Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4027g00012 ATGTCAACTTTTACGACTTCTTCCAAAGTTCGGCAGGAAAAATATGATGTTTTTGTTAGTTTTAGAGGTTCAGACATTAGACATGGATTTCTTAGCCATTTGACAAGGCAGTTACGACTAAAGGGCATAGATGTGTATGAGGACGAGAGGTTAGAAAGAGGAGATGAAATATCATCTGCACTTTCGGAAGCAATAGAAAGATCAAGAATTGCGCTGGTGATATTCTCAACAGACTATGCTTCTTCAAGGTGGTGCTTAGAAGAGCTAGAGAAAATCATGGAATGCAAGCGAGTCAATAATCAGATTGTAATCCCAGTTTTCTATAATGTAGACCCATCACACGTTAGGCATCAAGAAGGATCTTATGCATATTCATTTGCTCAGCACAAGCAAAAGTTTAAAGACAACTTGTTGCAATTTTGGAGATCTGTCTTGAAAGAAACTGCAAACTTATCTGGTTATCATCATTCCTCAAATTTTCAAAATGAATCTGATCTTATTGATGGAATAATCAAAGATGTGTCAAAAAAGCTAGAAGGTAAAGACACAATTGAGCCAAAGCACCTTATTGGAATTGAGGAAAATTTTGCTACTATTGAATCATTTATGAAAGACAACTCACAAAAAGTTGGAGTTCTTGGAATTTGGGGTAAGGGAGGGATAGGTAAAACAACCTTGGCTCATGCCACATTTGATAAGTTTTCCCAACAGTTTGATAGTTCTTGCTTCGCAGCAAATGTGAGAGAGGAATCGAAAAAGATTGGATTGACTCGTTTGCTTGAAGAAATTCTCTCAATACTACTAAAAGATGAAAGTATTCTCAAAATCGACGGAATGCCTAATATTCAAAGGAGGCTACGTCGAACAAGAGTTCTTCTAGTGCTTGATGACGTAGACACCCCCAGTCAATTACAATATCTTATTGATGAAAATCTTTCATTGGGAGCAAGTAGCAAAGTCATCATAACAAGTAGAGACAGGCATGTTCTTATTAGTGGGGGAGTTCATGAAGTTCATGAGGTGAAAGAATTAAGCAAGGACAAATCGCTTCAACTTTTTTGCCGGTATGCTTTCAAGCAGGGCCATCCCAAACAAGGATATGAAAAGTTATCACTGCAGGTAATTGAATATGCAAAAGGTCTTCCTCTGGCATTAAAAGTTTTGGGTTCATATTTGAACTCTAGAAATACAAAAGCATGGGAGAGTGCCCTTAAAAAATTGAGAAAGTATCCAAATAGGGAAATTCAGACTGTATTGAGGGTGAGTTATGATGGACTTGATATACCAGAAAAGGAACTATTTTTAAATATTGCATTCTTCTTCAGGGGAGAAAAGAAAGAAGATATTATGAGGGTGCTAGATGCTTGTGATCATAACCTCTACGTGGACATTGGAATAGATAGGCTTCTAGATAAAGCACTCATAATTATTTCACGTGGCAGTAGAGTAGAAATTCATGATATGCTACAAGAAATGGCTGAAGAAATAGTTCGTGAGGAATCTAGAGAGCACCCTGAAAGTCGAAATCGATTAAATGATGCAAAAGAAGTTCAAGATATACTGGAAAATAACAAGGGAACTGATATAATTGAAGGCATTGCATTGAATCCACATGAGTTAAAAAGCGACATACACTTGAGTGCTGATGCTTTTAGTAGAATGAGTAATTTAAGATTTCTCAAGATTGATCGTAATTTTCAAGGCAAATATCAAGTGCTTTTCCCTTTTGGTTTAGAGTCACTTCCTAATAAACTAAGATATTTTTGTTGGAACAATTATCCATTGGAGACTCTACCGCTTGGTTTCTGTGCAAACAAACTTGTTGAAATCCAAATGCCTTGTAGCGATCTTGTAAAACTATGGGATGGTGTGCAGAAGTTAAAGGAGTTGCCTAGTTTTTTCAAAGCACAAAATCTTGAAATAATGGACTTCGGACATTGTAAAAGTTTATGCAGTATTCATCCATCAATCTTGTCTCTTCCTAAGCTTGTTTCTTTGAATCTAGAGGGGTGCAACAAATTAAAGAATCTTCATGGGGATAACCATTTGAAATCTCTCAAGGAACTCAAGCTGACAGGCTGCTTTGCTCTCGAGGAATTTTTGTTGTCATCAAAAGAAATGAGAAGTTTACATTTGGAATATGTAGGTATTGAAACATTAAACTTGCCAGTTGGACGGTTCAATAAACTTGAAGAGCTATATCTTAGTGGGCCTCTCAGGAGCTTTCAAGTAAATGAGCTAAGTTGCTTGACATCTCTAAAGAAATTTGTTCTTTTCAGTTTTGAAGAAAGAATTGAAAAATCAAAATTAGTCACTCTGTTTGATGCCTGGCGTTCTTTAGAAGAACTGTATTTGACGTACTGCGTGATTTGTGAGATCCCTGACAATATCAGTGCCATGTCATTGTTGAAGAGTCTATCACTACGTGGAAGCAACGTTAAGAGTTTGCCAAATAGCATCAAGCATCTTTCAGAGCTCAGAGAAATTGATTTGGGTGAATGCAAGAGGCTTAGGTCCTTACCAGAACTTCCACCTTCCCTTGCTTATTGTTATCTCAACGAATGCCAATCACTGGAGACCTTCACTTTCCCACTGATGCGAGCAATACATAACTCTGGTGAGGTTAGATTTTGTTATCCTGGAAGCACAATCCCAGAGGGCTTCAAATATTCTCATACCACTAAGAGGTCCATTAGTATTGAGCTTGCACCAACTTCTTCTAACCATTTATTAGGTTTTGCTTCTTGTTGTATTCTTTCCGCATCAGCGACCTACATTTTACCACGAGTTGACAGAAAATTCCACTTTGAAGATGAAAAGATCTATTACAGGGGTGACAACAAACTTTGTCACCTCAAGTATCAGAGTACAGATAATGTTTTGTTATGGTATGACCCAGTGGATCACATGTTGAACGAAAACCAAAGAAGGCGATTTGATGAGGGCGCCACTTACAAGTTTGCATGTGAATTCTTCTCCAGAGATTTCTTTGGTTTTTATCAGGATAAATCTGATGACATGATAAAAGGGTGCGGAATTTGGCCAATATACGCATCAGAAATACAAGAGAAAATGGAATTAAGGCTGGAGATGGGTGCTGCTACCGGCAGTACTAGCCAACACCCTAATGCTGAAGTGTCCCAACATCAGCCAGCACGTGATTCCGTTAGGAGAAGCACTCGTGTGCGCCAGAGGATAGGGAACTTGACCACGATGCCTTACTCTTTGAGAACCAAGAGAGGCCGAAATGAGCGCACGGCCCGAAAGGATAACAAAAGAATCGCTTGA 3288 0.3829 MSTFTTSSKVRQEKYDVFVSFRGSDIRHGFLSHLTRQLRLKGIDVYEDERLERGDEISSALSEAIERSRIALVIFSTDYASSRWCLEELEKIMECKRVNNQIVIPVFYNVDPSHVRHQEGSYAYSFAQHKQKFKDNLLQFWRSVLKETANLSGYHHSSNFQNESDLIDGIIKDVSKKLEGKDTIEPKHLIGIEENFATIESFMKDNSQKVGVLGIWGKGGIGKTTLAHATFDKFSQQFDSSCFAANVREESKKIGLTRLLEEILSILLKDESILKIDGMPNIQRRLRRTRVLLVLDDVDTPSQLQYLIDENLSLGASSKVIITSRDRHVLISGGVHEVHEVKELSKDKSLQLFCRYAFKQGHPKQGYEKLSLQVIEYAKGLPLALKVLGSYLNSRNTKAWESALKKLRKYPNREIQTVLRVSYDGLDIPEKELFLNIAFFFRGEKKEDIMRVLDACDHNLYVDIGIDRLLDKALIIISRGSRVEIHDMLQEMAEEIVREESREHPESRNRLNDAKEVQDILENNKGTDIIEGIALNPHELKSDIHLSADAFSRMSNLRFLKIDRNFQGKYQVLFPFGLESLPNKLRYFCWNNYPLETLPLGFCANKLVEIQMPCSDLVKLWDGVQKLKELPSFFKAQNLEIMDFGHCKSLCSIHPSILSLPKLVSLNLEGCNKLKNLHGDNHLKSLKELKLTGCFALEEFLLSSKEMRSLHLEYVGIETLNLPVGRFNKLEELYLSGPLRSFQVNELSCLTSLKKFVLFSFEERIEKSKLVTLFDAWRSLEELYLTYCVICEIPDNISAMSLLKSLSLRGSNVKSLPNSIKHLSELREIDLGECKRLRSLPELPPSLAYCYLNECQSLETFTFPLMRAIHNSGEVRFCYPGSTIPEGFKYSHTTKRSISIELAPTSSNHLLGFASCCILSASATYILPRVDRKFHFEDEKIYYRGDNKLCHLKYQSTDNVLLWYDPVDHMLNENQRRRFDEGATYKFACEFFSRDFFGFYQDKSDDMIKGCGIWPIYASEIQEKMELRLEMGAATGSTSQHPNAEVSQHQPARDSVRRSTRVRQRIGNLTTMPYSLRTKRGRNERTARKDNKRIA 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4027g00012 1095 Gene3D - 343 427 IPR042197 -
