013 ATGGCTGATGCAGCGGGTCTAGCTGAGGCAGCAGGATCAAGATTTACTTCCTTGGAGCTTATTGGACAAGGTTCATTTGGTGATGTCTATAAAGCGTTTGACAAGGAGCTCAACAAACAGGTTGCTATCAAAGTGATTGATTTGGATGAATCGGAGGATGAGATTGATGACATTCAGACGGAAATTGCTGTTCTATCACAATGTCGTTGTCCATATATCACTGAGTATTATGGCTCCTATCTCCATCAAACTAAACTTTTTATAATAATGGAGTACATGGCTGGAGGCTCTGTAGCAGACCTACTTCAATCAGGCCAACCCCTTGATGAAGTGTCAATTGCTTGCATTTTACGTGACTTGTTGCATGCTGTTGATTATTTGCACGCTGAAGGAAAAATTCACAGGGACATCAAAGCAGCAAACATTTTATTGTCTGAGAATGGTGATGTGAAGGTTGCAGATTTTGGCGTTTCTGCTCAGCTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTTATTCAGACTGCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAACAATTGAGATGGCAAAAGGGGAGCCTCCACTCAGTGACCTTCATCCCATGAGAGTGCTTTTCATCATCCCCCGTGAGAACCCACCACAGCTAGATGAGCATTTTTCTCGTCCCATTAAAGAATTTGTTTCATTGTGTTTAAAAAAGCTTCCAGCTGAGAGGCCAAGTGCCAAGGAACTTCTCAAACATCGTTTTATTCGAACTGCTAGAAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCCAAGTATCAAATAACAGAAGAGGGGACACCTAGAAATGGTCCAAGAGGTGTAGGGGAGCCATCTGATACGATGAAAGTGGCAAGAGATTTAAGAGAAGAAGCCACTCAATCCATTTCCAGTGGTCAGGGTAAAACTGTGAAGAATTCTGGATGGGACTTCAGCATCAGAGGATCAGAGGGCACTGGAACTTTTCGCAGTGTTGCACGACCACCTCAATATAGAGATAAGAAAACAGATATTTCCCAATATCAACTTGACCAAAATAAGGCAACAGAGAGAGAATATCTTGGGGCATCTTCCTATAGAAGTGCTCTTAATGAATCACCAGAACCTTCCCTTGAAGATTCTAGCAGTAGGCATGCTTCTTTTGAAGATAATTCTTCCAGTGGAACTATTGTTGTCCGTGGTCAGCATGATGATTATGACTCTTCACAGACAGTGAGGTCCAGGCCGGGACTTAATGAGAGAACTGCAAATGCCTCACTTGAAGATAGTGTCTCAAATCTCGCAGAGGCAAAGGCTGCTATCCTAAGGCCAAGAAAAGGAAATACTCGAGAGAGAGTTGCACAGGGAAAGACTGGCAATGATTTGCAGGAAAGCAGAAGAAACCAAGTGACAAGCAGCTCTGATTTCTCAAGATCATCTCGTGTAAACAATGGTCCACAACAGGGAATTTCAAGACTGCGCCATACTGATGATGATCAAGACAACGTCAGAATATTGTCATCCTCTGTGGCATTATCTGTTTTACTTATTCCTTCTTTAAAAGAGGCCTTTGCCAATGATCCAGAAGGGTCTACTGTACAAGAAATAATCAATTCACTCATACACATGGAGCACATAAAGTCTGGATCATGTGATGCTCTGGTCAAAACGTTGCTTCAGAGATTGGCCAGTTCGAAGGAATCTTCATTGAAGGATCTGCAGGGGCTCGCAGCTCAATTATTCACCAAGGCCAAGTCAGCTCCTGAAGAATCCCAAAATGCAACTGCAGAAGTTGATGCCAGGAGGAAACAACAGAACAAAGAACTTCATTCAAATAGCAATCTGGGTCCTCTTGCAAGATTTCTTCTCTCAAGATGGCAAGGTCAAGCCTAA 1950 0.4303 MADAAGLAEAAGSRFTSLELIGQGSFGDVYKAFDKELNKQVAIKVIDLDESEDEIDDIQTEIAVLSQCRCPYITEYYGSYLHQTKLFIIMEYMAGGSVADLLQSGQPLDEVSIACILRDLLHAVDYLHAEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQTAEGYNEKADIWSLGITTIEMAKGEPPLSDLHPMRVLFIIPRENPPQLDEHFSRPIKEFVSLCLKKLPAERPSAKELLKHRFIRTARKSPKLLERIRERPKYQITEEGTPRNGPRGVGEPSDTMKVARDLREEATQSISSGQGKTVKNSGWDFSIRGSEGTGTFRSVARPPQYRDKKTDISQYQLDQNKATEREYLGASSYRSALNESPEPSLEDSSSRHASFEDNSSSGTIVVRGQHDDYDSSQTVRSRPGLNERTANASLEDSVSNLAEAKAAILRPRKGNTRERVAQGKTGNDLQESRRNQVTSSSDFSRSSRVNNGPQQGISRLRHTDDDQDNVRILSSSVALSVLLIPSLKEAFANDPEGSTVQEIINSLIHMEHIKSGSCDALVKTLLQRLASSKESSLKDLQGLAAQLFTKAKSAPEESQNATAEVDARRKQQNKELHSNSNLGPLARFLLSRWQGQA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4028g00013 649 SUPERFAMILY Protein kinase-like (PK-like) 12 306 IPR011009 -
Pral4028g00013 649 MobiDBLite consensus disorder prediction 385 515 - -
Pral4028g00013 649 Coils Coil 48 68 - -
Pral4028g00013 649 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 602 - -
Pral4028g00013 649 MobiDBLite consensus disorder prediction 318 372 - -
Pral4028g00013 649 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4028g00013 649 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4028g00013 649 MobiDBLite consensus disorder prediction 318 345 - -
Pral4028g00013 649 MobiDBLite consensus disorder prediction 603 631 - -
Pral4028g00013 649 FunFam serine/threonine-protein kinase dst1 isoform X1 12 299 - -
Pral4028g00013 649 MobiDBLite consensus disorder prediction 406 450 - -
Pral4028g00013 649 MobiDBLite consensus disorder prediction 284 306 - -
Pral4028g00013 649 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4028g00013 649 CDD STKc_MST3_like 13 287 - -
Pral4028g00013 649 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pral4028g00013 649 MobiDBLite consensus disorder prediction 472 510 - -
Pral4028g00013 649 Gene3D Transferase(Phosphotransferase) domain 1 12 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4028g00013 Pral-Chr4028 75562 85535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4028g00013 1 649 MAP Kinase Kinase Kinase Kinase AT3G15220 59.599 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pral4028g00013 Pkinase 5e-68 CL0016