Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4027g00015 ATGGAGCCAAAGCACCTTATTGGAATTGAGAAAGATTTGACTGATATTGAATTATTTATGAAAGATGAATCACACAAAGTTAGAGTTCTTGGAGTTTGGGGTAAAGGAGGAATAGGCAAAACCACCTTAGCTTGTGCCGCGTTTGATAAATTTTACCACCGATTTGGTAGGTCTTACTTTACTGAAGATGTGAGAGAGGAATCAAAAAAGAATGGAATAAATTGTTTGGTTGAAAAAATTCTCTCTATTCTTCTAGATGAAAAAAGGCCGAGAATGATTGGAATGCCTAATATTCAGAGGAGCCTACGTAGAACAAGAGTTCTTCTAGTTCTTGATAATGTAGACACCTCAAGTCAATTACTTTCTCTTATTGAAGAAAATCTTCTATTAGGACCAAGTAGCAAAGTCATCATAACAAGCAGAGACAAGCATGTTTTTGTTAGTGGAGGAGTTCATGAAGTACATAAGGTGGAAGAATTAAAAAGGGAAGAATCGCTTCAACTTTTTTGCTGGCATGCTTTCAAGCAAGGCCATCCCAAACAAGGATATGAAGAGTTATCAGTGCAGGTAATTGACTGTGCAAAAGGTCTTCCTCTGGCATTAAAAGTTTTGGGTTCATATTTGAACTCTAGAAATACAAAAGCATACGTGAGTGCCCTTAAAACATTGAGAAAGTATCCAAATAGGGAAATTCAAATTGTACTAAGGGTAAGCTATGATGGACTTGATATACCAGAACAGAGGATATTTTTAAATATTGCATTCTTCTTCAGGAGAGAAAAGAAAGAAGATATTATGAGAGTGCTAGATGCTTGTGATGATGACCTCTATGTGGATATTGGAATGGATAGGCTTCTAAAGAGAGCACTCATAACAATTTCAAGTGACAGCAGAGTAGAAATTCATGATCTGCTACAAGAAATGGCTGAAGAAATAGTTCGTGAGGAATCTAGAGAGCATCCTGAAAGTCGAAATAAACTTGTTGAAATCCATATGCATCGTAACGATGCTGTAAAACTATGGGATTGTGTGCAGATTCTATCACTACAAGAAAGCAGCGTTAAGAGTTTGCCAAATAGCATCAAGCATCTTTCAGAGCTTAGAGAACTTCATTTGAGTGAATGCAGGAGGCTTAGGTCCTTACCAGAACTTCCACCTTCTCTTACTTATTGTTATCTTGATGAATGCCAGCCACTGGAGACCTTTGGTTTCGCACTGATGCGAGCAATACAAAACTCTAGTGAGGTTAGATTTTGTTATCCCGGAAGCATAATCCCAGGGGGCTTCAAATATTCTCAGACCGCTAAGAGGTCCATTAGTATTGATCTTACACCAGCTTCTTCTGACCATTTATTGGGTTTCGCTTCTTATTGTATTGTTTCCGCATCGCTGATCGACTATTTACCACTAGTCTATAGAAAATTCCACTTTGAAGATGAAAAGATCTATTACAGGTGTGACAGCAAACTCCGTTACCTCAGGTATATGAGTACAGATCATGTTTTGTTATGGTACGATCCAGTGGATCACGTGTTGAGGGAAAACCAAAAAAGGTGA 1557 0.3796 MEPKHLIGIEKDLTDIELFMKDESHKVRVLGVWGKGGIGKTTLACAAFDKFYHRFGRSYFTEDVREESKKNGINCLVEKILSILLDEKRPRMIGMPNIQRSLRRTRVLLVLDNVDTSSQLLSLIEENLLLGPSSKVIITSRDKHVFVSGGVHEVHKVEELKREESLQLFCWHAFKQGHPKQGYEELSVQVIDCAKGLPLALKVLGSYLNSRNTKAYVSALKTLRKYPNREIQIVLRVSYDGLDIPEQRIFLNIAFFFRREKKEDIMRVLDACDDDLYVDIGMDRLLKRALITISSDSRVEIHDLLQEMAEEIVREESREHPESRNKLVEIHMHRNDAVKLWDCVQILSLQESSVKSLPNSIKHLSELRELHLSECRRLRSLPELPPSLTYCYLDECQPLETFGFALMRAIQNSSEVRFCYPGSIIPGGFKYSQTAKRSISIDLTPASSDHLLGFASYCIVSASLIDYLPLVYRKFHFEDEKIYYRCDSKLRYLRYMSTDHVLLWYDPVDHVLRENQKR 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4027g00015 518 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 329 IPR044974 GO:0006952
Pral4027g00015 518 Pfam NB-ARC domain 20 215 IPR002182 GO:0043531
Pral4027g00015 518 FunFam Disease resistance protein (TIR-NBS-LRR class) 161 243 - -
Pral4027g00015 518 Gene3D - 159 243 IPR042197 -
Pral4027g00015 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 252 IPR027417 -
Pral4027g00015 518 Gene3D - 1 153 IPR027417 -
Pral4027g00015 518 SUPERFAMILY L domain-like 335 401 - -
Pral4027g00015 518 Gene3D Ribonuclease Inhibitor 299 415 IPR032675 -
Pral4027g00015 518 PRINTS Disease resistance protein signature 362 378 - -
Pral4027g00015 518 PRINTS Disease resistance protein signature 29 44 - -
Pral4027g00015 518 PRINTS Disease resistance protein signature 101 115 - -
Pral4027g00015 518 PRINTS Disease resistance protein signature 194 208 - -
Pral4027g00015 518 SUPERFAMILY "Winged helix" DNA-binding domain 230 318 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4027g00015 Pral-Chr4027 125340 127961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4027g00015 7 319 WRKY Transcription Factor Family AT5G45050 33.968 1.46e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4027g00015 - - pcin:129311144 365.155