Pral4027g00012 1095 Gene3D - 180 336 IPR027417 -
Pral4027g00012 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 701 IPR044974 GO:0006952
Pral4027g00012 1095 Pfam C-JID domain 879 1021 IPR045344 -
Pral4027g00012 1095 SUPERFAMILY L domain-like 486 860 - -
Pral4027g00012 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral4027g00012 1095 Pfam TIR domain 14 187 IPR000157 GO:0007165
Pral4027g00012 1095 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 180 - -
Pral4027g00012 1095 ProSiteProfiles TIR domain profile. 13 178 IPR000157 GO:0007165
Pral4027g00012 1095 Pfam Leucine Rich Repeat 606 625 IPR011713 -
Pral4027g00012 1095 Gene3D Ribonuclease Inhibitor 520 699 IPR032675 -
Pral4027g00012 1095 Pfam NB-ARC domain 200 416 IPR002182 GO:0043531
Pral4027g00012 1095 MobiDBLite consensus disorder prediction 1034 1061 - -
Pral4027g00012 1095 MobiDBLite consensus disorder prediction 1078 1095 - -
Pral4027g00012 1095 MobiDBLite consensus disorder prediction 1075 1095 - -
Pral4027g00012 1095 Gene3D Ribonuclease Inhibitor 700 871 IPR032675 -
Pral4027g00012 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 436 IPR027417 -
Pral4027g00012 1095 PRINTS Disease resistance protein signature 285 299 - -
Pral4027g00012 1095 PRINTS Disease resistance protein signature 821 837 - -
Pral4027g00012 1095 PRINTS Disease resistance protein signature 212 227 - -
Pral4027g00012 1095 PRINTS Disease resistance protein signature 378 392 - -
Pral4027g00012 1095 FunFam Disease resistance protein (TIR-NBS-LRR class) 345 427 - -
Pral4027g00012 1095 Gene3D - 12 179 IPR035897 -
Pral4027g00012 1095 SMART till_3 14 151 IPR000157 GO:0007165
Pral4027g00012 1095 MobiDBLite consensus disorder prediction 1034 1050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4027g00012 Pral-Chr4027 91883 95610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4027g00012 15 829 WRKY Transcription Factor Family AT4G12020 31.324 2.31e-94 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4027g00012 - - pcin:129311144 1124