Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4027g00013 ATGAATCGCACGAAGTTAGAGTTCTTGGAATTTGGGGGCAAAGGAGGAATAGGCAAAACCAGCTTAGCTCGTGCCGCATTTGGTAACTTTTACCACCAATTTGATAGGTCTTGCTTTGCCGAAAATGTGAGAGAGAAATCAAAAACGATTGGAACGAATTGTTTGCTTGAAAAAATTCTCTCTGTTCTACTAGATGAAGAAAAGCTCACAATGGTTGGAATGCCTAATGTTCAAAGGAGGCTACGTAGAACAAGAGTTCTTCTAGTTCTTGATGATGTAGACACGCTTCTTCAATTAAAATATCTTATTGAGGAAAATCTTTCATTGGGACCAGGTAGCAAAGTCATCATTACAAGTAGAGATAAGCATGTTCTTATTAGTGGAGGAGCTCATGAAGTACATGAGGTGAAAGAATTAAATAAGGAAGAATCGCTTCAACTTTTCTGCCGACATGCTTTCAAGCAAGGCCATCCCAAACAAGGATATGAAAAGTTATCAATGCAGGTAATTGAATATGCAAAAGGTCTTCCTCTGGCATCAAAAGTTTTGGGTTCATATTTGAACTCCAGAAATACAAAAGCATGGGAGAGTGCCCTTAAAAAATTGAGAAATGGAGAAAAGAAAGAAGATATTATACAGGTGCTCGATGCTTGTGATGATGACCTCTACGTGGACATTGGAATAGATAGGCTTCTAGATAAAGCACTCATAACTATTTCAAGTCACAGTAGAGTAGAAATTCATGATATGCTACAAGAAATGGCCGAAGAAATAGTTCGTGAGGAATCTCGAGAGCATCCTGAAAGTCGAAGTCGATTAAATGATGCAAAAGAAATCCAAGATGTACCGGAAAATAACAAGGGAACTGATACAATTGAAGGCATTGCATTGAACCCAGATGAGTTAGAAAGCAACATACACTTGAGTGCTGACGCTTTCAAAAAAATGAACAAACTTGTTGAAATTCAAATGCCTTGGAGCAAAGTTGTAAAACTATGGGATGGTGTGCAGAATCTTATGAATTTGAAGATGATAAATCTTTCCTCTTCCTACGAGTTAGAGGAATTGCCTGATTTCTCCATGGCACAAGATCTTGAAATAATGGATCTCAGTTATTGTAAAGGATTATGTCGTATTCATCCATCAATCTTGTCTCTTCCTAAACTTGTTTCTTTGAATCTAGCGGGGTGCATCGAACTAAAGAATCCTCACGGTGATAACCATTTGAAATCTCTCAAGGAGCTCAAGTTGATGTTGTGCCCTGCTCTCAAGGAATTTTTGTTGTCAGCAGAAGAAATGAGAAGTTTACATGTGAAAAGTAAAGGTATCAAAAAGCCAATCTTGCCAGTTGACCGGTTATTAAGCTTTCCATTTGGATGGTTCAATAATCTTGAAGAGCTATGTCTCAATAGACTTCTCAGGAGCTTTCAAGTAAATGAGCTAGGTAGCTTGACATCTCTTAAAGTATTCTCTCTTGATGGTTTTAAAGGCAAACTAGACAAATCAAAATTAGTCATTCTATTTGATGCCTTGCCTTCTTTAGAAGAACTATATTTGACGTACTGCAGGATTCGTCAGATCCCTGACAATATCAGTGCCATGTCATTGTTGAAGATTCTATCACTACAAGGAAGTAGCGTTATGGGTTTGCCAGATAGCATCAAGCATCTTTCAGAGCTCAGAGAAATTGATTTGGGTAAATGCAAGATGCTTAGGTCCTTACCAGAACTTCCACCTTCCCTTGCTTATTGTTATCTCAACGAATGCCAATCATTGGAGACCTTCGGTTTCTCATTGATGCGAGCAATACATAACTCTAGTGAGCTTAGATTTTGTTATCCCGGAAGCACAATCCCAGGGGGCTTCAAATTTTCTCAGACCACTAAGGGCTCCATTAGTATTAAGCTTGCACCAGGTTCTTCTCACCATTTGTTGGGTTTCGCTTCTTGTTGTATTATTTCCCCATCGAGGCTCAAATCTTTGCCACTAGTTGGTAGAAAATTCCACTATGAAGATGAAGAGATCTATTACAAGGTTGACGACAAACTCTCTCGCCACGAGTTTTGGAGTACAAATCATGTTTTGCTATGGTATGATCTAGTGGATCGTATGTTGAAGGAAAACCAAAGAAGGCGATTTGATGAGGGCGCCAATTGCGAGTTTGCATGTGAATTCTTCCACAGAAGTTTCGTCGGTCCTCATGTGGCAAAATATAATAACAGGATAAAAGGGTGCGGAATTTGGCCAATACATGCATCAGAATTGCAGGGGAAAATGGAATTAAGGCTGGAGATGGATGCTGTTACAGACAGTACCAGCCAGCACCCTAATGCTGAAGTGTCCCAACATCAGCCAGCACGTGATTCCGTTAGGAGAAGCACTTGTGTGCGCCAGAGGACAGGGAACTTGACCACTCTGCCTTACTCTGAGAGCCAAGAGATGCCGAAATGA 