Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4027g00017 ATGGTTAGAATGCCTAATATTCAAAGGAGGCTTCGTCGAGCAAGAGTTCTTCTAGTGCTTGACGATATAGACACTCCCAGTCATTTGCAATATCTTATTGAAGAAAATCTTTCATTGGGACCAAAAAGCAAAGTCATCATTACAAGTAGAGACAAACATGTTCTTATTAGTAGAGGAGTTCATAAAGTACATGAGGTGAAAGAATTAAACAATGAAGAGTCGCTTCAACTTTTTTGTCGGCAGGCTTTCAAGCAAGGCTATCCTAAACAAGGATATGAAAAGTTATCGGTACAGGCAATTGAATATGCAAAAGGACTTCCTCTGGCATTAAAAGTTCTGGGTTCATTTTTGAACTCCAGGAATATAAAAGTATGGGAGAGTGCCCTTAGAAAATTGAGAAAGTATCCAAATAGAGAAATTCAAACAGTATTGAGAGTGAGCTATGATGGACTTGAGACACCAGAAAAGGGGATATTTTTAAATATTGCATTCTTCTTCAGGGGAGAAAAGAAAGAAGATATTATGAGGGTGCTAGATGCTTGTAACGATGGCCTCTACGTAGATATTGGAATAGATAGGCTTCTAGATACAGCACTCATAACTATTTCAAGTGACAATAGAGTAGAAATTCATGATGTGCTACAAGAAATGGCTGAAGAAATAGTTCGTGAGGAATCTAGAGAGCACCCTGAATGTCGAAGTCGATTAAATGATGCAAAAGAAGTTCAAGATATACTTGAAAATAACAAGGGAACTGATATAATTGAAGGCATTGCGTTGAACACACATGAGTTAAAAAGTGACATACCCTTGAGTGCTGATGCTTTTAGAAGAATGAAATCACTTCCTAATAAACTAAGATATTTTTGTTGGAGGCACTATCCTTTGAAGACTCTGTCACTTGGTTTTTGTGCGGACAAACTTGCTGAAATCCAAATGTATGATAGCAATATTGTAAAACTATCGGATGGTGTGCAGGATATTATGAATTTGAAGATAATAAATCTTGCCCATTCGTGGATGTTACAGGAGTTGCCTGATTTCTCCATGGCACAAAATCTTGAAATAATGGACCTCAGCTATTGTCAAAGTTTATGTAGTATTCATCCATCAATCTTGTCTCTTCCTAAACTTGTTTCTTTGAATCTAAAAGGGTGCATCAAACTAAAGAGTCTTCACTCGGATAACCATTTGAAATCTCTCAAGGAACTCAAGCTGACGCGCTGCTATACTTTGGAGGAGTTTTTGTTGTCATCAGAAGAAATGAGAAGTTTACATTTGAATGGTACAAGTATCAAAACATTAAACTTGCCAGTTGGATGGTTCAATAAACTTGAAGAGCTATATCTCAGTGGGCCTCTTAGGAGTTTTCAAGTAAATGAGCTAAGTTGTTTGACATCACTTAAAATATTCTCTCTTTATTGTTTTGAAGGAGTAATAGACAAATCAAAATTACTCATTCTATTTGATGCCTGGTGTTCCTTAGAAGAATTGCATGTAAAATACTGTGAGGTTTCTGAGATCCCTGACAATATCAGTGCCATGTCATTGTTGAAGATTCTATCACTAGAAGGAAGCAGCGTGAAGAGTTTGCCAAATAGCATCAAGCATCTTTCAGAGCTCAGAAAAATTGATTTGAGTGGATGCAAGAGGCTTAGGTCCTTACCAGAACTTCCATCTTCCCTTATTTATTGTTACCTCACTGACTGCCCATCACTGGAGAGCTTTGGTTTTCCACTAATGCGAGCAATACATAACTCTAGTGAGCTTAGAGTTTGTTATCCTGGAAGCACAATTCGAGGAGGGGGCTTCAAATATTCTCAGACCGCTAAGAGTTCCATTAGTATTGAGCTTGCACCAGCTTCTTCTGACTATTTATTGGGTTTCGCTTCTTGTTGTATTATTTCCGCATTGGGTTGGCCACGAGTTGATAGAAAATTCCACTTTGATGATGAAAAGATCTATTACAGGGGTGATGACAAACCCAGTTTCTTTGGGAATCTGAGTACAGATCATGTTTTGTTATGGTATGATCCAGTGGATCGCATGTTGAAGGAAAACCGAAGAAGGCAATTTGATGAGGGCGCCACTTGCAAAATGGATTTTACTGTTGGACTTGCTATATTCTTAACATCCCCCGTCAAACTGGGCCTGGGTGAGGGAAGAAGGCCTAGTTTGTCTCTGAAGGCCCAGAACCGAGAATAG 