2451 0.399 MNRTKLEFLEFGGKGGIGKTSLARAAFGNFYHQFDRSCFAENVREKSKTIGTNCLLEKILSVLLDEEKLTMVGMPNVQRRLRRTRVLLVLDDVDTLLQLKYLIEENLSLGPGSKVIITSRDKHVLISGGAHEVHEVKELNKEESLQLFCRHAFKQGHPKQGYEKLSMQVIEYAKGLPLASKVLGSYLNSRNTKAWESALKKLRNGEKKEDIIQVLDACDDDLYVDIGIDRLLDKALITISSHSRVEIHDMLQEMAEEIVREESREHPESRSRLNDAKEIQDVPENNKGTDTIEGIALNPDELESNIHLSADAFKKMNKLVEIQMPWSKVVKLWDGVQNLMNLKMINLSSSYELEELPDFSMAQDLEIMDLSYCKGLCRIHPSILSLPKLVSLNLAGCIELKNPHGDNHLKSLKELKLMLCPALKEFLLSAEEMRSLHVKSKGIKKPILPVDRLLSFPFGWFNNLEELCLNRLLRSFQVNELGSLTSLKVFSLDGFKGKLDKSKLVILFDALPSLEELYLTYCRIRQIPDNISAMSLLKILSLQGSSVMGLPDSIKHLSELREIDLGKCKMLRSLPELPPSLAYCYLNECQSLETFGFSLMRAIHNSSELRFCYPGSTIPGGFKFSQTTKGSISIKLAPGSSHHLLGFASCCIISPSRLKSLPLVGRKFHYEDEEIYYKVDDKLSRHEFWSTNHVLLWYDLVDRMLKENQRRRFDEGANCEFACEFFHRSFVGPHVAKYNNRIKGCGIWPIHASELQGKMELRLEMDAVTDSTSQHPNAEVSQHQPARDSVRRSTCVRQRTGNLTTLPYSESQEMPK 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4027g00013 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 429 IPR044974 GO:0006952
Pral4027g00013 816 Pfam NB-ARC domain 5 207 IPR002182 GO:0043531
Pral4027g00013 816 Gene3D Ribonuclease Inhibitor 233 431 IPR032675 -
Pral4027g00013 816 SUPERFAMILY L domain-like 247 596 - -
Pral4027g00013 816 Gene3D - 8 129 IPR027417 -
Pral4027g00013 816 Gene3D Ribonuclease Inhibitor 432 613 IPR032675 -
Pral4027g00013 816 MobiDBLite consensus disorder prediction 769 796 - -
Pral4027g00013 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 222 IPR027417 -
Pral4027g00013 816 Gene3D - 138 220 IPR042197 -
Pral4027g00013 816 PRINTS Disease resistance protein signature 173 187 - -
Pral4027g00013 816 PRINTS Disease resistance protein signature 8 23 - -
Pral4027g00013 816 PRINTS Disease resistance protein signature 80 94 - -
Pral4027g00013 816 PRINTS Disease resistance protein signature 555 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4027g00013 Pral-Chr4027 114200 117096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4027g00013 13 595 WRKY Transcription Factor Family AT5G45050 26.929 1.76e-45 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4027g00013 - - pcin:129311144 635.565