2205 0.3814 MVRMPNIQRRLRRARVLLVLDDIDTPSHLQYLIEENLSLGPKSKVIITSRDKHVLISRGVHKVHEVKELNNEESLQLFCRQAFKQGYPKQGYEKLSVQAIEYAKGLPLALKVLGSFLNSRNIKVWESALRKLRKYPNREIQTVLRVSYDGLETPEKGIFLNIAFFFRGEKKEDIMRVLDACNDGLYVDIGIDRLLDTALITISSDNRVEIHDVLQEMAEEIVREESREHPECRSRLNDAKEVQDILENNKGTDIIEGIALNTHELKSDIPLSADAFRRMKSLPNKLRYFCWRHYPLKTLSLGFCADKLAEIQMYDSNIVKLSDGVQDIMNLKIINLAHSWMLQELPDFSMAQNLEIMDLSYCQSLCSIHPSILSLPKLVSLNLKGCIKLKSLHSDNHLKSLKELKLTRCYTLEEFLLSSEEMRSLHLNGTSIKTLNLPVGWFNKLEELYLSGPLRSFQVNELSCLTSLKIFSLYCFEGVIDKSKLLILFDAWCSLEELHVKYCEVSEIPDNISAMSLLKILSLEGSSVKSLPNSIKHLSELRKIDLSGCKRLRSLPELPSSLIYCYLTDCPSLESFGFPLMRAIHNSSELRVCYPGSTIRGGGFKYSQTAKSSISIELAPASSDYLLGFASCCIISALGWPRVDRKFHFDDEKIYYRGDDKPSFFGNLSTDHVLLWYDPVDRMLKENRRRQFDEGATCKMDFTVGLAIFLTSPVKLGLGEGRRPSLSLKAQNRE 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4027g00017 734 SUPERFAMILY L domain-like 211 574 - -
Pral4027g00017 734 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 416 IPR044974 GO:0006952
Pral4027g00017 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 161 IPR027417 -
Pral4027g00017 734 Gene3D Ribonuclease Inhibitor 413 594 IPR032675 -
Pral4027g00017 734 FunFam Disease resistance protein (TIR-NBS-LRR class) 70 152 - -
Pral4027g00017 734 Pfam NB-ARC domain 6 138 IPR002182 GO:0043531
Pral4027g00017 734 Gene3D - 3 63 IPR027417 -
Pral4027g00017 734 Gene3D - 68 152 IPR042197 -
Pral4027g00017 734 Gene3D Ribonuclease Inhibitor 200 412 IPR032675 -
Pral4027g00017 734 PRINTS Disease resistance protein signature 10 24 - -
Pral4027g00017 734 PRINTS Disease resistance protein signature 536 552 - -
Pral4027g00017 734 PRINTS Disease resistance protein signature 103 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4027g00017 Pral-Chr4027 148155 151057 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4027g00017 7 575 WRKY Transcription Factor Family AT5G45050 31.290 1.51e-60 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4027g00017 - - pcin:129311144 766.533